EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000004111 (Gene tree)
Gene ID: -
Gene Symbol: mrpl48
Alias: im:7137854|zgc:112943
Full Name: mitochondrial ribosomal protein L48
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 4280 bases
Position: chrKQ557206.1:1650433-1654712
Accession: ZDB-GENE-041008-125
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000005252	Ribosomal_S10	PF00338.22	6.5e-16	1	1
ENSXCOP00000005253	Ribosomal_S10	PF00338.22	6.8e-16	1	1
ENSXCOP00000005256	Ribosomal_S10	PF00338.22	7.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000005317	-	645	-	ENSXCOP00000005256	214 (aa)	-	-
ENSXCOT00000005314	-	618	-	ENSXCOP00000005253	205 (aa)	-	-
ENSXCOT00000005313	-	600	-	ENSXCOP00000005252	199 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000004111's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000004111's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000004111	mrpl48	90	47.179	ENSG00000175581	MRPL48	100	65.385	Homo_sapiens
ENSXCOG00000004111	mrpl48	97	70.476	ENSAPOG00000013955	mrpl48	97	70.476	Acanthochromis_polyacanthus
ENSXCOG00000004111	mrpl48	95	49.738	ENSAMEG00000017282	MRPL48	90	49.738	Ailuropoda_melanoleuca
ENSXCOG00000004111	mrpl48	99	75.472	ENSACIG00000009743	mrpl48	91	78.652	Amphilophus_citrinellus
ENSXCOG00000004111	mrpl48	97	73.333	ENSAOCG00000004158	mrpl48	97	73.333	Amphiprion_ocellaris
ENSXCOG00000004111	mrpl48	97	73.333	ENSAPEG00000024029	mrpl48	97	73.333	Amphiprion_percula
ENSXCOG00000004111	mrpl48	95	70.202	ENSATEG00000012425	mrpl48	96	71.212	Anabas_testudineus
ENSXCOG00000004111	mrpl48	89	51.397	ENSAPLG00000008046	MRPL48	86	51.397	Anas_platyrhynchos
ENSXCOG00000004111	mrpl48	76	57.237	ENSACAG00000006382	MRPL48	77	55.488	Anolis_carolinensis
ENSXCOG00000004111	mrpl48	88	50.568	ENSANAG00000036546	MRPL48	90	47.179	Aotus_nancymaae
ENSXCOG00000004111	mrpl48	98	75.943	ENSACLG00000024077	mrpl48	98	75.943	Astatotilapia_calliptera
ENSXCOG00000004111	mrpl48	90	65.746	ENSAMXG00000006784	mrpl48	98	64.894	Astyanax_mexicanus
ENSXCOG00000004111	mrpl48	87	53.143	ENSBTAG00000008347	MRPL48	90	50.256	Bos_taurus
ENSXCOG00000004111	mrpl48	95	46.117	ENSCJAG00000015867	MRPL48	93	46.117	Callithrix_jacchus
ENSXCOG00000004111	mrpl48	95	47.895	ENSCAFG00000008462	-	89	47.895	Canis_familiaris
ENSXCOG00000004111	mrpl48	83	53.892	ENSCAFG00000005585	-	95	53.892	Canis_familiaris
ENSXCOG00000004111	mrpl48	50	50.000	ENSCAFG00020002202	-	64	44.094	Canis_lupus_dingo
ENSXCOG00000004111	mrpl48	89	50.838	ENSCHIG00000013981	MRPL48	90	48.718	Capra_hircus
ENSXCOG00000004111	mrpl48	90	49.744	ENSTSYG00000012895	MRPL48	90	49.744	Carlito_syrichta
ENSXCOG00000004111	mrpl48	88	51.685	ENSCPOG00000013291	MRPL48	84	51.685	Cavia_porcellus
ENSXCOG00000004111	mrpl48	92	42.574	ENSCCAG00000037377	-	90	42.574	Cebus_capucinus
ENSXCOG00000004111	mrpl48	92	46.040	ENSCCAG00000024861	-	93	46.040	Cebus_capucinus
