EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000004160 (Gene tree)
Gene ID: -
Gene Symbol: sar1b
Alias: sara2|zgc:73204
Full Name: secretion associated%2C Ras related GTPase 1B
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 3980 bases
Position: chrKQ557203.1:1438500-1442479
Accession: ZDB-GENE-040426-1958
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000005311	MMR_HSR1	PF01926.23	3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000005372	-	615	-	ENSXCOP00000005311	204 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000004160's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000004160's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000004160	sar1b	82	31.138	ENSXCOG00000006377	arl2	84	31.138
ENSXCOG00000004160	sar1b	65	30.070	ENSXCOG00000009364	arfrp1	72	30.070
ENSXCOG00000004160	sar1b	64	32.353	ENSXCOG00000016119	arl4cb	68	32.353
ENSXCOG00000004160	sar1b	65	30.827	ENSXCOG00000001487	-	88	30.827
ENSXCOG00000004160	sar1b	83	32.386	ENSXCOG00000003892	arl4d	82	32.386
ENSXCOG00000004160	sar1b	58	35.200	ENSXCOG00000003923	-	62	35.200
ENSXCOG00000004160	sar1b	68	32.867	ENSXCOG00000007236	arl4aa	72	32.867

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000004160	sar1b	87	83.708	ENSAPOG00000017891	-	90	83.708	Acanthochromis_polyacanthus
ENSXCOG00000004160	sar1b	87	95.506	ENSAPOG00000007186	sar1b	90	95.506	Acanthochromis_polyacanthus
ENSXCOG00000004160	sar1b	87	93.258	ENSACIG00000013634	sar1b	90	93.258	Amphilophus_citrinellus
ENSXCOG00000004160	sar1b	96	77.665	ENSACIG00000024513	-	99	77.665	Amphilophus_citrinellus
ENSXCOG00000004160	sar1b	87	83.708	ENSAOCG00000002627	-	90	83.708	Amphiprion_ocellaris
ENSXCOG00000004160	sar1b	87	95.506	ENSAOCG00000005888	sar1b	90	95.506	Amphiprion_ocellaris
ENSXCOG00000004160	sar1b	87	83.708	ENSAPEG00000019680	-	90	83.708	Amphiprion_percula
ENSXCOG00000004160	sar1b	87	95.506	ENSAPEG00000022771	sar1b	90	95.506	Amphiprion_percula
ENSXCOG00000004160	sar1b	87	82.022	ENSATEG00000023368	-	90	82.022	Anabas_testudineus
ENSXCOG00000004160	sar1b	87	94.382	ENSATEG00000012904	sar1b	90	94.382	Anabas_testudineus
ENSXCOG00000004160	sar1b	87	91.573	ENSACAG00000001470	-	90	91.573	Anolis_carolinensis
ENSXCOG00000004160	sar1b	87	83.708	ENSACLG00000005011	-	90	83.708	Astatotilapia_calliptera
ENSXCOG00000004160	sar1b	87	95.506	ENSACLG00000014649	sar1b	90	95.506	Astatotilapia_calliptera
ENSXCOG00000004160	sar1b	87	86.517	ENSAMXG00000034192	-	82	86.517	Astyanax_mexicanus
ENSXCOG00000004160	sar1b	87	91.011	ENSCSEG00000015238	sar1b	88	91.011	Cynoglossus_semilaevis
ENSXCOG00000004160	sar1b	87	84.270	ENSCSEG00000016976	-	90	84.270	Cynoglossus_semilaevis
ENSXCOG00000004160	sar1b	87	96.629	ENSCVAG00000022959	sar1b	90	96.629	Cyprinodon_variegatus
