EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000003923 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 2210 bases
Position: chrKQ557225.1:36905313-36907522
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000005003	MMR_HSR1	PF01926.23	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000005063	-	612	-	ENSXCOP00000005003	203 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000003923's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000003923's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000003923	-	86	36.207	ENSXCOG00000005902	arl3	79	36.207
ENSXCOG00000003923	-	83	39.881	ENSXCOG00000017380	arl5c	90	39.881
ENSXCOG00000003923	-	83	34.524	ENSXCOG00000011060	arl11	94	34.524
ENSXCOG00000003923	-	62	35.200	ENSXCOG00000004160	sar1b	58	35.200
ENSXCOG00000003923	-	85	31.034	ENSXCOG00000013402	arl8ba	98	31.034
ENSXCOG00000003923	-	78	37.342	ENSXCOG00000002882	-	84	37.342
ENSXCOG00000003923	-	84	46.893	ENSXCOG00000004139	arf2b	94	46.893
ENSXCOG00000003923	-	84	45.614	ENSXCOG00000020384	-	91	45.614
ENSXCOG00000003923	-	58	30.081	ENSXCOG00000009194	-	85	30.081
ENSXCOG00000003923	-	91	83.784	ENSXCOG00000016119	arl4cb	92	83.784
ENSXCOG00000003923	-	99	59.406	ENSXCOG00000003892	arl4d	99	59.406
ENSXCOG00000003923	-	93	41.053	ENSXCOG00000003337	arl3l2	95	41.053
ENSXCOG00000003923	-	83	40.351	ENSXCOG00000011539	arl8	74	40.351
ENSXCOG00000003923	-	81	47.273	ENSXCOG00000016687	-	86	47.273
ENSXCOG00000003923	-	85	38.953	ENSXCOG00000006377	arl2	90	38.953
ENSXCOG00000003923	-	91	67.027	ENSXCOG00000007236	arl4aa	92	67.027
ENSXCOG00000003923	-	68	32.143	ENSXCOG00000016886	arl8a	71	32.143
ENSXCOG00000003923	-	81	47.879	ENSXCOG00000001487	-	90	47.879
ENSXCOG00000003923	-	81	47.273	ENSXCOG00000015162	-	88	47.273
ENSXCOG00000003923	-	59	30.328	ENSXCOG00000013842	rab1ab	58	30.328
ENSXCOG00000003923	-	85	45.665	ENSXCOG00000019704	arf3b	90	47.879
ENSXCOG00000003923	-	68	35.000	ENSXCOG00000004543	arl8bb	72	35.000
ENSXCOG00000003923	-	74	36.420	ENSXCOG00000009364	arfrp1	79	36.420

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000003923	-	91	82.162	ENSG00000188042	ARL4C	96	82.162	Homo_sapiens
ENSXCOG00000003923	-	91	82.703	ENSAPOG00000023273	arl4cb	96	82.703	Acanthochromis_polyacanthus
ENSXCOG00000003923	-	91	82.162	ENSAMEG00000016052	ARL4C	77	82.162	Ailuropoda_melanoleuca
ENSXCOG00000003923	-	85	95.376	ENSACIG00000024420	-	94	94.595	Amphilophus_citrinellus
ENSXCOG00000003923	-	91	83.243	ENSACIG00000000312	arl4cb	96	83.243	Amphilophus_citrinellus
ENSXCOG00000003923	-	91	82.703	ENSAPEG00000019862	arl4cb	96	82.703	Amphiprion_percula
ENSXCOG00000003923	-	91	94.054	ENSATEG00000013007	-	95	94.054	Anabas_testudineus
ENSXCOG00000003923	-	91	82.703	ENSATEG00000019469	arl4cb	96	82.703	Anabas_testudineus
ENSXCOG00000003923	-	91	82.703	ENSAPLG00000015708	ARL4C	96	82.703	Anas_platyrhynchos
ENSXCOG00000003923	-	91	83.243	ENSACAG00000010087	ARL4C	96	83.243	Anolis_carolinensis