ENSXCOG00000004111	mrpl48	88	51.136	ENSCATG00000008832	MRPL48	90	47.692	Cercocebus_atys
ENSXCOG00000004111	mrpl48	99	43.137	ENSCATG00000026811	-	100	43.137	Cercocebus_atys
ENSXCOG00000004111	mrpl48	83	52.695	ENSCLAG00000014653	MRPL48	86	49.462	Chinchilla_lanigera
ENSXCOG00000004111	mrpl48	96	50.000	ENSCSAG00000004059	MRPL48	89	50.000	Chlorocebus_sabaeus
ENSXCOG00000004111	mrpl48	96	41.969	ENSCHOG00000003662	MRPL48	100	41.969	Choloepus_hoffmanni
ENSXCOG00000004111	mrpl48	52	53.774	ENSCPBG00000000043	MRPL48	92	53.774	Chrysemys_picta_bellii
ENSXCOG00000004111	mrpl48	86	35.000	ENSCING00000013289	-	87	35.000	Ciona_intestinalis
ENSXCOG00000004111	mrpl48	82	32.164	ENSCSAVG00000006671	-	82	34.104	Ciona_savignyi
ENSXCOG00000004111	mrpl48	93	46.829	ENSCANG00000030769	MRPL48	95	46.829	Colobus_angolensis_palliatus
ENSXCOG00000004111	mrpl48	89	48.603	ENSCGRG00001021190	Mrpl48	90	47.179	Cricetulus_griseus_chok1gshd
ENSXCOG00000004111	mrpl48	89	48.603	ENSCGRG00000004097	Mrpl48	90	47.179	Cricetulus_griseus_crigri
ENSXCOG00000004111	mrpl48	98	61.611	ENSCSEG00000017376	mrpl48	98	61.611	Cynoglossus_semilaevis
ENSXCOG00000004111	mrpl48	98	80.476	ENSCVAG00000014692	mrpl48	98	80.476	Cyprinodon_variegatus
ENSXCOG00000004111	mrpl48	83	68.675	ENSDARG00000035167	mrpl48	80	68.675	Danio_rerio
ENSXCOG00000004111	mrpl48	83	52.695	ENSDNOG00000002177	MRPL48	100	50.568	Dasypus_novemcinctus
ENSXCOG00000004111	mrpl48	57	56.637	ENSDORG00000000644	-	100	56.637	Dipodomys_ordii
ENSXCOG00000004111	mrpl48	63	31.746	FBgn0031357	mRpL48	70	31.746	Drosophila_melanogaster
ENSXCOG00000004111	mrpl48	83	51.807	ENSETEG00000009413	MRPL48	65	51.807	Echinops_telfairi
ENSXCOG00000004111	mrpl48	97	38.384	ENSEBUG00000003240	mrpl48	95	38.579	Eptatretus_burgeri
ENSXCOG00000004111	mrpl48	91	51.648	ENSEASG00005017939	MRPL48	94	51.648	Equus_asinus_asinus
ENSXCOG00000004111	mrpl48	91	51.648	ENSECAG00000022115	MRPL48	90	49.231	Equus_caballus
ENSXCOG00000004111	mrpl48	96	68.557	ENSELUG00000008942	mrpl48	98	64.455	Esox_lucius
ENSXCOG00000004111	mrpl48	96	47.143	ENSFCAG00000025668	MRPL48	100	59.292	Felis_catus
ENSXCOG00000004111	mrpl48	83	51.497	ENSFALG00000008015	MRPL48	81	51.497	Ficedula_albicollis
ENSXCOG00000004111	mrpl48	96	45.238	ENSFDAG00000010990	MRPL48	97	45.238	Fukomys_damarensis
ENSXCOG00000004111	mrpl48	98	80.476	ENSFHEG00000020130	mrpl48	98	80.476	Fundulus_heteroclitus
ENSXCOG00000004111	mrpl48	85	69.591	ENSGMOG00000018272	mrpl48	99	69.591	Gadus_morhua
ENSXCOG00000004111	mrpl48	87	52.273	ENSGALG00000017319	MRPL48	84	52.273	Gallus_gallus
ENSXCOG00000004111	mrpl48	97	90.385	ENSGAFG00000004136	mrpl48	97	90.385	Gambusia_affinis
ENSXCOG00000004111	mrpl48	93	72.581	ENSGACG00000018902	mrpl48	99	67.925	Gasterosteus_aculeatus
ENSXCOG00000004111	mrpl48	89	55.866	ENSGAGG00000005045	MRPL48	90	51.795	Gopherus_agassizii
ENSXCOG00000004111	mrpl48	90	47.179	ENSGGOG00000022915	MRPL48	100	57.522	Gorilla_gorilla
