EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000003517 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Minus strand
Length
12731 bases
Position
chrKQ557209.1:18871342-18884072
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000004452PARPPF00644.201.7e-3511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000004505-2004-ENSXCOP00000004452667 (aa)--
Gene Model
Click here to download ENSXCOG00000003517's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000003517's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000003517-8839.189ENSXCOG00000009904-9939.189
ENSXCOG00000003517-8838.563ENSXCOG00000009933parp12a9938.563
ENSXCOG00000003517-7884.398ENSXCOG00000003512-9280.674
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000003517-8836.564ENSG00000059378PARP128862.687Homo_sapiens
ENSXCOG00000003517-8968.545ENSAPOG00000015327si:ch73-252i11.17968.545Acanthochromis_polyacanthus
ENSXCOG00000003517-8837.571ENSAPOG00000023485parp12a9937.857Acanthochromis_polyacanthus
ENSXCOG00000003517-8237.760ENSAMEG00000017865PARP129537.760Ailuropoda_melanoleuca
ENSXCOG00000003517-8857.489ENSACIG00000007569-9557.576Amphilophus_citrinellus
ENSXCOG00000003517-7349.798ENSACIG00000007539-7649.798Amphilophus_citrinellus
ENSXCOG00000003517-5962.404ENSACIG00000007422-8159.112Amphilophus_citrinellus
ENSXCOG00000003517-8839.006ENSACIG00000009637parp12a9939.307Amphilophus_citrinellus
ENSXCOG00000003517-9552.475ENSACIG00000007478PARP129952.475Amphilophus_citrinellus
ENSXCOG00000003517-9059.187ENSAOCG00000020326si:ch73-252i11.17958.501Amphiprion_ocellaris
ENSXCOG00000003517-8837.857ENSAOCG00000000472parp12a9938.143Amphiprion_ocellaris
ENSXCOG00000003517-8671.535ENSAPEG00000018306si:ch73-252i11.17366.446Amphiprion_percula
ENSXCOG00000003517-8837.857ENSAPEG00000002783parp12a9938.143Amphiprion_percula
ENSXCOG00000003517-9166.282ENSATEG00000005022si:ch73-252i11.17366.282Anabas_testudineus
ENSXCOG00000003517-8839.454ENSATEG00000017986parp12a9939.454Anabas_testudineus
ENSXCOG00000003517-7243.347ENSAPLG00000006979PARP128944.064Anas_platyrhynchos
ENSXCOG00000003517-8838.947ENSACAG00000016815PARP129938.947Anolis_carolinensis
ENSXCOG00000003517-8835.988ENSANAG00000027023PARP129635.988Aotus_nancymaae
ENSXCOG00000003517-8846.413ENSACLG00000008377PARP129546.413Astatotilapia_calliptera
ENSXCOG00000003517-8964.989ENSACLG00000008401PARP128164.989Astatotilapia_calliptera
ENSXCOG00000003517-8837.090ENSACLG00000005503parp12a9937.375Astatotilapia_calliptera
ENSXCOG00000003517-8572.682ENSACLG00000008412PARP127271.292Astatotilapia_calliptera
ENSXCOG00000003517-9043.884ENSAMXG00000000821-7844.462Astyanax_mexicanus
ENSXCOG00000003517-8840.373ENSAMXG00000001021parp12a9940.373Astyanax_mexicanus
ENSXCOG00000003517-9439.105ENSAMXG00000031050-6639.105Astyanax_mexicanus
ENSXCOG00000003517-8851.290ENSAMXG00000018396si:ch73-252i11.19649.164Astyanax_mexicanus
