EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000003913 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 5248 bases
Position: chrKQ557225.1:36813322-36818569
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000004989	MMR_HSR1	PF01926.23	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000005049	-	567	-	ENSXCOP00000004989	188 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000003913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000003913's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000003913	-	87	56.548	ENSXCOG00000008517	-	52	56.548
ENSXCOG00000003913	-	87	39.766	ENSXCOG00000019639	-	65	39.766

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000003913	-	95	45.652	ENSACIG00000004521	-	65	45.652	Amphilophus_citrinellus
ENSXCOG00000003913	-	87	48.214	ENSACIG00000004501	-	59	48.214	Amphilophus_citrinellus
ENSXCOG00000003913	-	87	49.704	ENSACIG00000000741	-	60	49.704	Amphilophus_citrinellus
ENSXCOG00000003913	-	87	47.619	ENSACIG00000015616	-	60	48.171	Amphilophus_citrinellus
ENSXCOG00000003913	-	85	47.904	ENSACIG00000004444	-	59	47.904	Amphilophus_citrinellus
ENSXCOG00000003913	-	85	49.697	ENSACIG00000004426	-	57	49.697	Amphilophus_citrinellus
ENSXCOG00000003913	-	87	43.787	ENSACIG00000015684	-	60	43.787	Amphilophus_citrinellus
ENSXCOG00000003913	-	77	44.000	ENSACIG00000015237	-	59	44.000	Amphilophus_citrinellus
ENSXCOG00000003913	-	91	45.455	ENSACIG00000004408	-	60	45.455	Amphilophus_citrinellus
ENSXCOG00000003913	-	86	51.205	ENSAOCG00000002056	-	54	51.205	Amphiprion_ocellaris
ENSXCOG00000003913	-	87	49.704	ENSAPEG00000021053	-	59	49.704	Amphiprion_percula
ENSXCOG00000003913	-	87	42.353	ENSATEG00000002718	-	53	42.353	Anabas_testudineus
ENSXCOG00000003913	-	87	49.091	ENSATEG00000002869	-	59	49.091	Anabas_testudineus
ENSXCOG00000003913	-	87	34.524	ENSACLG00000016390	-	59	34.524	Astatotilapia_calliptera
ENSXCOG00000003913	-	87	41.317	ENSACLG00000018321	-	59	42.012	Astatotilapia_calliptera
ENSXCOG00000003913	-	87	42.012	ENSACLG00000010292	-	59	42.012	Astatotilapia_calliptera
ENSXCOG00000003913	-	88	40.361	ENSACLG00000002020	-	64	40.361	Astatotilapia_calliptera
ENSXCOG00000003913	-	87	47.904	ENSACLG00000016487	-	55	47.904	Astatotilapia_calliptera
ENSXCOG00000003913	-	87	40.719	ENSACLG00000027615	-	61	40.719	Astatotilapia_calliptera
ENSXCOG00000003913	-	87	40.244	ENSAMXG00000037563	-	61	40.244	Astyanax_mexicanus
ENSXCOG00000003913	-	87	39.053	ENSCSEG00000018832	-	62	39.053	Cynoglossus_semilaevis
ENSXCOG00000003913	-	87	37.059	ENSCVAG00000016719	-	59	37.059	Cyprinodon_variegatus
ENSXCOG00000003913	-	87	55.952	ENSCVAG00000023166	-	64	55.952	Cyprinodon_variegatus
ENSXCOG00000003913	-	83	70.370	ENSCVAG00000007214	-	64	70.370	Cyprinodon_variegatus
ENSXCOG00000003913	-	88	37.931	ENSCVAG00000014640	-	79	37.931	Cyprinodon_variegatus
ENSXCOG00000003913	-	93	34.066	ENSDARG00000029720	si:dkeyp-9d4.2	62	35.165	Danio_rerio