ENSXCOG00000003923	-	91	82.162	ENSANAG00000038361	ARL4C	92	82.162	Aotus_nancymaae
ENSXCOG00000003923	-	85	95.376	ENSACLG00000014159	-	95	94.595	Astatotilapia_calliptera
ENSXCOG00000003923	-	91	82.703	ENSACLG00000014218	arl4cb	96	82.703	Astatotilapia_calliptera
ENSXCOG00000003923	-	91	85.405	ENSAMXG00000024926	arl4cb	96	85.405	Astyanax_mexicanus
ENSXCOG00000003923	-	91	73.514	ENSAMXG00000024897	-	95	73.514	Astyanax_mexicanus
ENSXCOG00000003923	-	91	82.162	ENSCJAG00000042179	ARL4C	92	82.162	Callithrix_jacchus
ENSXCOG00000003923	-	89	81.667	ENSCAFG00000012001	ARL4C	99	81.667	Canis_familiaris
ENSXCOG00000003923	-	91	82.162	ENSCAFG00020024408	ARL4C	96	82.162	Canis_lupus_dingo
ENSXCOG00000003923	-	91	82.162	ENSCHIG00000008457	ARL4C	96	82.162	Capra_hircus
ENSXCOG00000003923	-	91	82.162	ENSTSYG00000033922	ARL4C	92	82.162	Carlito_syrichta
ENSXCOG00000003923	-	91	82.162	ENSCCAG00000024558	ARL4C	92	82.162	Cebus_capucinus
ENSXCOG00000003923	-	91	82.162	ENSCATG00000041801	ARL4C	91	82.162	Cercocebus_atys
ENSXCOG00000003923	-	91	82.162	ENSCLAG00000010525	ARL4C	95	82.162	Chinchilla_lanigera
ENSXCOG00000003923	-	91	82.162	ENSCSAG00000018795	ARL4C	96	82.162	Chlorocebus_sabaeus
ENSXCOG00000003923	-	91	83.243	ENSCPBG00000024707	ARL4C	96	83.243	Chrysemys_picta_bellii
ENSXCOG00000003923	-	91	82.162	ENSCANG00000035065	ARL4C	91	82.162	Colobus_angolensis_palliatus
ENSXCOG00000003923	-	91	82.162	ENSCGRG00001010866	Arl4c	96	82.162	Cricetulus_griseus_chok1gshd
ENSXCOG00000003923	-	91	82.162	ENSCGRG00000018449	Arl4c	96	82.162	Cricetulus_griseus_crigri
ENSXCOG00000003923	-	91	85.405	ENSCSEG00000000838	arl4cb	85	85.405	Cynoglossus_semilaevis
ENSXCOG00000003923	-	88	94.972	ENSCSEG00000005387	-	94	94.972	Cynoglossus_semilaevis
ENSXCOG00000003923	-	91	96.757	ENSCVAG00000023139	-	95	96.757	Cyprinodon_variegatus
ENSXCOG00000003923	-	91	85.326	ENSCVAG00000020902	arl4cb	95	85.326	Cyprinodon_variegatus
ENSXCOG00000003923	-	91	82.703	ENSDARG00000057606	arl4ca	96	82.703	Danio_rerio
ENSXCOG00000003923	-	91	82.703	ENSDARG00000032708	arl4cb	96	82.703	Danio_rerio
ENSXCOG00000003923	-	91	82.162	ENSDNOG00000045362	ARL4C	96	82.162	Dasypus_novemcinctus
ENSXCOG00000003923	-	91	82.162	ENSDORG00000028955	Arl4c	96	82.162	Dipodomys_ordii
ENSXCOG00000003923	-	75	67.974	ENSEBUG00000004741	arl4cb	74	67.974	Eptatretus_burgeri
ENSXCOG00000003923	-	91	82.162	ENSEASG00005019989	ARL4C	96	82.162	Equus_asinus_asinus
ENSXCOG00000003923	-	91	82.609	ENSEEUG00000012728	ARL4C	96	82.609	Erinaceus_europaeus
ENSXCOG00000003923	-	92	84.492	ENSELUG00000015699	arl4ca	98	84.492	Esox_lucius
ENSXCOG00000003923	-	91	82.703	ENSELUG00000004400	arl4cb	96	82.703	Esox_lucius
ENSXCOG00000003923	-	91	82.162	ENSFCAG00000033226	ARL4C	91	82.162	Felis_catus
ENSXCOG00000003923	-	91	82.703	ENSFALG00000015098	ARL4C	96	82.703	Ficedula_albicollis