ENSXCOG00000003517-8837.613ENSAMXG00000043787parp12a9837.915Astyanax_mexicanus
ENSXCOG00000003517-8836.176ENSBTAG00000016546PARP129636.618Bos_taurus
ENSXCOG00000003517-8836.070ENSCJAG00000013351PARP129636.070Callithrix_jacchus
ENSXCOG00000003517-8936.618ENSCAFG00000003997PARP129636.618Canis_familiaris
ENSXCOG00000003517-8936.618ENSCAFG00020022200PARP129636.618Canis_lupus_dingo
ENSXCOG00000003517-8836.484ENSCHIG00000014673PARP129636.780Capra_hircus
ENSXCOG00000003517-7837.983ENSTSYG00000004008PARP129637.793Carlito_syrichta
ENSXCOG00000003517-7340.784ENSCAPG00000009108PARP128840.150Cavia_aperea
ENSXCOG00000003517-7341.651ENSCPOG00000011210PARP128940.993Cavia_porcellus
ENSXCOG00000003517-8836.270ENSCCAG00000032426PARP129636.270Cebus_capucinus
ENSXCOG00000003517-8836.603ENSCATG00000029372PARP129636.603Cercocebus_atys
ENSXCOG00000003517-8137.964ENSCLAG00000002012PARP129637.964Chinchilla_lanigera
ENSXCOG00000003517-8836.603ENSCSAG00000008282PARP129636.603Chlorocebus_sabaeus
ENSXCOG00000003517-8839.237ENSCPBG00000013389PARP129639.695Chrysemys_picta_bellii
ENSXCOG00000003517-7340.613ENSCANG00000034582PARP128540.613Colobus_angolensis_palliatus
ENSXCOG00000003517-8737.333ENSCGRG00001010916Parp129637.390Cricetulus_griseus_chok1gshd
ENSXCOG00000003517-7341.313ENSCGRG00000015998Parp128441.313Cricetulus_griseus_crigri
ENSXCOG00000003517-8836.711ENSCSEG00000009223parp12a9937.004Cynoglossus_semilaevis
ENSXCOG00000003517-8565.657ENSCSEG00000015804si:ch73-252i11.16965.829Cynoglossus_semilaevis
ENSXCOG00000003517-8836.790ENSCVAG00000016385parp12a9936.790Cyprinodon_variegatus
ENSXCOG00000003517-8837.819ENSCVAG00000016405parp12a9937.819Cyprinodon_variegatus
ENSXCOG00000003517-5865.816ENSDARG00000100660si:ch73-252i11.17565.816Danio_rerio
ENSXCOG00000003517-8838.485ENSDARG00000042496parp12a9938.485Danio_rerio
ENSXCOG00000003517-5246.849ENSDNOG00000009685-9446.849Dasypus_novemcinctus
ENSXCOG00000003517-8138.103ENSDORG00000009525Parp129738.103Dipodomys_ordii
ENSXCOG00000003517-5230.133ENSETEG00000013423-9730.133Echinops_telfairi
ENSXCOG00000003517-8933.537ENSEBUG00000000742-9433.537Eptatretus_burgeri
ENSXCOG00000003517-7331.746ENSEBUG00000016305-8831.746Eptatretus_burgeri
ENSXCOG00000003517-8836.417ENSECAG00000022601PARP128036.310Equus_caballus
ENSXCOG00000003517-6249.643ENSEEUG00000002654PARP127449.643Erinaceus_europaeus
ENSXCOG00000003517-8839.371ENSELUG00000019421parp12a9939.371Esox_lucius
ENSXCOG00000003517-9241.168ENSELUG00000002966-8141.317Esox_lucius
ENSXCOG00000003517-8950.597ENSELUG00000004066si:ch73-252i11.19549.721Esox_lucius
ENSXCOG00000003517-8936.350ENSFCAG00000026388PARP127336.350Felis_catus
ENSXCOG00000003517-8039.698ENSFALG00000009061PARP129739.933Ficedula_albicollis
ENSXCOG00000003517-8137.641ENSFDAG00000021493PARP129737.641Fukomys_damarensis
