EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000004226 (Gene tree)
Gene ID: -
Gene Symbol: rab11al
Alias: fc54g10|wu:fc54g10|zgc:63565
Full Name: RAB11a%2C member RAS oncogene family%2C like
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 10700 bases
Position: chrKQ557218.1:1935641-1946340
Accession: ZDB-GENE-031118-188
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000005403	MMR_HSR1	PF01926.23	3.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000005465	-	651	-	ENSXCOP00000005403	216 (aa)	-	UPI000293AA44

Gene Model

Click here to download ENSXCOG00000004226's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000004226's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000004226	rab11al	73	40.491	ENSXCOG00000013344	rab33a	58	40.491
ENSXCOG00000004226	rab11al	99	33.945	ENSXCOG00000019054	rab9a	93	33.945
ENSXCOG00000004226	rab11al	73	48.408	ENSXCOG00000006300	-	89	41.089
ENSXCOG00000004226	rab11al	64	45.000	ENSXCOG00000003192	-	65	45.000
ENSXCOG00000004226	rab11al	82	51.685	ENSXCOG00000010770	-	71	51.685
ENSXCOG00000004226	rab11al	79	38.728	ENSXCOG00000018683	zgc:101559	74	38.728
ENSXCOG00000004226	rab11al	93	32.673	ENSXCOG00000006259	rab6a	93	32.673
ENSXCOG00000004226	rab11al	98	62.264	ENSXCOG00000020125	rab25a	89	77.099
ENSXCOG00000004226	rab11al	75	36.025	ENSXCOG00000015802	RAB41	76	36.025
ENSXCOG00000004226	rab11al	73	42.675	ENSXCOG00000016452	rab22a	81	42.675
ENSXCOG00000004226	rab11al	69	34.000	ENSXCOG00000020508	kras	85	35.185
ENSXCOG00000004226	rab11al	73	39.877	ENSXCOG00000019921	rab7a	78	39.877
ENSXCOG00000004226	rab11al	95	33.023	ENSXCOG00000016370	RAB29	99	33.023
ENSXCOG00000004226	rab11al	98	43.056	ENSXCOG00000010695	zgc:171927	99	44.076
ENSXCOG00000004226	rab11al	96	47.143	ENSXCOG00000013842	rab1ab	99	47.143
ENSXCOG00000004226	rab11al	78	46.429	ENSXCOG00000019533	rab13	90	46.429
ENSXCOG00000004226	rab11al	99	84.651	ENSXCOG00000001357	rab11a	82	84.651
ENSXCOG00000004226	rab11al	69	35.333	ENSXCOG00000020608	hrasb	85	36.420
ENSXCOG00000004226	rab11al	82	70.056	ENSXCOG00000004227	rab25b	98	60.280
ENSXCOG00000004226	rab11al	66	32.639	ENSXCOG00000019281	rheb	79	32.639
ENSXCOG00000004226	rab11al	86	34.392	ENSXCOG00000002232	rab6bb	91	34.392
ENSXCOG00000004226	rab11al	91	44.828	ENSXCOG00000006807	rab39bb	94	44.828
ENSXCOG00000004226	rab11al	73	48.408	ENSXCOG00000020121	rab5aa	73	48.408
ENSXCOG00000004226	rab11al	53	30.252	ENSXCOG00000016119	arl4cb	58	30.252
ENSXCOG00000004226	rab11al	87	31.937	ENSXCOG00000011864	rab23	88	32.381
ENSXCOG00000004226	rab11al	95	37.619	ENSXCOG00000019310	rab12	83	37.619
ENSXCOG00000004226	rab11al	75	40.719	ENSXCOG00000012032	-	73	40.719
ENSXCOG00000004226	rab11al	99	81.193	ENSXCOG00000008042	-	99	81.193
ENSXCOG00000004226	rab11al	94	35.885	ENSXCOG00000009094	rab9b	97	35.885
ENSXCOG00000004226	rab11al	94	31.797	ENSXCOG00000009541	rab34a	80	31.797
ENSXCOG00000004226	rab11al	84	41.530	ENSXCOG00000003428	rab42a	84	41.530