ENSXCOG00000004111	mrpl48	84	43.407	ENSGGOG00000013682	-	88	43.407	Gorilla_gorilla
ENSXCOG00000004111	mrpl48	98	75.000	ENSHBUG00000002169	mrpl48	98	75.000	Haplochromis_burtoni
ENSXCOG00000004111	mrpl48	89	51.397	ENSHGLG00000006113	MRPL48	100	57.522	Heterocephalus_glaber_female
ENSXCOG00000004111	mrpl48	89	51.397	ENSHGLG00100014660	MRPL48	86	49.462	Heterocephalus_glaber_male
ENSXCOG00000004111	mrpl48	88	70.455	ENSHCOG00000013282	mrpl48	99	64.390	Hippocampus_comes
ENSXCOG00000004111	mrpl48	88	65.909	ENSIPUG00000021795	Mrpl48	90	63.021	Ictalurus_punctatus
ENSXCOG00000004111	mrpl48	87	49.425	ENSSTOG00000010694	MRPL48	86	46.237	Ictidomys_tridecemlineatus
ENSXCOG00000004111	mrpl48	96	67.308	ENSKMAG00000010818	mrpl48	97	67.308	Kryptolebias_marmoratus
ENSXCOG00000004111	mrpl48	90	70.466	ENSLBEG00000002181	mrpl48	93	70.466	Labrus_bergylta
ENSXCOG00000004111	mrpl48	90	46.409	ENSLACG00000004317	MRPL48	85	46.409	Latimeria_chalumnae
ENSXCOG00000004111	mrpl48	88	64.972	ENSLOCG00000006190	mrpl48	92	59.406	Lepisosteus_oculatus
ENSXCOG00000004111	mrpl48	88	51.977	ENSLAFG00000003800	MRPL48	100	53.107	Loxodonta_africana
ENSXCOG00000004111	mrpl48	89	50.838	ENSMFAG00000003172	MRPL48	93	47.692	Macaca_fascicularis
ENSXCOG00000004111	mrpl48	88	44.000	ENSMMUG00000008225	-	94	40.102	Macaca_mulatta
ENSXCOG00000004111	mrpl48	96	49.479	ENSMMUG00000014680	MRPL48	94	49.479	Macaca_mulatta
ENSXCOG00000004111	mrpl48	91	48.387	ENSMNEG00000043715	MRPL48	100	58.407	Macaca_nemestrina
ENSXCOG00000004111	mrpl48	88	44.571	ENSMNEG00000033728	-	92	42.051	Macaca_nemestrina
ENSXCOG00000004111	mrpl48	88	51.136	ENSMLEG00000025711	MRPL48	90	47.692	Mandrillus_leucophaeus
ENSXCOG00000004111	mrpl48	88	45.714	ENSMLEG00000043784	-	92	43.590	Mandrillus_leucophaeus
ENSXCOG00000004111	mrpl48	98	73.113	ENSMAMG00000011802	mrpl48	98	73.113	Mastacembelus_armatus
ENSXCOG00000004111	mrpl48	98	75.943	ENSMZEG00005021086	mrpl48	98	75.943	Maylandia_zebra
ENSXCOG00000004111	mrpl48	96	46.948	ENSMGAG00000015300	MRPL48	99	46.948	Meleagris_gallopavo
ENSXCOG00000004111	mrpl48	96	48.958	ENSMAUG00000000711	Mrpl48	91	48.958	Mesocricetus_auratus
ENSXCOG00000004111	mrpl48	90	47.179	ENSMICG00000012645	-	90	47.179	Microcebus_murinus
ENSXCOG00000004111	mrpl48	90	46.667	ENSMICG00000028005	-	80	46.667	Microcebus_murinus
ENSXCOG00000004111	mrpl48	57	59.292	ENSMOCG00000013808	Mrpl48	100	59.292	Microtus_ochrogaster
ENSXCOG00000004111	mrpl48	57	80.702	ENSMMOG00000020651	mrpl48	100	80.702	Mola_mola
ENSXCOG00000004111	mrpl48	90	48.718	ENSMODG00000007576	MRPL48	90	48.718	Monodelphis_domestica
ENSXCOG00000004111	mrpl48	98	70.616	ENSMALG00000008851	mrpl48	96	70.616	Monopterus_albus
ENSXCOG00000004111	mrpl48	89	50.562	ENSMUSG00000030706	Mrpl48	100	59.322	Mus_musculus
ENSXCOG00000004111	mrpl48	89	51.124	MGP_PahariEiJ_G0013272	Mrpl48	90	47.938	Mus_pahari
ENSXCOG00000004111	mrpl48	89	51.685	MGP_SPRETEiJ_G0031161	Mrpl48	90	48.969	Mus_spretus