ENSXCOG00000003517-6380.569ENSFHEG00000016439si:ch73-252i11.15380.569Fundulus_heteroclitus
ENSXCOG00000003517-8836.969ENSFHEG00000011844parp12a9937.252Fundulus_heteroclitus
ENSXCOG00000003517-8836.158ENSFHEG00000011833parp12a9936.441Fundulus_heteroclitus
ENSXCOG00000003517-5864.103ENSGMOG00000005467-6964.103Gadus_morhua
ENSXCOG00000003517-6453.125ENSGMOG00000001046-9955.729Gadus_morhua
ENSXCOG00000003517-5847.870ENSGMOG00000016384-9947.870Gadus_morhua
ENSXCOG00000003517-6250.351ENSGMOG00000004950-9951.706Gadus_morhua
ENSXCOG00000003517-8735.075ENSGMOG00000009778-9935.522Gadus_morhua
ENSXCOG00000003517-7249.691ENSGMOG00000010741-9049.691Gadus_morhua
ENSXCOG00000003517-7142.570ENSGALG00000046187PARP129744.639Gallus_gallus
ENSXCOG00000003517-8836.107ENSGAFG00000021877parp12a9936.389Gambusia_affinis
ENSXCOG00000003517-8839.163ENSGAFG00000021878parp12a9939.163Gambusia_affinis
ENSXCOG00000003517-8836.024ENSGACG00000013321parp12a9936.024Gasterosteus_aculeatus
ENSXCOG00000003517-9453.343ENSGACG00000019123si:ch73-252i11.19153.912Gasterosteus_aculeatus
ENSXCOG00000003517-8837.825ENSGAGG00000001030PARP129738.285Gopherus_agassizii
ENSXCOG00000003517-8836.310ENSGGOG00000000828PARP129636.310Gorilla_gorilla
ENSXCOG00000003517-8836.947ENSHBUG00000017751parp12a9937.518Haplochromis_burtoni
ENSXCOG00000003517-8973.434ENSHBUG00000011345si:ch73-252i11.18673.434Haplochromis_burtoni
ENSXCOG00000003517-8836.912ENSHGLG00000018555PARP129636.652Heterocephalus_glaber_female
ENSXCOG00000003517-8138.871ENSHGLG00100013923PARP129638.871Heterocephalus_glaber_male
ENSXCOG00000003517-8836.041ENSHCOG00000007607parp12a9436.041Hippocampus_comes
ENSXCOG00000003517-9447.881ENSIPUG00000005487si:ch73-252i11.19647.753Ictalurus_punctatus
ENSXCOG00000003517-8836.043ENSIPUG00000014600parp12a9936.043Ictalurus_punctatus
ENSXCOG00000003517-8140.306ENSIPUG00000005344-8738.368Ictalurus_punctatus
ENSXCOG00000003517-8838.508ENSIPUG00000014496-9838.508Ictalurus_punctatus
ENSXCOG00000003517-8837.117ENSIPUG00000014525parp12a9937.117Ictalurus_punctatus
ENSXCOG00000003517-8839.324ENSIPUG00000005447PARP125739.385Ictalurus_punctatus
ENSXCOG00000003517-7341.313ENSSTOG00000004578PARP128441.313Ictidomys_tridecemlineatus
ENSXCOG00000003517-8137.157ENSJJAG00000019161Parp129737.318Jaculus_jaculus
ENSXCOG00000003517-9072.048ENSKMAG00000003066-6572.048Kryptolebias_marmoratus
ENSXCOG00000003517-8836.819ENSKMAG00000022046parp12a9937.393Kryptolebias_marmoratus
ENSXCOG00000003517-8771.287ENSLBEG00000027680si:ch73-252i11.17867.640Labrus_bergylta
ENSXCOG00000003517-5447.425ENSLBEG00000009125parp12a8447.425Labrus_bergylta
ENSXCOG00000003517-8838.030ENSLBEG00000009082parp12a9938.427Labrus_bergylta
ENSXCOG00000003517-8840.497ENSLACG00000018265PARP129739.972Latimeria_chalumnae
ENSXCOG00000003517-8738.253ENSLOCG00000016964parp12a9838.253Lepisosteus_oculatus