ENSXCOG00000004226	rab11al	73	38.596	ENSXCOG00000000469	rab33ba	72	38.596
ENSXCOG00000004226	rab11al	99	80.556	ENSXCOG00000009190	-	99	80.556
ENSXCOG00000004226	rab11al	62	92.481	ENSXCOG00000009194	-	98	92.481
ENSXCOG00000004226	rab11al	95	33.486	ENSXCOG00000008410	si:dkey-34d22.5	97	33.486
ENSXCOG00000004226	rab11al	84	31.383	ENSXCOG00000007650	rras	95	31.383
ENSXCOG00000004226	rab11al	75	40.120	ENSXCOG00000020575	RAB9A	75	40.120
ENSXCOG00000004226	rab11al	73	48.408	ENSXCOG00000016788	rab5c	73	48.408
ENSXCOG00000004226	rab11al	74	30.909	ENSXCOG00000010812	dnajc27	60	30.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000004226	rab11al	100	93.056	ENSAPOG00000008251	rab11al	100	93.056	Acanthochromis_polyacanthus
ENSXCOG00000004226	rab11al	100	93.056	ENSACIG00000017403	rab11al	100	93.056	Amphilophus_citrinellus
ENSXCOG00000004226	rab11al	100	92.593	ENSAOCG00000015678	rab11al	100	92.593	Amphiprion_ocellaris
ENSXCOG00000004226	rab11al	100	92.593	ENSAPEG00000022135	rab11al	100	92.593	Amphiprion_percula
ENSXCOG00000004226	rab11al	100	91.667	ENSATEG00000006156	rab11al	100	91.667	Anabas_testudineus
ENSXCOG00000004226	rab11al	100	93.056	ENSACLG00000010268	rab11al	100	93.056	Astatotilapia_calliptera
ENSXCOG00000004226	rab11al	94	85.714	ENSAMXG00000024632	rab11al	93	85.714	Astyanax_mexicanus
ENSXCOG00000004226	rab11al	94	81.188	ENSCPBG00000025819	-	99	81.188	Chrysemys_picta_bellii
ENSXCOG00000004226	rab11al	100	93.519	ENSCSEG00000011996	rab11al	100	93.519	Cynoglossus_semilaevis
ENSXCOG00000004226	rab11al	100	97.685	ENSCVAG00000020016	rab11al	100	97.685	Cyprinodon_variegatus
ENSXCOG00000004226	rab11al	100	89.352	ENSDARG00000014340	rab11al	100	89.352	Danio_rerio
ENSXCOG00000004226	rab11al	100	90.741	ENSELUG00000012035	rab11al	100	90.741	Esox_lucius
ENSXCOG00000004226	rab11al	99	81.395	ENSFALG00000002594	-	91	81.395	Ficedula_albicollis
ENSXCOG00000004226	rab11al	96	97.596	ENSFHEG00000000832	rab11al	99	97.596	Fundulus_heteroclitus
ENSXCOG00000004226	rab11al	94	87.129	ENSGMOG00000006450	rab11al	100	87.129	Gadus_morhua
ENSXCOG00000004226	rab11al	99	79.535	ENSGALG00000037802	-	50	79.535	Gallus_gallus
ENSXCOG00000004226	rab11al	100	99.074	ENSGAFG00000021725	rab11al	100	99.074	Gambusia_affinis
ENSXCOG00000004226	rab11al	100	91.667	ENSGACG00000013259	rab11al	100	91.667	Gasterosteus_aculeatus
ENSXCOG00000004226	rab11al	99	81.860	ENSGAGG00000020702	-	99	81.860	Gopherus_agassizii
ENSXCOG00000004226	rab11al	100	93.056	ENSHBUG00000009333	rab11al	100	93.056	Haplochromis_burtoni
ENSXCOG00000004226	rab11al	100	93.056	ENSHCOG00000000232	rab11al	100	93.056	Hippocampus_comes
ENSXCOG00000004226	rab11al	100	91.204	ENSIPUG00000006091	RAB11A	100	91.204	Ictalurus_punctatus
ENSXCOG00000004226	rab11al	100	88.889	ENSKMAG00000015516	rab11al	100	88.889	Kryptolebias_marmoratus
ENSXCOG00000004226	rab11al	100	92.130	ENSLBEG00000016417	rab11al	100	92.130	Labrus_bergylta
