EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000003622 (Gene tree)
Gene ID: -
Gene Symbol: mrm1
Alias: si:dkey-189h5.1
Full Name: mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 3347 bases
Position: chrKQ557202.1:9413475-9416821
Accession: ZDB-GENE-060526-229
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000004586	SpoU_sub_bind	PF08032.12	3.8e-15	1	1
ENSXCOP00000004586	SpoU_methylase	PF00588.19	2.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000004642	-	1068	-	ENSXCOP00000004586	355 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000003622's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000003622's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000003622	mrm1	71	49.416	ENSG00000278619	MRM1	70	53.153	Homo_sapiens
ENSXCOG00000003622	mrm1	97	63.202	ENSAPOG00000016309	mrm1	87	63.202	Acanthochromis_polyacanthus
ENSXCOG00000003622	mrm1	78	47.350	ENSAMEG00000008301	MRM1	77	47.350	Ailuropoda_melanoleuca
ENSXCOG00000003622	mrm1	97	64.571	ENSACIG00000012244	mrm1	89	64.571	Amphilophus_citrinellus
ENSXCOG00000003622	mrm1	96	65.029	ENSAOCG00000000362	mrm1	84	65.029	Amphiprion_ocellaris
ENSXCOG00000003622	mrm1	96	64.740	ENSAPEG00000004511	mrm1	84	64.740	Amphiprion_percula
ENSXCOG00000003622	mrm1	71	50.000	ENSAPLG00000006433	MRM1	83	50.775	Anas_platyrhynchos
ENSXCOG00000003622	mrm1	74	47.970	ENSACAG00000002573	MRM1	84	47.970	Anolis_carolinensis
ENSXCOG00000003622	mrm1	78	45.775	ENSANAG00000025500	MRM1	78	45.775	Aotus_nancymaae
ENSXCOG00000003622	mrm1	78	70.671	ENSACLG00000023745	mrm1	98	70.690	Astatotilapia_calliptera
ENSXCOG00000003622	mrm1	86	52.978	ENSAMXG00000007295	mrm1	78	52.978	Astyanax_mexicanus
ENSXCOG00000003622	mrm1	86	52.978	ENSAMXG00000030596	mrm1	78	52.978	Astyanax_mexicanus
ENSXCOG00000003622	mrm1	78	46.479	ENSBTAG00000010311	MRM1	77	46.479	Bos_taurus
ENSXCOG00000003622	mrm1	78	45.423	ENSCJAG00000001023	MRM1	78	45.423	Callithrix_jacchus
ENSXCOG00000003622	mrm1	78	48.399	ENSCAFG00000017849	MRM1	79	48.399	Canis_familiaris
ENSXCOG00000003622	mrm1	78	47.331	ENSCAFG00020002377	MRM1	79	47.331	Canis_lupus_dingo
ENSXCOG00000003622	mrm1	78	46.290	ENSCHIG00000008558	MRM1	77	46.290	Capra_hircus
ENSXCOG00000003622	mrm1	78	47.350	ENSTSYG00000036380	MRM1	77	47.350	Carlito_syrichta
ENSXCOG00000003622	mrm1	81	44.983	ENSCPOG00000004283	MRM1	80	44.828	Cavia_porcellus
ENSXCOG00000003622	mrm1	78	45.423	ENSCCAG00000020032	MRM1	78	45.423	Cebus_capucinus
ENSXCOG00000003622	mrm1	71	50.195	ENSCATG00000041516	MRM1	73	50.195	Cercocebus_atys
ENSXCOG00000003622	mrm1	81	46.465	ENSCLAG00000010960	MRM1	80	46.465	Chinchilla_lanigera
ENSXCOG00000003622	mrm1	71	49.805	ENSCSAG00000006055	MRM1	73	49.805	Chlorocebus_sabaeus
ENSXCOG00000003622	mrm1	75	47.445	ENSCPBG00000009581	MRM1	59	47.445	Chrysemys_picta_bellii
ENSXCOG00000003622	mrm1	71	49.805	ENSCANG00000025543	MRM1	73	49.805	Colobus_angolensis_palliatus