ENSXCOG00000003517-9535.420ENSLOCG00000016455-9836.874Lepisosteus_oculatus
ENSXCOG00000003517-9544.017ENSLOCG00000016450si:ch73-252i11.19544.017Lepisosteus_oculatus
ENSXCOG00000003517-7340.856ENSLAFG00000005717PARP128940.856Loxodonta_africana
ENSXCOG00000003517-8836.603ENSMFAG00000034646PARP129636.603Macaca_fascicularis
ENSXCOG00000003517-8836.324ENSMMUG00000004224PARP129636.324Macaca_mulatta
ENSXCOG00000003517-8836.603ENSMNEG00000028999PARP129636.603Macaca_nemestrina
ENSXCOG00000003517-7937.521ENSMLEG00000036058PARP129637.521Mandrillus_leucophaeus
ENSXCOG00000003517-8140.446ENSMAMG00000001755parp12a9040.764Mastacembelus_armatus
ENSXCOG00000003517-9265.944ENSMAMG00000001483si:ch73-252i11.16370.071Mastacembelus_armatus
ENSXCOG00000003517-8572.431ENSMZEG00005018251-7571.053Maylandia_zebra
ENSXCOG00000003517-8837.090ENSMZEG00005017042parp12a9937.375Maylandia_zebra
ENSXCOG00000003517-8952.312ENSMZEG00005018239-9652.312Maylandia_zebra
ENSXCOG00000003517-7241.815ENSMGAG00000013110PARP128942.436Meleagris_gallopavo
ENSXCOG00000003517-8835.036ENSMICG00000003163PARP129635.036Microcebus_murinus
ENSXCOG00000003517-8837.997ENSMOCG00000002228Parp129637.997Microtus_ochrogaster
ENSXCOG00000003517-8838.520ENSMMOG00000019226parp12a9938.822Mola_mola
ENSXCOG00000003517-8139.542ENSMODG00000013713PARP127939.542Monodelphis_domestica
ENSXCOG00000003517-8837.016ENSMALG00000022003parp12a9937.410Monopterus_albus
ENSXCOG00000003517-9056.375ENSMALG00000003217-9054.323Monopterus_albus
ENSXCOG00000003517-8836.642MGP_CAROLIEiJ_G0028242Parp129636.957Mus_caroli
ENSXCOG00000003517-8138.486ENSMUSG00000038507Parp129636.773Mus_musculus
ENSXCOG00000003517-8836.804MGP_PahariEiJ_G0022000Parp129637.390Mus_pahari
ENSXCOG00000003517-8138.808MGP_SPRETEiJ_G0029241Parp129637.355Mus_spretus
ENSXCOG00000003517-7241.748ENSMPUG00000003682PARP128741.748Mustela_putorius_furo
ENSXCOG00000003517-7441.006ENSMLUG00000004185PARP128741.006Myotis_lucifugus
ENSXCOG00000003517-8836.082ENSNGAG00000015925Parp129636.082Nannospalax_galili
ENSXCOG00000003517-9651.888ENSNBRG00000020115si:ch73-252i11.19651.888Neolamprologus_brichardi
ENSXCOG00000003517-7340.769ENSNLEG00000001802-7040.769Nomascus_leucogenys
ENSXCOG00000003517-6161.628ENSOPRG00000009956PARP126861.628Ochotona_princeps
ENSXCOG00000003517-8137.480ENSODEG00000013738PARP129737.925Octodon_degus
ENSXCOG00000003517-8839.426ENSONIG00000010409parp12a9939.577Oreochromis_niloticus
ENSXCOG00000003517-8953.228ENSONIG00000009963si:ch73-252i11.19953.204Oreochromis_niloticus
ENSXCOG00000003517-7340.039ENSOCUG00000003213PARP128540.039Oryctolagus_cuniculus
ENSXCOG00000003517-8569.403ENSORLG00000009167si:ch73-252i11.16366.898Oryzias_latipes
ENSXCOG00000003517-8836.429ENSORLG00000016148parp12a9936.872Oryzias_latipes
ENSXCOG00000003517-8569.154ENSORLG00020005374si:ch73-252i11.16966.667Oryzias_latipes_hni