ENSXCOG00000003923	-	91	82.162	ENSFDAG00000000777	ARL4C	96	82.162	Fukomys_damarensis
ENSXCOG00000003923	-	91	84.324	ENSFHEG00000009894	arl4cb	93	84.324	Fundulus_heteroclitus
ENSXCOG00000003923	-	91	96.216	ENSFHEG00000013017	-	95	96.216	Fundulus_heteroclitus
ENSXCOG00000003923	-	91	83.784	ENSGMOG00000020467	arl4cb	96	83.784	Gadus_morhua
ENSXCOG00000003923	-	87	81.818	ENSGALG00000052743	ARL4C	100	81.818	Gallus_gallus
ENSXCOG00000003923	-	91	84.324	ENSGAFG00000020556	arl4cb	95	84.324	Gambusia_affinis
ENSXCOG00000003923	-	91	82.703	ENSGACG00000008143	arl4cb	96	82.703	Gasterosteus_aculeatus
ENSXCOG00000003923	-	91	83.243	ENSGAGG00000013550	ARL4C	96	83.243	Gopherus_agassizii
ENSXCOG00000003923	-	91	82.162	ENSGGOG00000023462	ARL4C	92	82.162	Gorilla_gorilla
ENSXCOG00000003923	-	91	82.703	ENSHBUG00000002490	arl4cb	96	82.703	Haplochromis_burtoni
ENSXCOG00000003923	-	85	95.376	ENSHBUG00000009561	-	95	94.595	Haplochromis_burtoni
ENSXCOG00000003923	-	91	82.162	ENSHGLG00000020294	ARL4C	96	82.162	Heterocephalus_glaber_female
ENSXCOG00000003923	-	91	92.432	ENSHCOG00000008233	arl4cb	92	92.432	Hippocampus_comes
ENSXCOG00000003923	-	90	79.781	ENSIPUG00000006298	-	95	79.781	Ictalurus_punctatus
ENSXCOG00000003923	-	91	84.865	ENSIPUG00000002122	arl4cb	96	84.865	Ictalurus_punctatus
ENSXCOG00000003923	-	91	82.162	ENSSTOG00000023217	ARL4C	96	82.162	Ictidomys_tridecemlineatus
ENSXCOG00000003923	-	91	82.703	ENSJJAG00000010006	Arl4c	96	82.703	Jaculus_jaculus
ENSXCOG00000003923	-	91	83.784	ENSKMAG00000011334	arl4cb	96	83.784	Kryptolebias_marmoratus
ENSXCOG00000003923	-	91	83.243	ENSLBEG00000012677	arl4cb	96	83.243	Labrus_bergylta
ENSXCOG00000003923	-	91	94.022	ENSLBEG00000010335	-	95	94.022	Labrus_bergylta
ENSXCOG00000003923	-	91	85.405	ENSLACG00000015350	ARL4C	92	85.405	Latimeria_chalumnae
ENSXCOG00000003923	-	91	82.703	ENSLOCG00000017842	arl4cb	94	82.703	Lepisosteus_oculatus
ENSXCOG00000003923	-	91	82.162	ENSLAFG00000028097	ARL4C	96	82.162	Loxodonta_africana
ENSXCOG00000003923	-	91	82.162	ENSMFAG00000045232	ARL4C	91	82.162	Macaca_fascicularis
ENSXCOG00000003923	-	91	82.162	ENSMMUG00000011516	ARL4C	96	82.162	Macaca_mulatta
ENSXCOG00000003923	-	91	82.162	ENSMNEG00000031224	ARL4C	91	82.162	Macaca_nemestrina
ENSXCOG00000003923	-	91	82.162	ENSMLEG00000027620	ARL4C	91	82.162	Mandrillus_leucophaeus
ENSXCOG00000003923	-	91	94.054	ENSMAMG00000022482	-	93	94.054	Mastacembelus_armatus
ENSXCOG00000003923	-	91	82.703	ENSMAMG00000013367	arl4cb	96	82.703	Mastacembelus_armatus
ENSXCOG00000003923	-	91	82.703	ENSMZEG00005020500	arl4cb	96	82.703	Maylandia_zebra
ENSXCOG00000003923	-	85	81.503	ENSMGAG00000016127	ARL4C	99	81.503	Meleagris_gallopavo
ENSXCOG00000003923	-	91	82.162	ENSMICG00000017503	ARL4C	90	82.162	Microcebus_murinus
ENSXCOG00000003923	-	91	82.162	ENSMOCG00000006232	Arl4c	96	82.162	Microtus_ochrogaster
ENSXCOG00000003923	-	91	83.243	ENSMODG00000023112	ARL4C	96	83.243	Monodelphis_domestica