ENSXCOG00000003622	mrm1	78	47.535	ENSCGRG00001001937	Mrm1	86	47.535	Cricetulus_griseus_chok1gshd
ENSXCOG00000003622	mrm1	78	47.535	ENSCGRG00000009593	Mrm1	86	47.535	Cricetulus_griseus_crigri
ENSXCOG00000003622	mrm1	94	61.194	ENSCSEG00000014575	mrm1	86	61.194	Cynoglossus_semilaevis
ENSXCOG00000003622	mrm1	97	75.434	ENSCVAG00000012104	mrm1	91	75.434	Cyprinodon_variegatus
ENSXCOG00000003622	mrm1	55	58.883	ENSDARG00000059658	mrm1	99	58.883	Danio_rerio
ENSXCOG00000003622	mrm1	78	39.716	ENSDNOG00000035159	MRM1	76	39.716	Dasypus_novemcinctus
ENSXCOG00000003622	mrm1	59	50.691	ENSDORG00000013267	Mrm1	92	50.691	Dipodomys_ordii
ENSXCOG00000003622	mrm1	64	43.460	ENSETEG00000000378	MRM1	88	43.460	Echinops_telfairi
ENSXCOG00000003622	mrm1	81	45.890	ENSEASG00005002123	MRM1	81	45.890	Equus_asinus_asinus
ENSXCOG00000003622	mrm1	81	45.548	ENSECAG00000025139	MRM1	81	45.548	Equus_caballus
ENSXCOG00000003622	mrm1	53	41.969	ENSEEUG00000013434	-	83	42.188	Erinaceus_europaeus
ENSXCOG00000003622	mrm1	80	63.356	ENSELUG00000012392	mrm1	66	63.356	Esox_lucius
ENSXCOG00000003622	mrm1	78	45.230	ENSFCAG00000031667	MRM1	77	45.230	Felis_catus
ENSXCOG00000003622	mrm1	62	49.333	ENSFDAG00000018545	MRM1	75	49.333	Fukomys_damarensis
ENSXCOG00000003622	mrm1	97	74.352	ENSFHEG00000005529	mrm1	97	75.071	Fundulus_heteroclitus
ENSXCOG00000003622	mrm1	68	49.597	ENSGALG00000039523	MRM1	98	49.597	Gallus_gallus
ENSXCOG00000003622	mrm1	99	96.620	ENSGAFG00000012959	mrm1	97	96.620	Gambusia_affinis
ENSXCOG00000003622	mrm1	73	74.517	ENSGACG00000004024	mrm1	98	74.517	Gasterosteus_aculeatus
ENSXCOG00000003622	mrm1	79	47.018	ENSGAGG00000000908	MRM1	71	47.018	Gopherus_agassizii
ENSXCOG00000003622	mrm1	71	49.416	ENSGGOG00000007979	MRM1	73	49.416	Gorilla_gorilla
ENSXCOG00000003622	mrm1	78	70.318	ENSHBUG00000004484	mrm1	98	70.345	Haplochromis_burtoni
ENSXCOG00000003622	mrm1	78	45.230	ENSHGLG00000008701	MRM1	78	45.230	Heterocephalus_glaber_female
ENSXCOG00000003622	mrm1	59	49.767	ENSHGLG00100012646	MRM1	75	48.416	Heterocephalus_glaber_male
ENSXCOG00000003622	mrm1	88	59.875	ENSHCOG00000003665	mrm1	90	59.875	Hippocampus_comes
ENSXCOG00000003622	mrm1	88	50.298	ENSIPUG00000022357	mrm1	86	50.298	Ictalurus_punctatus
ENSXCOG00000003622	mrm1	81	45.578	ENSSTOG00000002422	MRM1	86	45.578	Ictidomys_tridecemlineatus
ENSXCOG00000003622	mrm1	77	45.714	ENSJJAG00000010068	Mrm1	91	45.714	Jaculus_jaculus
ENSXCOG00000003622	mrm1	79	70.383	ENSLBEG00000009581	mrm1	96	70.383	Labrus_bergylta
ENSXCOG00000003622	mrm1	78	47.387	ENSLACG00000017664	MRM1	98	47.387	Latimeria_chalumnae
ENSXCOG00000003622	mrm1	79	56.747	ENSLOCG00000004945	mrm1	92	56.747	Lepisosteus_oculatus
ENSXCOG00000003622	mrm1	78	46.290	ENSLAFG00000012584	MRM1	84	46.290	Loxodonta_africana
ENSXCOG00000003622	mrm1	71	50.195	ENSMFAG00000032112	MRM1	74	50.195	Macaca_fascicularis