ENSXCOG00000004160	sar1b	87	93.258	ENSDARG00000103403	sar1b	90	93.258	Danio_rerio
ENSXCOG00000004160	sar1b	87	73.034	FBgn0038947	Sar1	92	73.034	Drosophila_melanogaster
ENSXCOG00000004160	sar1b	87	89.326	ENSEBUG00000011723	sar1b	90	89.326	Eptatretus_burgeri
ENSXCOG00000004160	sar1b	87	94.382	ENSELUG00000020912	sar1b	90	94.382	Esox_lucius
ENSXCOG00000004160	sar1b	87	95.506	ENSFHEG00000019865	sar1b	90	95.506	Fundulus_heteroclitus
ENSXCOG00000004160	sar1b	87	95.506	ENSGMOG00000008023	sar1b	90	95.506	Gadus_morhua
ENSXCOG00000004160	sar1b	87	100.000	ENSGAFG00000007081	sar1b	90	100.000	Gambusia_affinis
ENSXCOG00000004160	sar1b	87	93.258	ENSGACG00000001474	sar1b	90	93.258	Gasterosteus_aculeatus
ENSXCOG00000004160	sar1b	87	95.506	ENSHBUG00000000915	sar1b	90	95.506	Haplochromis_burtoni
ENSXCOG00000004160	sar1b	87	83.708	ENSHBUG00000018397	-	90	83.708	Haplochromis_burtoni
ENSXCOG00000004160	sar1b	87	93.258	ENSHCOG00000010953	sar1b	90	93.258	Hippocampus_comes
ENSXCOG00000004160	sar1b	87	87.640	ENSIPUG00000010046	sar1b	90	87.640	Ictalurus_punctatus
ENSXCOG00000004160	sar1b	87	92.135	ENSIPUG00000020925	sar1b	90	92.135	Ictalurus_punctatus
ENSXCOG00000004160	sar1b	87	84.831	ENSKMAG00000014875	-	90	84.831	Kryptolebias_marmoratus
ENSXCOG00000004160	sar1b	87	93.258	ENSKMAG00000019693	sar1b	90	93.258	Kryptolebias_marmoratus
ENSXCOG00000004160	sar1b	87	93.820	ENSLBEG00000027550	sar1b	90	93.820	Labrus_bergylta
ENSXCOG00000004160	sar1b	87	84.270	ENSLBEG00000016945	-	90	84.270	Labrus_bergylta
ENSXCOG00000004160	sar1b	87	78.212	ENSLACG00000017029	-	90	78.212	Latimeria_chalumnae
ENSXCOG00000004160	sar1b	87	88.202	ENSLACG00000010795	sar1b	90	88.202	Latimeria_chalumnae
ENSXCOG00000004160	sar1b	87	89.888	ENSLOCG00000005214	-	90	89.888	Lepisosteus_oculatus
ENSXCOG00000004160	sar1b	87	94.382	ENSLOCG00000010197	sar1b	90	94.382	Lepisosteus_oculatus
ENSXCOG00000004160	sar1b	87	94.944	ENSMAMG00000021732	sar1b	90	94.944	Mastacembelus_armatus
ENSXCOG00000004160	sar1b	87	83.708	ENSMZEG00005001012	-	90	83.708	Maylandia_zebra
ENSXCOG00000004160	sar1b	87	95.506	ENSMZEG00005008942	sar1b	90	95.506	Maylandia_zebra
ENSXCOG00000004160	sar1b	87	91.011	ENSMGAG00000005387	-	91	91.011	Meleagris_gallopavo
ENSXCOG00000004160	sar1b	87	83.146	ENSMMOG00000013803	-	90	83.146	Mola_mola
ENSXCOG00000004160	sar1b	90	93.443	ENSMALG00000016635	sar1b	96	93.443	Monopterus_albus
ENSXCOG00000004160	sar1b	87	83.708	ENSNBRG00000014004	-	90	83.708	Neolamprologus_brichardi
ENSXCOG00000004160	sar1b	87	94.944	ENSNBRG00000008013	sar1b	90	94.944	Neolamprologus_brichardi
ENSXCOG00000004160	sar1b	87	93.820	ENSONIG00000017278	sar1b	90	93.820	Oreochromis_niloticus
ENSXCOG00000004160	sar1b	87	90.449	ENSORLG00000000932	sar1b	90	90.449	Oryzias_latipes
