EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000003615 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 5665 bases
Position: chrKQ557205.1:26185719-26191383
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000004577	PARP	PF00644.20	9.7e-29	1	1
ENSXCOP00000004578	PARP	PF00644.20	5.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000004633	-	2049	-	ENSXCOP00000004577	682 (aa)	-	-
ENSXCOT00000004634	-	948	-	ENSXCOP00000004578	315 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000003615's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000003615's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000003615	-	58	30.693	ENSXCOG00000013445	PARP11	64	30.693
ENSXCOG00000003615	-	60	37.234	ENSXCOG00000012535	-	67	38.021

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000003615	-	78	32.877	ENSG00000178685	PARP10	55	33.000	Homo_sapiens
ENSXCOG00000003615	-	97	71.475	ENSACIG00000006093	-	100	71.475	Amphilophus_citrinellus
ENSXCOG00000003615	-	87	65.833	ENSAOCG00000007023	-	79	65.833	Amphiprion_ocellaris
ENSXCOG00000003615	-	100	67.638	ENSAPEG00000005731	si:ch1073-296d18.1	79	88.500	Amphiprion_percula
ENSXCOG00000003615	-	86	77.982	ENSATEG00000011078	si:ch1073-296d18.1	54	77.982	Anabas_testudineus
ENSXCOG00000003615	-	62	50.532	ENSANAG00000037218	PARP10	57	32.715	Aotus_nancymaae
ENSXCOG00000003615	-	87	64.735	ENSACLG00000012196	-	88	64.735	Astatotilapia_calliptera
ENSXCOG00000003615	-	87	72.727	ENSAMXG00000039891	si:ch1073-296d18.1	54	72.727	Astyanax_mexicanus
ENSXCOG00000003615	-	82	50.000	ENSTSYG00000005439	PARP10	62	50.000	Carlito_syrichta
ENSXCOG00000003615	-	78	34.083	ENSCPOG00000014235	PARP10	58	34.083	Cavia_porcellus
ENSXCOG00000003615	-	78	33.106	ENSCCAG00000024610	PARP10	56	33.220	Cebus_capucinus
ENSXCOG00000003615	-	78	32.767	ENSCATG00000025822	PARP10	55	33.107	Cercocebus_atys
ENSXCOG00000003615	-	78	32.699	ENSCLAG00000013744	PARP10	58	32.538	Chinchilla_lanigera
ENSXCOG00000003615	-	78	32.428	ENSCSAG00000008843	PARP10	55	32.767	Chlorocebus_sabaeus
ENSXCOG00000003615	-	96	42.985	ENSCPBG00000004075	PARP10	58	60.894	Chrysemys_picta_bellii
ENSXCOG00000003615	-	78	32.881	ENSCANG00000043564	PARP10	55	33.220	Colobus_angolensis_palliatus
ENSXCOG00000003615	-	78	33.562	ENSCGRG00001012953	Parp10	58	33.333	Cricetulus_griseus_chok1gshd
ENSXCOG00000003615	-	78	33.562	ENSCGRG00000003088	Parp10	58	33.333	Cricetulus_griseus_crigri
ENSXCOG00000003615	-	83	57.651	ENSCSEG00000013448	-	98	57.651	Cynoglossus_semilaevis
ENSXCOG00000003615	-	87	69.268	ENSCVAG00000014098	-	89	69.268	Cyprinodon_variegatus
ENSXCOG00000003615	-	99	52.339	ENSDARG00000087145	si:ch1073-296d18.1	85	59.514	Danio_rerio
ENSXCOG00000003615	-	64	48.387	ENSDNOG00000046110	PARP10	54	32.872	Dasypus_novemcinctus
ENSXCOG00000003615	-	62	51.337	ENSEASG00005009729	PARP10	56	32.770	Equus_asinus_asinus
ENSXCOG00000003615	-	61	47.027	ENSEEUG00000005507	PARP10	60	30.729	Erinaceus_europaeus