ENSXCOG00000003923	-	91	93.514	ENSMALG00000006786	-	93	93.514	Monopterus_albus
ENSXCOG00000003923	-	91	83.243	ENSMALG00000011378	arl4cb	96	83.243	Monopterus_albus
ENSXCOG00000003923	-	91	82.162	MGP_CAROLIEiJ_G0014402	Arl4c	96	82.162	Mus_caroli
ENSXCOG00000003923	-	91	82.162	ENSMUSG00000049866	Arl4c	96	82.162	Mus_musculus
ENSXCOG00000003923	-	91	82.162	MGP_PahariEiJ_G0027638	Arl4c	96	82.162	Mus_pahari
ENSXCOG00000003923	-	91	82.162	MGP_SPRETEiJ_G0015206	Arl4c	96	82.162	Mus_spretus
ENSXCOG00000003923	-	91	82.162	ENSMPUG00000019267	ARL4C	96	82.162	Mustela_putorius_furo
ENSXCOG00000003923	-	91	82.162	ENSNGAG00000012405	Arl4c	96	82.162	Nannospalax_galili
ENSXCOG00000003923	-	91	82.703	ENSNBRG00000020745	arl4cb	93	82.703	Neolamprologus_brichardi
ENSXCOG00000003923	-	85	95.376	ENSNBRG00000015182	-	94	94.595	Neolamprologus_brichardi
ENSXCOG00000003923	-	91	82.162	ENSMEUG00000006551	ARL4C	92	82.162	Notamacropus_eugenii
ENSXCOG00000003923	-	91	82.162	ENSODEG00000019668	ARL4C	96	82.162	Octodon_degus
ENSXCOG00000003923	-	85	95.376	ENSONIG00000021039	arl4ca	94	94.595	Oreochromis_niloticus
ENSXCOG00000003923	-	91	82.162	ENSOANG00000011765	ARL4C	96	82.162	Ornithorhynchus_anatinus
ENSXCOG00000003923	-	91	82.162	ENSOCUG00000005758	ARL4C	96	82.162	Oryctolagus_cuniculus
ENSXCOG00000003923	-	91	83.784	ENSORLG00000013843	arl4cb	96	83.784	Oryzias_latipes
ENSXCOG00000003923	-	84	76.471	ENSORLG00000026726	-	94	75.275	Oryzias_latipes
ENSXCOG00000003923	-	84	77.647	ENSORLG00020011692	-	94	76.374	Oryzias_latipes_hni
ENSXCOG00000003923	-	91	83.784	ENSORLG00020007137	arl4cb	96	83.784	Oryzias_latipes_hni
ENSXCOG00000003923	-	91	83.784	ENSORLG00015009897	arl4cb	96	83.784	Oryzias_latipes_hsok
ENSXCOG00000003923	-	85	77.457	ENSORLG00015014008	-	96	75.676	Oryzias_latipes_hsok
ENSXCOG00000003923	-	91	83.784	ENSOMEG00000007253	arl4cb	96	83.784	Oryzias_melastigma
ENSXCOG00000003923	-	91	82.162	ENSOGAG00000034868	ARL4C	96	82.162	Otolemur_garnettii
ENSXCOG00000003923	-	91	80.000	ENSOARG00000025194	ARL4C	96	80.000	Ovis_aries
ENSXCOG00000003923	-	91	82.162	ENSPPAG00000002191	ARL4C	96	82.162	Pan_paniscus
ENSXCOG00000003923	-	91	82.162	ENSPPRG00000016572	ARL4C	96	82.162	Panthera_pardus
ENSXCOG00000003923	-	91	82.162	ENSPTIG00000011404	ARL4C	91	82.162	Panthera_tigris_altaica
ENSXCOG00000003923	-	91	82.162	ENSPTRG00000013065	ARL4C	92	82.162	Pan_troglodytes
ENSXCOG00000003923	-	91	82.162	ENSPANG00000006874	ARL4C	92	82.162	Papio_anubis
ENSXCOG00000003923	-	91	83.784	ENSPKIG00000008422	ARL4C	96	83.784	Paramormyrops_kingsleyae
ENSXCOG00000003923	-	91	82.703	ENSPKIG00000020450	arl4cb	96	82.703	Paramormyrops_kingsleyae
ENSXCOG00000003923	-	87	76.836	ENSPMGG00000014369	-	89	76.836	Periophthalmus_magnuspinnatus
ENSXCOG00000003923	-	91	82.162	ENSPEMG00000006610	Arl4c	96	82.162	Peromyscus_maniculatus_bairdii
ENSXCOG00000003923	-	91	82.162	ENSPCIG00000003836	ARL4C	96	82.162	Phascolarctos_cinereus