ENSXCOG00000003622	mrm1	71	50.195	ENSMMUG00000000622	MRM1	75	50.195	Macaca_mulatta
ENSXCOG00000003622	mrm1	71	50.195	ENSMNEG00000044557	MRM1	74	50.195	Macaca_nemestrina
ENSXCOG00000003622	mrm1	71	50.195	ENSMLEG00000031933	MRM1	73	50.195	Mandrillus_leucophaeus
ENSXCOG00000003622	mrm1	79	67.247	ENSMAMG00000007018	mrm1	98	67.007	Mastacembelus_armatus
ENSXCOG00000003622	mrm1	78	70.318	ENSMZEG00005008320	mrm1	98	70.345	Maylandia_zebra
ENSXCOG00000003622	mrm1	78	48.057	ENSMAUG00000020976	Mrm1	86	48.057	Mesocricetus_auratus
ENSXCOG00000003622	mrm1	78	48.410	ENSMICG00000004216	MRM1	82	48.410	Microcebus_murinus
ENSXCOG00000003622	mrm1	81	71.477	ENSMMOG00000001468	mrm1	89	71.477	Mola_mola
ENSXCOG00000003622	mrm1	90	42.121	ENSMODG00000003307	MRM1	75	42.121	Monodelphis_domestica
ENSXCOG00000003622	mrm1	82	69.799	ENSMALG00000014364	mrm1	98	69.868	Monopterus_albus
ENSXCOG00000003622	mrm1	78	48.239	MGP_CAROLIEiJ_G0016896	Mrm1	85	48.239	Mus_caroli
ENSXCOG00000003622	mrm1	78	48.239	ENSMUSG00000018405	Mrm1	85	48.239	Mus_musculus
ENSXCOG00000003622	mrm1	78	47.887	MGP_PahariEiJ_G0018026	Mrm1	85	47.887	Mus_pahari
ENSXCOG00000003622	mrm1	78	48.239	MGP_SPRETEiJ_G0017741	Mrm1	85	48.239	Mus_spretus
ENSXCOG00000003622	mrm1	73	48.485	ENSMPUG00000015063	MRM1	77	47.350	Mustela_putorius_furo
ENSXCOG00000003622	mrm1	73	47.727	ENSMLUG00000013208	MRM1	75	47.727	Myotis_lucifugus
ENSXCOG00000003622	mrm1	78	46.643	ENSNGAG00000019175	Mrm1	83	46.643	Nannospalax_galili
ENSXCOG00000003622	mrm1	78	70.671	ENSNBRG00000023533	mrm1	98	70.690	Neolamprologus_brichardi
ENSXCOG00000003622	mrm1	71	49.416	ENSNLEG00000002300	MRM1	73	49.416	Nomascus_leucogenys
ENSXCOG00000003622	mrm1	78	45.230	ENSOPRG00000012866	MRM1	79	45.230	Ochotona_princeps
ENSXCOG00000003622	mrm1	77	71.480	ENSONIG00000021236	mrm1	98	71.479	Oreochromis_niloticus
ENSXCOG00000003622	mrm1	81	44.108	ENSOCUG00000012149	MRM1	80	44.444	Oryctolagus_cuniculus
ENSXCOG00000003622	mrm1	82	69.024	ENSORLG00000025876	mrm1	98	69.024	Oryzias_latipes
ENSXCOG00000003622	mrm1	82	68.013	ENSORLG00020021701	mrm1	97	68.013	Oryzias_latipes_hni
ENSXCOG00000003622	mrm1	82	69.024	ENSORLG00015020702	mrm1	97	69.024	Oryzias_latipes_hsok
ENSXCOG00000003622	mrm1	81	71.331	ENSOMEG00000003504	mrm1	96	71.331	Oryzias_melastigma
ENSXCOG00000003622	mrm1	78	48.763	ENSOGAG00000013785	MRM1	87	48.763	Otolemur_garnettii
ENSXCOG00000003622	mrm1	78	46.290	ENSOARG00000018616	MRM1	77	46.290	Ovis_aries
ENSXCOG00000003622	mrm1	71	49.416	ENSPPAG00000043135	MRM1	74	49.416	Pan_paniscus
ENSXCOG00000003622	mrm1	78	45.230	ENSPPRG00000023620	MRM1	77	45.230	Panthera_pardus
ENSXCOG00000003622	mrm1	70	47.451	ENSPTIG00000009829	MRM1	89	47.451	Panthera_tigris_altaica
ENSXCOG00000003622	mrm1	71	49.416	ENSPTRG00000009049	MRM1	73	49.416	Pan_troglodytes
ENSXCOG00000003622	mrm1	71	50.195	ENSPANG00000022126	MRM1	73	50.195	Papio_anubis