ENSXCOG00000003615	-	87	75.124	ENSELUG00000001455	si:ch1073-296d18.1	70	77.059	Esox_lucius
ENSXCOG00000003615	-	87	65.719	ENSFHEG00000016698	-	87	65.719	Fundulus_heteroclitus
ENSXCOG00000003615	-	100	47.302	ENSGMOG00000000853	si:ch1073-296d18.1	72	51.444	Gadus_morhua
ENSXCOG00000003615	-	100	81.871	ENSGAFG00000018899	-	72	100.000	Gambusia_affinis
ENSXCOG00000003615	-	100	55.521	ENSGACG00000008798	si:ch1073-296d18.1	69	58.887	Gasterosteus_aculeatus
ENSXCOG00000003615	-	78	32.650	ENSGGOG00000001802	PARP10	55	32.598	Gorilla_gorilla
ENSXCOG00000003615	-	100	67.055	ENSHBUG00000018913	-	74	87.500	Haplochromis_burtoni
ENSXCOG00000003615	-	66	53.514	ENSHGLG00000010423	PARP10	53	32.186	Heterocephalus_glaber_female
ENSXCOG00000003615	-	87	61.538	ENSIPUG00000011187	parp10	50	61.538	Ictalurus_punctatus
ENSXCOG00000003615	-	83	51.351	ENSJJAG00000017801	Parp10	61	51.351	Jaculus_jaculus
ENSXCOG00000003615	-	98	90.000	ENSKMAG00000002066	si:ch1073-296d18.1	57	90.000	Kryptolebias_marmoratus
ENSXCOG00000003615	-	100	66.564	ENSLBEG00000010052	-	87	66.564	Labrus_bergylta
ENSXCOG00000003615	-	86	87.000	ENSLBEG00000003798	si:ch1073-296d18.1	82	87.000	Labrus_bergylta
ENSXCOG00000003615	-	98	31.849	ENSLACG00000008645	PARP10	76	32.167	Latimeria_chalumnae
ENSXCOG00000003615	-	87	72.308	ENSLOCG00000008505	si:ch1073-296d18.1	55	72.308	Lepisosteus_oculatus
ENSXCOG00000003615	-	78	32.534	ENSMFAG00000044942	PARP10	55	32.933	Macaca_fascicularis
ENSXCOG00000003615	-	78	32.598	ENSMMUG00000000449	PARP10	54	33.107	Macaca_mulatta
ENSXCOG00000003615	-	78	32.598	ENSMNEG00000034827	PARP10	55	33.107	Macaca_nemestrina
ENSXCOG00000003615	-	69	31.203	ENSMLEG00000024662	PARP10	53	31.579	Mandrillus_leucophaeus
ENSXCOG00000003615	-	98	88.500	ENSMAMG00000003770	si:ch1073-296d18.1	70	88.500	Mastacembelus_armatus
ENSXCOG00000003615	-	100	67.055	ENSMZEG00005001245	-	74	87.000	Maylandia_zebra
ENSXCOG00000003615	-	64	37.598	ENSMICG00000016227	PARP10	56	33.162	Microcebus_murinus
ENSXCOG00000003615	-	78	32.302	ENSMOCG00000000179	Parp10	58	33.219	Microtus_ochrogaster
ENSXCOG00000003615	-	65	80.000	ENSMMOG00000021242	-	77	80.000	Mola_mola
ENSXCOG00000003615	-	67	49.189	ENSMODG00000010393	-	61	49.189	Monodelphis_domestica
ENSXCOG00000003615	-	97	68.525	ENSMALG00000020513	-	100	68.525	Monopterus_albus
ENSXCOG00000003615	-	78	30.201	MGP_CAROLIEiJ_G0019914	Parp10	95	57.143	Mus_caroli
ENSXCOG00000003615	-	81	54.054	ENSMUSG00000063268	Parp10	95	57.143	Mus_musculus
ENSXCOG00000003615	-	78	31.889	MGP_PahariEiJ_G0019924	Parp10	96	53.774	Mus_pahari
ENSXCOG00000003615	-	81	54.054	MGP_SPRETEiJ_G0020817	Parp10	95	57.143	Mus_spretus
ENSXCOG00000003615	-	98	86.500	ENSNBRG00000000940	si:ch1073-296d18.1	62	86.500	Neolamprologus_brichardi
ENSXCOG00000003615	-	78	32.378	ENSNLEG00000002423	PARP10	54	32.939	Nomascus_leucogenys
ENSXCOG00000003615	-	74	31.341	ENSOPRG00000015616	-	52	31.703	Ochotona_princeps