ENSXCOG00000003923	-	85	86.127	ENSPFOG00000020283	arl4cb	95	85.405	Poecilia_formosa
ENSXCOG00000003923	-	85	85.549	ENSPLAG00000007735	arl4cb	95	84.865	Poecilia_latipinna
ENSXCOG00000003923	-	85	85.549	ENSPMEG00000007028	arl4cb	92	84.865	Poecilia_mexicana
ENSXCOG00000003923	-	91	84.865	ENSPREG00000015645	arl4cb	95	84.865	Poecilia_reticulata
ENSXCOG00000003923	-	91	98.919	ENSPREG00000021699	-	96	98.919	Poecilia_reticulata
ENSXCOG00000003923	-	91	82.162	ENSPPYG00000013299	ARL4C	92	82.162	Pongo_abelii
ENSXCOG00000003923	-	91	82.162	ENSPCOG00000028187	ARL4C	90	82.162	Propithecus_coquereli
ENSXCOG00000003923	-	85	95.376	ENSPNYG00000021646	-	93	94.595	Pundamilia_nyererei
ENSXCOG00000003923	-	91	82.703	ENSPNYG00000012693	arl4cb	96	82.703	Pundamilia_nyererei
ENSXCOG00000003923	-	91	84.865	ENSPNAG00000028458	arl4cb	96	84.865	Pygocentrus_nattereri
ENSXCOG00000003923	-	91	72.432	ENSPNAG00000022337	-	96	72.432	Pygocentrus_nattereri
ENSXCOG00000003923	-	91	82.162	ENSRBIG00000032960	-	91	82.162	Rhinopithecus_bieti
ENSXCOG00000003923	-	91	82.162	ENSRROG00000029871	ARL4C	91	82.162	Rhinopithecus_roxellana
ENSXCOG00000003923	-	91	82.162	ENSSBOG00000033162	ARL4C	92	82.162	Saimiri_boliviensis_boliviensis
ENSXCOG00000003923	-	91	83.784	ENSSFOG00015007064	arl4cb	92	83.784	Scleropages_formosus
ENSXCOG00000003923	-	91	85.946	ENSSFOG00015018615	ARL4C	93	85.946	Scleropages_formosus
ENSXCOG00000003923	-	91	94.595	ENSSMAG00000013072	-	95	94.595	Scophthalmus_maximus
ENSXCOG00000003923	-	91	83.784	ENSSMAG00000016399	arl4cb	96	83.784	Scophthalmus_maximus
ENSXCOG00000003923	-	91	83.243	ENSSDUG00000012868	arl4cb	96	83.243	Seriola_dumerili
ENSXCOG00000003923	-	91	94.054	ENSSLDG00000012103	-	93	94.054	Seriola_lalandi_dorsalis
ENSXCOG00000003923	-	91	83.243	ENSSLDG00000017889	arl4cb	96	83.243	Seriola_lalandi_dorsalis
ENSXCOG00000003923	-	91	94.595	ENSSPAG00000022062	-	93	94.595	Stegastes_partitus
ENSXCOG00000003923	-	91	82.703	ENSSPAG00000010587	arl4cb	92	82.703	Stegastes_partitus
ENSXCOG00000003923	-	91	82.162	ENSSSCG00000034293	ARL4C	96	82.162	Sus_scrofa
ENSXCOG00000003923	-	91	82.703	ENSTGUG00000003095	ARL4C	96	82.703	Taeniopygia_guttata
ENSXCOG00000003923	-	91	84.865	ENSTRUG00000003085	arl4cb	96	84.865	Takifugu_rubripes
ENSXCOG00000003923	-	85	94.798	ENSTRUG00000003183	-	95	94.054	Takifugu_rubripes
ENSXCOG00000003923	-	85	93.064	ENSTNIG00000003426	-	92	92.432	Tetraodon_nigroviridis
ENSXCOG00000003923	-	91	82.162	ENSUAMG00000007888	ARL4C	96	82.162	Ursus_americanus
ENSXCOG00000003923	-	92	73.118	ENSUMAG00000013306	ARL4C	88	73.118	Ursus_maritimus
ENSXCOG00000003923	-	91	82.162	ENSVVUG00000025311	ARL4C	96	82.162	Vulpes_vulpes
ENSXCOG00000003923	-	91	85.405	ENSXETG00000010915	arl4c	95	85.405	Xenopus_tropicalis
ENSXCOG00000003923	-	91	84.324	ENSXMAG00000020364	arl4cb	93	84.324	Xiphophorus_maculatus
ENSXCOG00000003923	-	97	94.388	ENSXMAG00000000086	-	99	94.388	Xiphophorus_maculatus