ENSXCOG00000003517-8836.286ENSORLG00020010032parp12a9936.729Oryzias_latipes_hni
ENSXCOG00000003517-5942.155ENSORLG00015001179parp12a9831.180Oryzias_latipes_hsok
ENSXCOG00000003517-5968.262ENSORLG00015002400si:ch73-252i11.18065.808Oryzias_latipes_hsok
ENSXCOG00000003517-9265.256ENSOMEG00000023360-7662.869Oryzias_melastigma
ENSXCOG00000003517-8138.585ENSOMEG00000022731parp12a8939.228Oryzias_melastigma
ENSXCOG00000003517-8835.777ENSOGAG00000008906PARP129636.217Otolemur_garnettii
ENSXCOG00000003517-8836.873ENSOARG00000012408PARP129637.168Ovis_aries
ENSXCOG00000003517-7340.769ENSPPAG00000029869PARP128040.769Pan_paniscus
ENSXCOG00000003517-8936.204ENSPPRG00000024763PARP129736.204Panthera_pardus
ENSXCOG00000003517-7440.190ENSPTIG00000018638PARP128440.190Panthera_tigris_altaica
ENSXCOG00000003517-8836.564ENSPTRG00000019761PARP129636.564Pan_troglodytes
ENSXCOG00000003517-8836.603ENSPANG00000022225PARP129636.603Papio_anubis
ENSXCOG00000003517-9446.176ENSPKIG00000018215-7346.098Paramormyrops_kingsleyae
ENSXCOG00000003517-7244.355ENSPSIG00000015130PARP129544.758Pelodiscus_sinensis
ENSXCOG00000003517-8837.557ENSPMGG00000006266-9937.234Periophthalmus_magnuspinnatus
ENSXCOG00000003517-8850.962ENSPMGG00000020753si:ch73-252i11.19747.574Periophthalmus_magnuspinnatus
ENSXCOG00000003517-8837.775ENSPEMG00000023375Parp129637.775Peromyscus_maniculatus_bairdii
ENSXCOG00000003517-5532.506ENSPMAG00000001445-9932.506Petromyzon_marinus
ENSXCOG00000003517-8040.472ENSPCIG00000021651-8940.472Phascolarctos_cinereus
ENSXCOG00000003517-8838.647ENSPCIG00000016386PARP129938.797Phascolarctos_cinereus
ENSXCOG00000003517-7579.065ENSPFOG00000009053-9579.065Poecilia_formosa
ENSXCOG00000003517-8883.410ENSPFOG00000009078-7683.410Poecilia_formosa
ENSXCOG00000003517-8836.648ENSPLAG00000006271-9936.648Poecilia_latipinna
ENSXCOG00000003517-8836.299ENSPLAG00000006241parp12a9936.582Poecilia_latipinna
ENSXCOG00000003517-9081.481ENSPLAG00000000024-7581.481Poecilia_latipinna
ENSXCOG00000003517-9378.426ENSPMEG00000016654si:ch73-252i11.19178.863Poecilia_mexicana
ENSXCOG00000003517-8836.790ENSPMEG00000014115parp12a9936.648Poecilia_mexicana
ENSXCOG00000003517-8836.775ENSPMEG00000014083parp12a9937.199Poecilia_mexicana
ENSXCOG00000003517-8836.879ENSPREG00000000674parp12a9936.879Poecilia_reticulata
ENSXCOG00000003517-8836.248ENSPREG00000000666parp12a9936.812Poecilia_reticulata
ENSXCOG00000003517-6339.286ENSPVAG00000003159PARP128939.286Pteropus_vampyrus
ENSXCOG00000003517-8572.932ENSPNYG00000012196si:ch73-252i11.18165.904Pundamilia_nyererei
ENSXCOG00000003517-8837.090ENSPNYG00000021033parp12a9937.375Pundamilia_nyererei
ENSXCOG00000003517-8838.393ENSPNAG00000021230parp12a9038.393Pygocentrus_nattereri
ENSXCOG00000003517-8850.460ENSPNAG00000007770si:ch73-252i11.18150.460Pygocentrus_nattereri
ENSXCOG00000003517-9437.846ENSPNAG00000007780-6737.846Pygocentrus_nattereri