ENSXCOG00000003615	-	75	52.432	ENSODEG00000014276	PARP10	51	52.151	Octodon_degus
ENSXCOG00000003615	-	100	56.782	ENSONIG00000007669	si:ch1073-296d18.1	77	56.447	Oreochromis_niloticus
ENSXCOG00000003615	-	62	50.811	ENSOANG00000013123	-	74	30.567	Ornithorhynchus_anatinus
ENSXCOG00000003615	-	57	56.938	ENSORLG00000013501	-	99	56.938	Oryzias_latipes
ENSXCOG00000003615	-	96	90.000	ENSORLG00015010006	si:ch1073-296d18.1	62	90.000	Oryzias_latipes_hsok
ENSXCOG00000003615	-	85	87.255	ENSOMEG00000011731	si:ch1073-296d18.1	54	87.255	Oryzias_melastigma
ENSXCOG00000003615	-	78	31.720	ENSOGAG00000033747	PARP10	56	32.220	Otolemur_garnettii
ENSXCOG00000003615	-	62	47.872	ENSOARG00000015581	PARP10	59	47.872	Ovis_aries
ENSXCOG00000003615	-	61	51.596	ENSPPAG00000041157	PARP10	55	32.446	Pan_paniscus
ENSXCOG00000003615	-	61	51.596	ENSPTRG00000043606	PARP10	55	32.446	Pan_troglodytes
ENSXCOG00000003615	-	78	33.107	ENSPANG00000023348	PARP10	56	32.943	Papio_anubis
ENSXCOG00000003615	-	91	55.000	ENSPKIG00000002515	-	99	55.000	Paramormyrops_kingsleyae
ENSXCOG00000003615	-	81	60.507	ENSPMGG00000002294	-	95	60.507	Periophthalmus_magnuspinnatus
ENSXCOG00000003615	-	99	98.500	ENSPFOG00000013067	si:ch1073-296d18.1	58	98.500	Poecilia_formosa
ENSXCOG00000003615	-	100	91.496	ENSPLAG00000022710	-	100	91.496	Poecilia_latipinna
ENSXCOG00000003615	-	100	89.003	ENSPMEG00000019504	-	100	89.003	Poecilia_mexicana
ENSXCOG00000003615	-	98	82.201	ENSPREG00000016264	-	92	82.201	Poecilia_reticulata
ENSXCOG00000003615	-	62	52.128	ENSPPYG00000018955	PARP10	57	31.973	Pongo_abelii
ENSXCOG00000003615	-	63	49.468	ENSPCAG00000001115	PARP10	67	31.197	Procavia_capensis
ENSXCOG00000003615	-	79	32.939	ENSPCOG00000028616	PARP10	58	33.727	Propithecus_coquereli
ENSXCOG00000003615	-	62	49.730	ENSPVAG00000006369	PARP10	65	49.730	Pteropus_vampyrus
ENSXCOG00000003615	-	87	62.252	ENSPNYG00000005086	-	87	62.252	Pundamilia_nyererei
ENSXCOG00000003615	-	78	32.409	ENSRNOG00000004361	Parp10	57	33.969	Rattus_norvegicus
ENSXCOG00000003615	-	78	33.277	ENSRBIG00000040506	PARP10	55	33.616	Rhinopithecus_bieti
ENSXCOG00000003615	-	78	33.107	ENSRROG00000039086	PARP10	54	33.447	Rhinopithecus_roxellana
ENSXCOG00000003615	-	78	31.919	ENSSBOG00000008301	PARP10	58	33.844	Saimiri_boliviensis_boliviensis
ENSXCOG00000003615	-	85	59.176	ENSSFOG00015005222	-	85	59.176	Scleropages_formosus
ENSXCOG00000003615	-	99	64.223	ENSSMAG00000020545	-	77	84.343	Scophthalmus_maximus
ENSXCOG00000003615	-	87	69.000	ENSSLDG00000003545	-	89	69.500	Seriola_lalandi_dorsalis
ENSXCOG00000003615	-	87	64.618	ENSSPAG00000005439	-	85	64.618	Stegastes_partitus
ENSXCOG00000003615	-	98	41.888	ENSTNIG00000014023	si:ch1073-296d18.1	77	41.888	Tetraodon_nigroviridis
ENSXCOG00000003615	-	64	48.663	ENSTTRG00000006314	PARP10	59	30.756	Tursiops_truncatus
ENSXCOG00000003615	-	100	94.428	ENSXMAG00000025112	-	100	94.428	Xiphophorus_maculatus