ENSXCOG00000004111	mrpl48	90	45.918	ENSMPUG00000019110	-	90	45.918	Mustela_putorius_furo
ENSXCOG00000004111	mrpl48	89	52.514	ENSMLUG00000012083	MRPL48	90	49.485	Myotis_lucifugus
ENSXCOG00000004111	mrpl48	90	47.692	ENSNGAG00000006402	Mrpl48	90	47.692	Nannospalax_galili
ENSXCOG00000004111	mrpl48	67	71.942	ENSNBRG00000011494	mrpl48	72	71.942	Neolamprologus_brichardi
ENSXCOG00000004111	mrpl48	96	49.479	ENSNLEG00000017097	MRPL48	89	49.479	Nomascus_leucogenys
ENSXCOG00000004111	mrpl48	88	42.286	ENSNLEG00000028993	-	89	39.487	Nomascus_leucogenys
ENSXCOG00000004111	mrpl48	85	56.140	ENSOPRG00000010373	MRPL48	98	51.323	Ochotona_princeps
ENSXCOG00000004111	mrpl48	83	54.491	ENSODEG00000005929	MRPL48	100	61.062	Octodon_degus
ENSXCOG00000004111	mrpl48	98	76.887	ENSONIG00000012529	mrpl48	98	76.887	Oreochromis_niloticus
ENSXCOG00000004111	mrpl48	88	54.237	ENSOANG00000013906	-	84	54.237	Ornithorhynchus_anatinus
ENSXCOG00000004111	mrpl48	90	49.744	ENSOCUG00000025915	-	90	49.744	Oryctolagus_cuniculus
ENSXCOG00000004111	mrpl48	90	51.934	ENSOCUG00000009302	-	91	51.934	Oryctolagus_cuniculus
ENSXCOG00000004111	mrpl48	85	75.882	ENSORLG00000008682	mrpl48	96	67.662	Oryzias_latipes
ENSXCOG00000004111	mrpl48	85	75.882	ENSORLG00020004801	MRPL48	96	67.662	Oryzias_latipes_hni
ENSXCOG00000004111	mrpl48	85	75.294	ENSORLG00015021506	mrpl48	96	67.164	Oryzias_latipes_hsok
ENSXCOG00000004111	mrpl48	95	72.589	ENSOMEG00000019182	mrpl48	98	73.096	Oryzias_melastigma
ENSXCOG00000004111	mrpl48	72	54.861	ENSOGAG00000004771	-	99	54.861	Otolemur_garnettii
ENSXCOG00000004111	mrpl48	90	48.718	ENSOGAG00000027978	-	90	48.718	Otolemur_garnettii
ENSXCOG00000004111	mrpl48	89	50.838	ENSOARG00000008118	MRPL48	90	48.718	Ovis_aries
ENSXCOG00000004111	mrpl48	90	47.179	ENSPPAG00000039192	MRPL48	90	47.179	Pan_paniscus
ENSXCOG00000004111	mrpl48	96	46.667	ENSPPRG00000008470	MRPL48	100	58.407	Panthera_pardus
ENSXCOG00000004111	mrpl48	96	46.190	ENSPTIG00000020025	MRPL48	100	58.407	Panthera_tigris_altaica
ENSXCOG00000004111	mrpl48	90	47.179	ENSPTRG00000004049	MRPL48	92	47.179	Pan_troglodytes
ENSXCOG00000004111	mrpl48	88	51.136	ENSPANG00000019128	MRPL48	90	47.692	Papio_anubis
ENSXCOG00000004111	mrpl48	88	45.143	ENSPANG00000030690	-	92	42.564	Papio_anubis
ENSXCOG00000004111	mrpl48	57	58.407	ENSPKIG00000024210	mrpl48	99	58.407	Paramormyrops_kingsleyae
ENSXCOG00000004111	mrpl48	97	50.000	ENSPSIG00000014248	MRPL48	98	50.000	Pelodiscus_sinensis
ENSXCOG00000004111	mrpl48	69	60.390	ENSPMGG00000004557	mrpl48	97	60.390	Periophthalmus_magnuspinnatus
ENSXCOG00000004111	mrpl48	57	57.522	ENSPEMG00000021769	Mrpl48	100	57.522	Peromyscus_maniculatus_bairdii
ENSXCOG00000004111	mrpl48	83	53.892	ENSPCIG00000021813	MRPL48	64	53.892	Phascolarctos_cinereus
ENSXCOG00000004111	mrpl48	98	89.151	ENSPFOG00000014883	mrpl48	98	89.151	Poecilia_formosa