ENSXCOG00000003622	mrm1	93	52.679	ENSPKIG00000007654	mrm1	90	52.679	Paramormyrops_kingsleyae
ENSXCOG00000003622	mrm1	76	46.071	ENSPSIG00000017622	MRM1	99	46.071	Pelodiscus_sinensis
ENSXCOG00000003622	mrm1	78	59.516	ENSPMGG00000003905	mrm1	86	59.516	Periophthalmus_magnuspinnatus
ENSXCOG00000003622	mrm1	57	42.922	ENSPMAG00000000484	mrm1	100	42.922	Petromyzon_marinus
ENSXCOG00000003622	mrm1	86	43.849	ENSPCIG00000003352	MRM1	79	44.164	Phascolarctos_cinereus
ENSXCOG00000003622	mrm1	99	86.686	ENSPFOG00000018234	mrm1	90	86.686	Poecilia_formosa
ENSXCOG00000003622	mrm1	99	93.484	ENSPLAG00000020759	mrm1	91	93.484	Poecilia_latipinna
ENSXCOG00000003622	mrm1	99	94.051	ENSPMEG00000021744	mrm1	91	94.051	Poecilia_mexicana
ENSXCOG00000003622	mrm1	99	93.768	ENSPREG00000013224	mrm1	97	93.768	Poecilia_reticulata
ENSXCOG00000003622	mrm1	78	39.576	ENSPCAG00000011756	MRM1	79	38.516	Procavia_capensis
ENSXCOG00000003622	mrm1	81	47.603	ENSPCOG00000020871	MRM1	85	47.603	Propithecus_coquereli
ENSXCOG00000003622	mrm1	73	40.076	ENSPVAG00000011626	MRM1	73	40.076	Pteropus_vampyrus
ENSXCOG00000003622	mrm1	78	69.965	ENSPNYG00000000528	mrm1	98	70.000	Pundamilia_nyererei
ENSXCOG00000003622	mrm1	84	55.272	ENSPNAG00000014551	mrm1	76	55.272	Pygocentrus_nattereri
ENSXCOG00000003622	mrm1	78	48.944	ENSRNOG00000027901	Mrm1	85	48.944	Rattus_norvegicus
ENSXCOG00000003622	mrm1	71	49.805	ENSRBIG00000040494	MRM1	73	49.805	Rhinopithecus_bieti
ENSXCOG00000003622	mrm1	71	49.805	ENSRROG00000041704	MRM1	73	49.805	Rhinopithecus_roxellana
ENSXCOG00000003622	mrm1	78	45.583	ENSSBOG00000024145	MRM1	78	45.583	Saimiri_boliviensis_boliviensis
ENSXCOG00000003622	mrm1	81	57.388	ENSSFOG00015022117	mrm1	75	57.388	Scleropages_formosus
ENSXCOG00000003622	mrm1	81	67.347	ENSSMAG00000009657	mrm1	97	67.347	Scophthalmus_maximus
ENSXCOG00000003622	mrm1	96	65.043	ENSSDUG00000009089	mrm1	87	65.043	Seriola_dumerili
ENSXCOG00000003622	mrm1	95	64.162	ENSSLDG00000024141	mrm1	97	64.162	Seriola_lalandi_dorsalis
ENSXCOG00000003622	mrm1	82	45.752	ENSSPUG00000000265	MRM1	78	45.752	Sphenodon_punctatus
ENSXCOG00000003622	mrm1	70	46.875	ENSSSCG00000017691	MRM1	74	46.182	Sus_scrofa
ENSXCOG00000003622	mrm1	52	56.545	ENSTGUG00000008048	MRM1	97	56.545	Taeniopygia_guttata
ENSXCOG00000003622	mrm1	97	60.845	ENSTRUG00000011737	mrm1	88	60.845	Takifugu_rubripes
ENSXCOG00000003622	mrm1	97	60.795	ENSTNIG00000010088	mrm1	90	60.795	Tetraodon_nigroviridis
ENSXCOG00000003622	mrm1	53	41.753	ENSTBEG00000007237	-	84	41.753	Tupaia_belangeri
ENSXCOG00000003622	mrm1	78	44.561	ENSTTRG00000011984	MRM1	77	44.561	Tursiops_truncatus
ENSXCOG00000003622	mrm1	75	55.556	ENSUAMG00000023152	MRM1	85	47.445	Ursus_americanus
ENSXCOG00000003622	mrm1	78	46.290	ENSVVUG00000018420	MRM1	67	46.290	Vulpes_vulpes
ENSXCOG00000003622	mrm1	99	99.433	ENSXMAG00000014890	mrm1	97	99.433	Xiphophorus_maculatus