EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000003911 (Gene tree)
Gene ID: -
Gene Symbol: gpatch4
Alias: im:7138553|si:dkey-202i12.4
Full Name: G patch domain containing 4
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 2677 bases
Position: chrKQ557218.1:1799679-1802355
Accession: ZDB-GENE-041008-158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000004987	G-patch	PF01585.23	3.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000005047	-	1134	-	ENSXCOP00000004987	377 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000003911's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000003911's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000003911	gpatch4	54	46.078	ENSG00000160818	GPATCH4	98	44.355	Homo_sapiens
ENSXCOG00000003911	gpatch4	72	64.828	ENSAPOG00000008436	gpatch4	97	54.872	Acanthochromis_polyacanthus
ENSXCOG00000003911	gpatch4	56	43.602	ENSAMEG00000014829	GPATCH4	50	42.035	Ailuropoda_melanoleuca
ENSXCOG00000003911	gpatch4	75	91.549	ENSAOCG00000015494	gpatch4	93	91.549	Amphiprion_ocellaris
ENSXCOG00000003911	gpatch4	72	65.870	ENSAPEG00000022243	gpatch4	97	56.812	Amphiprion_percula
ENSXCOG00000003911	gpatch4	56	78.241	ENSATEG00000006359	gpatch4	63	66.790	Anabas_testudineus
ENSXCOG00000003911	gpatch4	51	47.396	ENSANAG00000035354	GPATCH4	57	40.664	Aotus_nancymaae
ENSXCOG00000003911	gpatch4	66	71.713	ENSACLG00000010456	gpatch4	51	88.235	Astatotilapia_calliptera
ENSXCOG00000003911	gpatch4	53	44.444	ENSBTAG00000000406	GPATCH4	50	39.316	Bos_taurus
ENSXCOG00000003911	gpatch4	51	46.875	ENSCJAG00000006048	GPATCH4	91	44.068	Callithrix_jacchus
ENSXCOG00000003911	gpatch4	81	37.864	ENSCAFG00000016788	GPATCH4	56	41.434	Canis_familiaris
ENSXCOG00000003911	gpatch4	53	43.719	ENSCHIG00000021295	GPATCH4	55	38.800	Capra_hircus
ENSXCOG00000003911	gpatch4	56	45.498	ENSCCAG00000036114	GPATCH4	91	44.068	Cebus_capucinus
ENSXCOG00000003911	gpatch4	51	45.833	ENSCATG00000042152	GPATCH4	90	39.706	Cercocebus_atys
ENSXCOG00000003911	gpatch4	59	56.388	ENSCPBG00000025803	GPATCH4	74	57.205	Chrysemys_picta_bellii
ENSXCOG00000003911	gpatch4	51	46.354	ENSCANG00000030031	GPATCH4	78	44.068	Colobus_angolensis_palliatus
ENSXCOG00000003911	gpatch4	55	45.192	ENSCGRG00001016898	Gpatch4	54	39.592	Cricetulus_griseus_chok1gshd
ENSXCOG00000003911	gpatch4	55	45.192	ENSCGRG00000008399	Gpatch4	54	39.592	Cricetulus_griseus_crigri
ENSXCOG00000003911	gpatch4	56	66.667	ENSCSEG00000012030	gpatch4	61	66.667	Cynoglossus_semilaevis
ENSXCOG00000003911	gpatch4	55	74.762	ENSDARG00000091931	gpatch4	82	71.875	Danio_rerio
ENSXCOG00000003911	gpatch4	51	36.408	FBgn0039829	CG15561	65	34.855	Drosophila_melanogaster
ENSXCOG00000003911	gpatch4	66	41.600	ENSETEG00000000659	-	53	41.767	Echinops_telfairi
ENSXCOG00000003911	gpatch4	52	44.898	ENSEASG00005018284	GPATCH4	50	40.969	Equus_asinus_asinus
ENSXCOG00000003911	gpatch4	52	45.408	ENSECAG00000011135	GPATCH4	64	41.026	Equus_caballus
ENSXCOG00000003911	gpatch4	55	46.667	ENSEEUG00000003221	-	50	42.979	Erinaceus_europaeus
ENSXCOG00000003911	gpatch4	51	46.354	ENSFCAG00000006554	GPATCH4	59	41.739	Felis_catus
