EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000003730 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 1996 bases
Position: chrKQ557206.1:1236005-1238000
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000004738	RRM_1	PF00076.22	1.6e-33	1	2
ENSXCOP00000004738	RRM_1	PF00076.22	1.6e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000004795	-	486	-	ENSXCOP00000004738	161 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000003730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000003730's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000003730	-	67	31.193	ENSXCOG00000018826	srsf4	81	31.193
ENSXCOG00000003730	-	52	30.435	ENSXCOG00000008262	cirbpa	86	35.294
ENSXCOG00000003730	-	85	51.095	ENSXCOG00000006010	rbm4.3	93	51.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000003730	-	88	76.056	ENSAPOG00000012375	-	97	76.056	Acanthochromis_polyacanthus
ENSXCOG00000003730	-	89	79.021	ENSACIG00000016472	-	87	79.021	Amphilophus_citrinellus
ENSXCOG00000003730	-	88	76.056	ENSAOCG00000010907	-	97	76.056	Amphiprion_ocellaris
ENSXCOG00000003730	-	88	75.887	ENSAPEG00000009476	-	88	75.887	Amphiprion_percula
ENSXCOG00000003730	-	86	77.372	ENSATEG00000001912	-	90	77.372	Anabas_testudineus
ENSXCOG00000003730	-	98	52.866	ENSAMXG00000032121	rbm4.2	99	52.866	Astyanax_mexicanus
ENSXCOG00000003730	-	86	49.275	ENSCPBG00000023666	-	92	49.275	Chrysemys_picta_bellii
ENSXCOG00000003730	-	86	69.784	ENSCSEG00000007739	-	99	69.784	Cynoglossus_semilaevis
ENSXCOG00000003730	-	87	72.143	ENSDARG00000036386	rbm4.1	79	72.464	Danio_rerio
ENSXCOG00000003730	-	96	55.714	ENSEBUG00000007174	-	94	50.303	Eptatretus_burgeri
ENSXCOG00000003730	-	94	83.553	ENSFHEG00000003483	-	100	83.553	Fundulus_heteroclitus
ENSXCOG00000003730	-	94	96.711	ENSGAFG00000019301	-	100	96.711	Gambusia_affinis
ENSXCOG00000003730	-	86	49.275	ENSGAGG00000014558	-	92	49.275	Gopherus_agassizii
ENSXCOG00000003730	-	86	79.856	ENSHBUG00000011624	-	91	79.856	Haplochromis_burtoni
ENSXCOG00000003730	-	94	72.848	ENSHCOG00000011413	-	89	72.848	Hippocampus_comes
ENSXCOG00000003730	-	87	77.857	ENSLBEG00000019756	-	93	78.261	Labrus_bergylta
ENSXCOG00000003730	-	86	53.957	ENSLACG00000006343	zgc:77262	51	53.957	Latimeria_chalumnae
ENSXCOG00000003730	-	86	63.768	ENSLOCG00000002772	rbm4.1	94	63.768	Lepisosteus_oculatus
ENSXCOG00000003730	-	89	72.028	ENSMZEG00005009210	-	80	72.028	Maylandia_zebra
ENSXCOG00000003730	-	88	57.746	ENSMZEG00005028161	-	79	57.746	Maylandia_zebra
ENSXCOG00000003730	-	86	79.562	ENSMZEG00005028160	-	93	79.562	Maylandia_zebra
ENSXCOG00000003730	-	86	78.261	ENSMMOG00000020484	-	86	78.261	Mola_mola
ENSXCOG00000003730	-	86	79.137	ENSNBRG00000017763	-	90	79.137	Neolamprologus_brichardi
ENSXCOG00000003730	-	87	68.571	ENSPKIG00000020805	rbm4.1	85	68.841	Paramormyrops_kingsleyae
ENSXCOG00000003730	-	88	71.631	ENSPMGG00000004331	rbm4.1	94	71.631	Periophthalmus_magnuspinnatus
ENSXCOG00000003730	-	91	48.344	ENSPMAG00000003433	rbm4.2	71	48.344	Petromyzon_marinus
ENSXCOG00000003730	-	86	97.826	ENSPLAG00000018569	-	88	97.826	Poecilia_latipinna
ENSXCOG00000003730	-	86	97.826	ENSPMEG00000006278	-	88	97.826	Poecilia_mexicana
ENSXCOG00000003730	-	86	79.856	ENSPNYG00000004649	-	90	79.856	Pundamilia_nyererei
ENSXCOG00000003730	-	94	52.985	ENSSFOG00015018567	zgc:77262	89	52.985	Scleropages_formosus
ENSXCOG00000003730	-	91	76.712	ENSSMAG00000007575	-	94	76.712	Scophthalmus_maximus