ENSXCOG00000003913	-	71	41.606	ENSDARG00000075791	si:dkey-79f11.5	50	39.241	Danio_rerio
ENSXCOG00000003913	-	80	37.013	ENSDARG00000010729	CABZ01073795.1	53	37.013	Danio_rerio
ENSXCOG00000003913	-	87	34.682	ENSDARG00000095309	si:dkey-79f11.9	61	34.682	Danio_rerio
ENSXCOG00000003913	-	84	36.420	ENSDARG00000092634	CABZ01000634.1	55	36.420	Danio_rerio
ENSXCOG00000003913	-	87	38.462	ENSDARG00000107486	CR855320.3	57	38.462	Danio_rerio
ENSXCOG00000003913	-	87	35.714	ENSDARG00000093857	si:dkey-79f11.10	53	35.714	Danio_rerio
ENSXCOG00000003913	-	87	39.286	ENSDARG00000015678	si:dkeyp-75b4.9	79	39.286	Danio_rerio
ENSXCOG00000003913	-	87	39.521	ENSDARG00000095673	si:dkey-79f11.8	52	39.521	Danio_rerio
ENSXCOG00000003913	-	87	37.725	ENSDARG00000092361	si:dkey-79f11.7	71	37.725	Danio_rerio
ENSXCOG00000003913	-	86	43.713	ENSFHEG00000018069	-	56	43.713	Fundulus_heteroclitus
ENSXCOG00000003913	-	87	69.412	ENSFHEG00000019992	-	57	69.412	Fundulus_heteroclitus
ENSXCOG00000003913	-	87	44.643	ENSFHEG00000018078	-	60	44.643	Fundulus_heteroclitus
ENSXCOG00000003913	-	87	65.294	ENSFHEG00000021105	-	57	65.294	Fundulus_heteroclitus
ENSXCOG00000003913	-	85	37.576	ENSGAFG00000019422	-	63	37.576	Gambusia_affinis
ENSXCOG00000003913	-	87	50.289	ENSGACG00000001319	-	62	50.289	Gasterosteus_aculeatus
ENSXCOG00000003913	-	87	50.289	ENSGACG00000012556	-	54	50.289	Gasterosteus_aculeatus
ENSXCOG00000003913	-	87	49.711	ENSGACG00000012548	-	57	49.711	Gasterosteus_aculeatus
ENSXCOG00000003913	-	78	49.342	ENSHBUG00000010945	-	57	49.342	Haplochromis_burtoni
ENSXCOG00000003913	-	91	37.356	ENSIPUG00000006725	-	84	37.356	Ictalurus_punctatus
ENSXCOG00000003913	-	81	45.860	ENSIPUG00000005624	-	57	45.860	Ictalurus_punctatus
ENSXCOG00000003913	-	87	46.108	ENSKMAG00000000325	-	60	46.108	Kryptolebias_marmoratus
ENSXCOG00000003913	-	87	48.214	ENSKMAG00000000369	-	63	48.214	Kryptolebias_marmoratus
ENSXCOG00000003913	-	87	60.119	ENSKMAG00000006729	-	63	60.119	Kryptolebias_marmoratus
ENSXCOG00000003913	-	87	48.521	ENSMAMG00000003570	-	59	48.521	Mastacembelus_armatus
ENSXCOG00000003913	-	87	40.936	ENSMAMG00000003546	-	57	40.936	Mastacembelus_armatus
ENSXCOG00000003913	-	87	49.405	ENSMZEG00005008329	-	63	49.405	Maylandia_zebra
ENSXCOG00000003913	-	87	42.604	ENSMZEG00005015498	-	59	42.604	Maylandia_zebra
ENSXCOG00000003913	-	87	47.619	ENSMZEG00005008301	-	62	47.619	Maylandia_zebra
ENSXCOG00000003913	-	87	48.171	ENSNBRG00000020806	-	56	48.171	Neolamprologus_brichardi
ENSXCOG00000003913	-	87	43.195	ENSNBRG00000023290	-	57	43.195	Neolamprologus_brichardi
ENSXCOG00000003913	-	87	48.214	ENSNBRG00000006386	-	63	48.214	Neolamprologus_brichardi
ENSXCOG00000003913	-	87	47.059	ENSNBRG00000020781	-	67	47.059	Neolamprologus_brichardi
ENSXCOG00000003913	-	85	39.634	ENSNBRG00000020744	-	50	39.634	Neolamprologus_brichardi
ENSXCOG00000003913	-	85	46.626	ENSNBRG00000022075	-	58	46.341	Neolamprologus_brichardi