ENSXCOG00000003517-8838.235ENSPNAG00000021181parp12a9938.235Pygocentrus_nattereri
ENSXCOG00000003517-9138.088ENSPNAG00000007794PARP129638.088Pygocentrus_nattereri
ENSXCOG00000003517-8838.018ENSRNOG00000008196Parp129638.032Rattus_norvegicus
ENSXCOG00000003517-8836.607ENSRBIG00000039432PARP129636.607Rhinopithecus_bieti
ENSXCOG00000003517-8836.564ENSRROG00000036363PARP129636.564Rhinopithecus_roxellana
ENSXCOG00000003517-7340.734ENSSBOG00000035883PARP128540.734Saimiri_boliviensis_boliviensis
ENSXCOG00000003517-5748.485ENSSHAG00000014045-7148.485Sarcophilus_harrisii
ENSXCOG00000003517-7241.520ENSSHAG00000005831-8641.520Sarcophilus_harrisii
ENSXCOG00000003517-7243.400ENSSFOG00015003427parp12a8544.106Scleropages_formosus
ENSXCOG00000003517-9145.455ENSSFOG00015010708-9245.455Scleropages_formosus
ENSXCOG00000003517-8847.261ENSSFOG00015010647-9546.466Scleropages_formosus
ENSXCOG00000003517-9268.095ENSSMAG00000014233si:ch73-252i11.17269.139Scophthalmus_maximus
ENSXCOG00000003517-8835.868ENSSMAG00000010702parp12a9936.390Scophthalmus_maximus
ENSXCOG00000003517-8837.147ENSSDUG00000000297parp12a9937.571Seriola_dumerili
ENSXCOG00000003517-9656.923ENSSDUG00000014148si:ch73-252i11.19457.703Seriola_dumerili
ENSXCOG00000003517-9259.850ENSSLDG00000013415si:ch73-252i11.19360.420Seriola_lalandi_dorsalis
ENSXCOG00000003517-8837.021ENSSLDG00000009897parp12a9937.447Seriola_lalandi_dorsalis
ENSXCOG00000003517-6034.272ENSSARG00000012642-7834.272Sorex_araneus
ENSXCOG00000003517-8837.633ENSSPUG00000007335PARP129343.487Sphenodon_punctatus
ENSXCOG00000003517-9267.972ENSSPAG00000020627si:ch73-252i11.17868.916Stegastes_partitus
ENSXCOG00000003517-8837.429ENSSPAG00000020097parp12a9937.446Stegastes_partitus
ENSXCOG00000003517-8936.804ENSSSCG00000016502PARP129736.804Sus_scrofa
ENSXCOG00000003517-8736.818ENSTGUG00000011354PARP1210037.121Taeniopygia_guttata
ENSXCOG00000003517-8836.589ENSTRUG00000007328parp12a9936.589Takifugu_rubripes
ENSXCOG00000003517-7849.828ENSTNIG00000006913si:ch73-252i11.110050.256Tetraodon_nigroviridis
ENSXCOG00000003517-8138.339ENSTNIG00000008377parp12a9938.818Tetraodon_nigroviridis
ENSXCOG00000003517-5249.500ENSTBEG00000000837-6149.500Tupaia_belangeri
ENSXCOG00000003517-8134.790ENSTTRG00000015180PARP129633.776Tursiops_truncatus
ENSXCOG00000003517-8237.721ENSUAMG00000013122PARP129437.721Ursus_americanus
ENSXCOG00000003517-7340.927ENSUMAG00000015082PARP128340.927Ursus_maritimus
ENSXCOG00000003517-7340.848ENSVVUG00000001841PARP128640.848Vulpes_vulpes
ENSXCOG00000003517-8838.231ENSXETG00000008923-9938.231Xenopus_tropicalis
ENSXCOG00000003517-9092.791ENSXMAG00000024405-7492.791Xiphophorus_maculatus
ENSXCOG00000003517-8838.244ENSXMAG00000021188parp12a9938.484Xiphophorus_maculatus
ENSXCOG00000003517-8837.571ENSXMAG00000002950-9937.571Xiphophorus_maculatus

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