ENSXCOG00000004160	sar1b	87	90.449	ENSORLG00020021985	sar1b	90	90.449	Oryzias_latipes_hni
ENSXCOG00000004160	sar1b	87	90.449	ENSORLG00015007044	sar1b	90	90.449	Oryzias_latipes_hsok
ENSXCOG00000004160	sar1b	87	91.573	ENSOMEG00000001052	sar1b	90	91.573	Oryzias_melastigma
ENSXCOG00000004160	sar1b	87	93.820	ENSPKIG00000010688	sar1b	90	93.820	Paramormyrops_kingsleyae
ENSXCOG00000004160	sar1b	87	93.258	ENSPKIG00000017353	-	90	93.258	Paramormyrops_kingsleyae
ENSXCOG00000004160	sar1b	87	83.425	ENSPMAG00000003593	sar1b	90	83.425	Petromyzon_marinus
ENSXCOG00000004160	sar1b	87	99.438	ENSPFOG00000005666	sar1b	90	99.438	Poecilia_formosa
ENSXCOG00000004160	sar1b	87	98.315	ENSPLAG00000012223	sar1b	90	98.315	Poecilia_latipinna
ENSXCOG00000004160	sar1b	56	75.862	ENSPLAG00000001016	-	75	75.862	Poecilia_latipinna
ENSXCOG00000004160	sar1b	87	99.438	ENSPMEG00000016831	sar1b	90	99.438	Poecilia_mexicana
ENSXCOG00000004160	sar1b	87	99.438	ENSPREG00000005312	sar1b	81	99.438	Poecilia_reticulata
ENSXCOG00000004160	sar1b	56	75.214	ENSPREG00000002020	-	87	75.214	Poecilia_reticulata
ENSXCOG00000004160	sar1b	87	83.708	ENSPNYG00000021357	-	90	83.708	Pundamilia_nyererei
ENSXCOG00000004160	sar1b	87	95.506	ENSPNYG00000012440	sar1b	90	95.506	Pundamilia_nyererei
ENSXCOG00000004160	sar1b	87	93.820	ENSPNAG00000014683	sar1b	90	93.820	Pygocentrus_nattereri
ENSXCOG00000004160	sar1b	87	87.079	ENSPNAG00000001123	-	90	87.079	Pygocentrus_nattereri
ENSXCOG00000004160	sar1b	87	92.135	ENSSFOG00015018128	-	90	92.135	Scleropages_formosus
ENSXCOG00000004160	sar1b	87	94.382	ENSSFOG00015020051	sar1b	90	94.382	Scleropages_formosus
ENSXCOG00000004160	sar1b	87	84.270	ENSSMAG00000002165	-	90	84.270	Scophthalmus_maximus
ENSXCOG00000004160	sar1b	87	93.820	ENSSMAG00000007106	sar1b	72	93.820	Scophthalmus_maximus
ENSXCOG00000004160	sar1b	87	83.146	ENSSDUG00000019629	-	90	83.146	Seriola_dumerili
ENSXCOG00000004160	sar1b	87	93.820	ENSSDUG00000020926	sar1b	90	93.820	Seriola_dumerili
ENSXCOG00000004160	sar1b	87	83.146	ENSSLDG00000024197	-	90	83.146	Seriola_lalandi_dorsalis
ENSXCOG00000004160	sar1b	87	93.820	ENSSLDG00000017052	sar1b	90	93.820	Seriola_lalandi_dorsalis
ENSXCOG00000004160	sar1b	87	91.011	ENSSPUG00000010247	-	90	91.011	Sphenodon_punctatus
ENSXCOG00000004160	sar1b	87	94.944	ENSSPAG00000017634	sar1b	90	94.944	Stegastes_partitus
ENSXCOG00000004160	sar1b	87	83.146	ENSSPAG00000015626	-	90	83.146	Stegastes_partitus
ENSXCOG00000004160	sar1b	87	90.449	ENSTRUG00000023908	sar1b	90	90.449	Takifugu_rubripes
ENSXCOG00000004160	sar1b	87	92.697	ENSTNIG00000016097	sar1b	90	92.697	Tetraodon_nigroviridis
ENSXCOG00000004160	sar1b	87	100.000	ENSXMAG00000008294	sar1b	90	100.000	Xiphophorus_maculatus