ENSXCOG00000004226	rab11al	99	80.000	ENSLACG00000011380	rab11al	99	80.000	Latimeria_chalumnae
ENSXCOG00000004226	rab11al	100	89.815	ENSLOCG00000008865	rab11al	100	89.815	Lepisosteus_oculatus
ENSXCOG00000004226	rab11al	100	93.981	ENSMAMG00000010278	rab11al	100	93.981	Mastacembelus_armatus
ENSXCOG00000004226	rab11al	100	93.056	ENSMZEG00005017514	rab11al	100	93.056	Maylandia_zebra
ENSXCOG00000004226	rab11al	75	90.062	ENSMGAG00000004720	-	95	90.062	Meleagris_gallopavo
ENSXCOG00000004226	rab11al	79	95.906	ENSMMOG00000017117	rab11al	84	95.906	Mola_mola
ENSXCOG00000004226	rab11al	100	92.593	ENSMALG00000004093	rab11al	100	92.593	Monopterus_albus
ENSXCOG00000004226	rab11al	100	93.056	ENSNBRG00000005116	rab11al	100	93.056	Neolamprologus_brichardi
ENSXCOG00000004226	rab11al	100	93.519	ENSONIG00000002281	rab11al	100	93.519	Oreochromis_niloticus
ENSXCOG00000004226	rab11al	100	93.519	ENSORLG00000016126	rab11al	100	93.519	Oryzias_latipes
ENSXCOG00000004226	rab11al	100	93.519	ENSORLG00020013747	rab11al	100	93.519	Oryzias_latipes_hni
ENSXCOG00000004226	rab11al	100	93.519	ENSORLG00015019591	rab11al	100	93.519	Oryzias_latipes_hsok
ENSXCOG00000004226	rab11al	100	92.130	ENSOMEG00000020271	rab11al	100	92.130	Oryzias_melastigma
ENSXCOG00000004226	rab11al	100	88.426	ENSPKIG00000020893	rab11al	100	88.426	Paramormyrops_kingsleyae
ENSXCOG00000004226	rab11al	99	80.465	ENSPSIG00000013143	-	99	80.465	Pelodiscus_sinensis
ENSXCOG00000004226	rab11al	100	88.426	ENSPMGG00000004220	rab11al	100	88.426	Periophthalmus_magnuspinnatus
ENSXCOG00000004226	rab11al	100	99.074	ENSPFOG00000011316	rab11al	100	99.074	Poecilia_formosa
ENSXCOG00000004226	rab11al	100	99.074	ENSPLAG00000007986	rab11al	100	99.074	Poecilia_latipinna
ENSXCOG00000004226	rab11al	100	99.074	ENSPMEG00000000804	rab11al	100	99.074	Poecilia_mexicana
ENSXCOG00000004226	rab11al	100	98.611	ENSPREG00000017324	rab11al	100	98.611	Poecilia_reticulata
ENSXCOG00000004226	rab11al	100	93.056	ENSPNYG00000018244	rab11al	100	93.056	Pundamilia_nyererei
ENSXCOG00000004226	rab11al	100	90.278	ENSPNAG00000029085	rab11al	100	90.278	Pygocentrus_nattereri
ENSXCOG00000004226	rab11al	100	90.278	ENSSFOG00015008618	rab11al	100	90.278	Scleropages_formosus
ENSXCOG00000004226	rab11al	100	91.667	ENSSMAG00000016206	rab11al	100	91.667	Scophthalmus_maximus
ENSXCOG00000004226	rab11al	100	92.593	ENSSDUG00000006278	rab11al	100	92.593	Seriola_dumerili
ENSXCOG00000004226	rab11al	100	92.593	ENSSLDG00000012116	rab11al	100	92.593	Seriola_lalandi_dorsalis
ENSXCOG00000004226	rab11al	99	78.241	ENSSPUG00000002526	-	99	78.241	Sphenodon_punctatus
ENSXCOG00000004226	rab11al	100	92.130	ENSSPAG00000012044	rab11al	100	92.130	Stegastes_partitus
ENSXCOG00000004226	rab11al	94	84.653	ENSTGUG00000003680	-	99	84.653	Taeniopygia_guttata
ENSXCOG00000004226	rab11al	99	91.549	ENSTRUG00000007556	rab11al	99	91.549	Takifugu_rubripes
ENSXCOG00000004226	rab11al	100	100.000	ENSXMAG00000027071	rab11al	100	100.000	Xiphophorus_maculatus