ENSXCOG00000003913	-	87	42.012	ENSNBRG00000024253	-	57	42.012	Neolamprologus_brichardi
ENSXCOG00000003913	-	88	39.181	ENSONIG00000018790	-	58	39.655	Oreochromis_niloticus
ENSXCOG00000003913	-	87	48.214	ENSONIG00000015247	-	59	48.214	Oreochromis_niloticus
ENSXCOG00000003913	-	87	47.619	ENSONIG00000015167	-	64	47.619	Oreochromis_niloticus
ENSXCOG00000003913	-	87	45.882	ENSONIG00000012319	-	64	45.882	Oreochromis_niloticus
ENSXCOG00000003913	-	82	47.500	ENSONIG00000012317	-	64	47.500	Oreochromis_niloticus
ENSXCOG00000003913	-	82	58.065	ENSONIG00000016843	-	63	58.065	Oreochromis_niloticus
ENSXCOG00000003913	-	78	48.026	ENSONIG00000013227	-	83	48.026	Oreochromis_niloticus
ENSXCOG00000003913	-	85	45.122	ENSONIG00000015371	-	63	45.122	Oreochromis_niloticus
ENSXCOG00000003913	-	83	46.012	ENSONIG00000017465	-	64	46.012	Oreochromis_niloticus
ENSXCOG00000003913	-	87	52.353	ENSPMGG00000002695	-	65	52.353	Periophthalmus_magnuspinnatus
ENSXCOG00000003913	-	86	52.121	ENSPMGG00000004994	-	56	52.121	Periophthalmus_magnuspinnatus
ENSXCOG00000003913	-	76	48.299	ENSPMGG00000012906	-	53	48.299	Periophthalmus_magnuspinnatus
ENSXCOG00000003913	-	87	54.762	ENSPFOG00000003807	-	59	54.762	Poecilia_formosa
ENSXCOG00000003913	-	87	49.102	ENSPFOG00000015455	-	56	49.102	Poecilia_formosa
ENSXCOG00000003913	-	87	54.217	ENSPFOG00000003841	-	57	54.217	Poecilia_formosa
ENSXCOG00000003913	-	87	39.181	ENSPFOG00000015382	-	59	39.181	Poecilia_formosa
ENSXCOG00000003913	-	87	38.596	ENSPFOG00000015493	-	58	38.596	Poecilia_formosa
ENSXCOG00000003913	-	87	87.195	ENSPLAG00000018274	-	58	87.195	Poecilia_latipinna
ENSXCOG00000003913	-	87	39.181	ENSPMEG00000018635	-	59	39.181	Poecilia_mexicana
ENSXCOG00000003913	-	87	48.503	ENSPMEG00000018626	-	59	48.503	Poecilia_mexicana
ENSXCOG00000003913	-	87	54.819	ENSPREG00000005137	-	58	55.118	Poecilia_reticulata
ENSXCOG00000003913	-	83	44.720	ENSPNYG00000024019	-	55	44.720	Pundamilia_nyererei
ENSXCOG00000003913	-	87	48.810	ENSPNYG00000005478	-	58	48.810	Pundamilia_nyererei
ENSXCOG00000003913	-	87	43.195	ENSPNYG00000001584	-	59	43.195	Pundamilia_nyererei
ENSXCOG00000003913	-	87	43.373	ENSPNAG00000009266	-	61	43.373	Pygocentrus_nattereri
ENSXCOG00000003913	-	87	43.636	ENSSDUG00000002417	-	62	43.636	Seriola_dumerili
ENSXCOG00000003913	-	87	43.030	ENSSDUG00000002359	-	61	43.030	Seriola_dumerili
ENSXCOG00000003913	-	87	59.524	ENSSLDG00000016397	-	62	59.524	Seriola_lalandi_dorsalis
ENSXCOG00000003913	-	87	45.455	ENSSLDG00000008952	-	58	44.643	Seriola_lalandi_dorsalis
ENSXCOG00000003913	-	91	50.282	ENSSPAG00000012915	-	66	50.282	Stegastes_partitus
ENSXCOG00000003913	-	87	50.296	ENSSPAG00000012856	-	59	50.296	Stegastes_partitus
ENSXCOG00000003913	-	87	91.124	ENSXMAG00000029117	-	60	91.124	Xiphophorus_maculatus
ENSXCOG00000003913	-	87	38.372	ENSXMAG00000009973	-	60	38.372	Xiphophorus_maculatus