ENSXCOG00000003911	gpatch4	100	63.793	ENSFHEG00000003097	gpatch4	92	65.014	Fundulus_heteroclitus
ENSXCOG00000003911	gpatch4	50	57.219	ENSGALG00000048365	GPATCH4	65	51.055	Gallus_gallus
ENSXCOG00000003911	gpatch4	66	89.200	ENSGAFG00000021732	gpatch4	81	89.558	Gambusia_affinis
ENSXCOG00000003911	gpatch4	54	74.879	ENSGACG00000013318	gpatch4	62	74.879	Gasterosteus_aculeatus
ENSXCOG00000003911	gpatch4	56	58.962	ENSGAGG00000020710	GPATCH4	81	52.400	Gopherus_agassizii
ENSXCOG00000003911	gpatch4	54	46.040	ENSGGOG00000000753	GPATCH4	78	44.068	Gorilla_gorilla
ENSXCOG00000003911	gpatch4	66	72.510	ENSHBUG00000009675	gpatch4	51	88.235	Haplochromis_burtoni
ENSXCOG00000003911	gpatch4	55	67.925	ENSHCOG00000007016	gpatch4	60	67.925	Hippocampus_comes
ENSXCOG00000003911	gpatch4	57	69.266	ENSIPUG00000006348	gpatch4	70	63.256	Ictalurus_punctatus
ENSXCOG00000003911	gpatch4	55	44.498	ENSSTOG00000020510	GPATCH4	89	46.774	Ictidomys_tridecemlineatus
ENSXCOG00000003911	gpatch4	99	60.459	ENSKMAG00000015765	gpatch4	96	62.534	Kryptolebias_marmoratus
ENSXCOG00000003911	gpatch4	58	73.009	ENSLBEG00000009364	-	99	52.451	Labrus_bergylta
ENSXCOG00000003911	gpatch4	94	53.041	ENSLBEG00000016296	gpatch4	59	66.412	Labrus_bergylta
ENSXCOG00000003911	gpatch4	55	60.096	ENSLACG00000009700	GPATCH4	71	54.400	Latimeria_chalumnae
ENSXCOG00000003911	gpatch4	55	62.617	ENSLOCG00000008820	gpatch4	61	62.617	Lepisosteus_oculatus
ENSXCOG00000003911	gpatch4	68	36.576	ENSLAFG00000028327	-	53	35.537	Loxodonta_africana
ENSXCOG00000003911	gpatch4	51	46.354	ENSMFAG00000030965	GPATCH4	90	38.971	Macaca_fascicularis
ENSXCOG00000003911	gpatch4	51	46.875	ENSMMUG00000002624	GPATCH4	90	39.706	Macaca_mulatta
ENSXCOG00000003911	gpatch4	51	46.875	ENSMNEG00000028844	GPATCH4	90	39.706	Macaca_nemestrina
ENSXCOG00000003911	gpatch4	51	46.354	ENSMLEG00000037909	GPATCH4	90	40.000	Mandrillus_leucophaeus
ENSXCOG00000003911	gpatch4	65	64.552	ENSMAMG00000010151	gpatch4	63	64.684	Mastacembelus_armatus
ENSXCOG00000003911	gpatch4	66	72.112	ENSMZEG00005017452	gpatch4	65	72.510	Maylandia_zebra
ENSXCOG00000003911	gpatch4	54	43.564	ENSMICG00000013624	GPATCH4	59	39.914	Microcebus_murinus
ENSXCOG00000003911	gpatch4	54	48.039	ENSMODG00000016818	-	74	44.783	Monodelphis_domestica
ENSXCOG00000003911	gpatch4	56	45.498	ENSMODG00000014154	-	97	45.498	Monodelphis_domestica
ENSXCOG00000003911	gpatch4	98	52.518	ENSMALG00000003793	gpatch4	62	67.176	Monopterus_albus
ENSXCOG00000003911	gpatch4	57	43.925	MGP_CAROLIEiJ_G0025152	Gpatch4	92	41.880	Mus_caroli
ENSXCOG00000003911	gpatch4	57	43.458	ENSMUSG00000028069	Gpatch4	92	41.453	Mus_musculus
ENSXCOG00000003911	gpatch4	57	43.925	MGP_PahariEiJ_G0026595	-	92	41.880	Mus_pahari
ENSXCOG00000003911	gpatch4	57	43.458	MGP_SPRETEiJ_G0026093	Gpatch4	92	41.453	Mus_spretus
ENSXCOG00000003911	gpatch4	51	44.271	ENSMLUG00000009571	GPATCH4	51	40.833	Myotis_lucifugus
ENSXCOG00000003911	gpatch4	52	46.667	ENSNLEG00000027678	GPATCH4	56	42.291	Nomascus_leucogenys
ENSXCOG00000003911	gpatch4	54	41.872	ENSMEUG00000006861	-	77	40.260	Notamacropus_eugenii
ENSXCOG00000003911	gpatch4	55	45.933	ENSOPRG00000000586	GPATCH4	52	40.909	Ochotona_princeps