ENSXCOG00000004111	mrpl48	100	91.960	ENSPLAG00000004162	mrpl48	100	91.960	Poecilia_latipinna
ENSXCOG00000004111	mrpl48	98	90.431	ENSPMEG00000015944	mrpl48	98	90.431	Poecilia_mexicana
ENSXCOG00000004111	mrpl48	97	91.795	ENSPREG00000020427	mrpl48	93	91.795	Poecilia_reticulata
ENSXCOG00000004111	mrpl48	96	48.187	ENSPPYG00000003664	-	74	48.187	Pongo_abelii
ENSXCOG00000004111	mrpl48	96	50.000	ENSPCOG00000020385	-	90	50.000	Propithecus_coquereli
ENSXCOG00000004111	mrpl48	90	47.692	ENSPCOG00000025047	-	90	47.692	Propithecus_coquereli
ENSXCOG00000004111	mrpl48	89	44.693	ENSPVAG00000006653	MRPL48	94	45.251	Pteropus_vampyrus
ENSXCOG00000004111	mrpl48	98	74.528	ENSPNYG00000020778	mrpl48	98	74.528	Pundamilia_nyererei
ENSXCOG00000004111	mrpl48	91	64.481	ENSPNAG00000027512	mrpl48	88	58.333	Pygocentrus_nattereri
ENSXCOG00000004111	mrpl48	89	50.000	ENSRNOG00000018042	Mrpl48	86	48.649	Rattus_norvegicus
ENSXCOG00000004111	mrpl48	99	43.137	ENSRBIG00000030623	-	100	43.137	Rhinopithecus_bieti
ENSXCOG00000004111	mrpl48	96	49.479	ENSRROG00000043160	MRPL48	89	49.479	Rhinopithecus_roxellana
ENSXCOG00000004111	mrpl48	99	42.647	ENSRROG00000040924	-	100	42.647	Rhinopithecus_roxellana
ENSXCOG00000004111	mrpl48	52	50.962	ENSSBOG00000028791	-	100	50.962	Saimiri_boliviensis_boliviensis
ENSXCOG00000004111	mrpl48	83	55.090	ENSSHAG00000014091	MRPL48	95	55.090	Sarcophilus_harrisii
ENSXCOG00000004111	mrpl48	98	51.163	ENSSFOG00015002052	mrpl48	98	51.163	Scleropages_formosus
ENSXCOG00000004111	mrpl48	97	63.333	ENSSMAG00000015781	mrpl48	99	62.963	Scophthalmus_maximus
ENSXCOG00000004111	mrpl48	98	66.509	ENSSDUG00000014937	mrpl48	98	66.509	Seriola_dumerili
ENSXCOG00000004111	mrpl48	98	66.509	ENSSLDG00000008081	mrpl48	98	66.509	Seriola_lalandi_dorsalis
ENSXCOG00000004111	mrpl48	84	53.254	ENSSARG00000003792	MRPL48	66	53.254	Sorex_araneus
ENSXCOG00000004111	mrpl48	83	58.434	ENSSPUG00000017310	MRPL48	78	58.434	Sphenodon_punctatus
ENSXCOG00000004111	mrpl48	97	71.429	ENSSPAG00000012763	mrpl48	97	71.429	Stegastes_partitus
ENSXCOG00000004111	mrpl48	97	51.031	ENSSSCG00000014829	MRPL48	92	51.031	Sus_scrofa
ENSXCOG00000004111	mrpl48	83	49.701	ENSTGUG00000013469	-	96	49.701	Taeniopygia_guttata
ENSXCOG00000004111	mrpl48	98	66.190	ENSTRUG00000005273	mrpl48	99	67.805	Takifugu_rubripes
ENSXCOG00000004111	mrpl48	89	74.576	ENSTNIG00000007416	mrpl48	90	71.958	Tetraodon_nigroviridis
ENSXCOG00000004111	mrpl48	89	51.397	ENSTTRG00000005403	MRPL48	96	49.468	Tursiops_truncatus
ENSXCOG00000004111	mrpl48	97	48.454	ENSUMAG00000010317	MRPL48	92	48.454	Ursus_maritimus
ENSXCOG00000004111	mrpl48	89	51.397	ENSVPAG00000004657	MRPL48	94	51.397	Vicugna_pacos
ENSXCOG00000004111	mrpl48	74	43.750	ENSVVUG00000024543	-	100	58.407	Vulpes_vulpes
ENSXCOG00000004111	mrpl48	87	54.749	ENSXETG00000023199	mrpl48	93	51.531	Xenopus_tropicalis
ENSXCOG00000004111	mrpl48	98	95.714	ENSXMAG00000011518	mrpl48	98	95.714	Xiphophorus_maculatus