ENSXCOG00000003911	gpatch4	66	71.937	ENSONIG00000002261	gpatch4	63	72.332	Oreochromis_niloticus
ENSXCOG00000003911	gpatch4	59	71.366	ENSORLG00020013892	gpatch4	94	52.219	Oryzias_latipes_hni
ENSXCOG00000003911	gpatch4	55	74.762	ENSORLG00015019725	gpatch4	94	52.846	Oryzias_latipes_hsok
ENSXCOG00000003911	gpatch4	56	58.019	ENSOMEG00000000529	gpatch4	94	44.086	Oryzias_melastigma
ENSXCOG00000003911	gpatch4	54	43.564	ENSOGAG00000006698	-	53	40.249	Otolemur_garnettii
ENSXCOG00000003911	gpatch4	53	43.719	ENSOARG00000006123	GPATCH4	54	38.800	Ovis_aries
ENSXCOG00000003911	gpatch4	56	45.238	ENSPPAG00000028364	-	78	44.068	Pan_paniscus
ENSXCOG00000003911	gpatch4	52	45.918	ENSPTIG00000006717	GPATCH4	88	43.284	Panthera_tigris_altaica
ENSXCOG00000003911	gpatch4	56	45.238	ENSPTRG00000001464	GPATCH4	78	44.068	Pan_troglodytes
ENSXCOG00000003911	gpatch4	51	46.875	ENSPANG00000018543	GPATCH4	90	39.706	Papio_anubis
ENSXCOG00000003911	gpatch4	55	60.287	ENSPSIG00000011317	GPATCH4	72	60.287	Pelodiscus_sinensis
ENSXCOG00000003911	gpatch4	54	56.190	ENSPMAG00000009175	gpatch4	69	57.711	Petromyzon_marinus
ENSXCOG00000003911	gpatch4	100	86.154	ENSPFOG00000011835	gpatch4	100	85.385	Poecilia_formosa
ENSXCOG00000003911	gpatch4	100	85.825	ENSPLAG00000019504	gpatch4	100	85.052	Poecilia_latipinna
ENSXCOG00000003911	gpatch4	100	87.306	ENSPMEG00000001375	gpatch4	100	87.047	Poecilia_mexicana
ENSXCOG00000003911	gpatch4	92	85.989	ENSPREG00000017029	gpatch4	98	85.165	Poecilia_reticulata
ENSXCOG00000003911	gpatch4	66	72.112	ENSPNYG00000018461	gpatch4	64	72.510	Pundamilia_nyererei
ENSXCOG00000003911	gpatch4	55	74.038	ENSPNAG00000012535	gpatch4	54	61.240	Pygocentrus_nattereri
ENSXCOG00000003911	gpatch4	57	43.458	ENSRNOG00000018969	Gpatch4	54	41.880	Rattus_norvegicus
ENSXCOG00000003911	gpatch4	51	46.875	ENSRBIG00000005742	GPATCH4	78	44.068	Rhinopithecus_bieti
ENSXCOG00000003911	gpatch4	51	46.875	ENSRROG00000044157	GPATCH4	78	44.068	Rhinopithecus_roxellana
ENSXCOG00000003911	gpatch4	55	43.810	ENSSHAG00000015436	-	80	41.975	Sarcophilus_harrisii
ENSXCOG00000003911	gpatch4	66	66.052	ENSSMAG00000016329	gpatch4	61	66.052	Scophthalmus_maximus
ENSXCOG00000003911	gpatch4	54	77.778	ENSSDUG00000006583	gpatch4	99	53.717	Seriola_dumerili
ENSXCOG00000003911	gpatch4	54	77.778	ENSSLDG00000012365	gpatch4	98	53.181	Seriola_lalandi_dorsalis
ENSXCOG00000003911	gpatch4	53	60.804	ENSSPUG00000002674	GPATCH4	66	60.804	Sphenodon_punctatus
ENSXCOG00000003911	gpatch4	66	67.669	ENSSPAG00000011683	gpatch4	97	56.489	Stegastes_partitus
ENSXCOG00000003911	gpatch4	56	44.076	ENSSSCG00000006481	GPATCH4	51	43.038	Sus_scrofa
ENSXCOG00000003911	gpatch4	53	71.981	ENSTNIG00000005156	gpatch4	84	65.600	Tetraodon_nigroviridis
ENSXCOG00000003911	gpatch4	53	42.714	ENSTTRG00000001113	GPATCH4	58	38.710	Tursiops_truncatus
ENSXCOG00000003911	gpatch4	56	39.583	ENSVVUG00000006004	-	82	46.610	Vulpes_vulpes
ENSXCOG00000003911	gpatch4	54	63.235	ENSXETG00000020397	gpatch4	75	56.790	Xenopus_tropicalis
ENSXCOG00000003911	gpatch4	100	92.428	ENSXMAG00000024520	gpatch4	100	92.428	Xiphophorus_maculatus