EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000004435 (Gene tree)
Gene ID: -
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: La ribonucleoprotein domain family%2C member 1B
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 34441 bases
Position: chrKQ557211.1:22811349-22845789
Accession: ZDB-GENE-030131-4154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000005705	La	PF05383.17	1.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000005771	-	2715	-	ENSXCOP00000005705	904 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000004435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000004435's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000004435	larp1b	99	48.542	ENSXCOG00000004022	larp1	75	58.631

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000004435	larp1b	68	59.314	ENSG00000138709	LARP1B	73	58.963	Homo_sapiens
ENSXCOG00000004435	larp1b	95	74.811	ENSAPOG00000020101	larp1b	88	73.048	Acanthochromis_polyacanthus
ENSXCOG00000004435	larp1b	96	72.236	ENSACIG00000023890	larp1b	90	73.149	Amphilophus_citrinellus
ENSXCOG00000004435	larp1b	84	71.512	ENSAOCG00000014268	larp1b	89	72.359	Amphiprion_ocellaris
ENSXCOG00000004435	larp1b	95	74.685	ENSAPEG00000004126	larp1b	90	72.082	Amphiprion_percula
ENSXCOG00000004435	larp1b	98	71.814	ENSATEG00000017849	larp1b	89	71.446	Anabas_testudineus
ENSXCOG00000004435	larp1b	74	55.333	ENSAPLG00000010129	LARP1B	83	54.437	Anas_platyrhynchos
ENSXCOG00000004435	larp1b	71	57.322	ENSACAG00000011338	LARP1B	73	57.263	Anolis_carolinensis
ENSXCOG00000004435	larp1b	55	52.661	ENSANAG00000034618	LARP1B	65	52.661	Aotus_nancymaae
ENSXCOG00000004435	larp1b	99	73.359	ENSACLG00000011948	larp1b	86	73.990	Astatotilapia_calliptera
ENSXCOG00000004435	larp1b	73	57.698	ENSAMXG00000006805	larp1b	62	64.179	Astyanax_mexicanus
ENSXCOG00000004435	larp1b	73	59.605	ENSBTAG00000012135	LARP1B	64	61.782	Bos_taurus
ENSXCOG00000004435	larp1b	76	55.995	ENSCJAG00000003338	LARP1B	73	61.066	Callithrix_jacchus
ENSXCOG00000004435	larp1b	73	59.801	ENSCAFG00000003831	LARP1B	75	63.492	Canis_familiaris
ENSXCOG00000004435	larp1b	73	59.915	ENSCAFG00020018899	LARP1B	72	61.976	Canis_lupus_dingo
ENSXCOG00000004435	larp1b	73	58.391	ENSCHIG00000023144	LARP1B	72	60.444	Capra_hircus
ENSXCOG00000004435	larp1b	71	57.857	ENSCCAG00000021948	LARP1B	73	59.145	Cebus_capucinus
ENSXCOG00000004435	larp1b	68	58.358	ENSCATG00000013541	LARP1B	73	58.012	Cercocebus_atys
ENSXCOG00000004435	larp1b	68	59.762	ENSCSAG00000003582	LARP1B	73	59.407	Chlorocebus_sabaeus
ENSXCOG00000004435	larp1b	68	56.083	ENSCHOG00000005354	LARP1B	72	55.752	Choloepus_hoffmanni
ENSXCOG00000004435	larp1b	76	57.520	ENSCPBG00000017480	LARP1B	72	56.992	Chrysemys_picta_bellii
ENSXCOG00000004435	larp1b	68	59.403	ENSCANG00000026958	LARP1B	75	59.050	Colobus_angolensis_palliatus
ENSXCOG00000004435	larp1b	94	71.013	ENSCSEG00000013519	larp1b	82	71.519	Cynoglossus_semilaevis
ENSXCOG00000004435	larp1b	96	77.612	ENSCVAG00000005046	larp1b	89	76.800	Cyprinodon_variegatus
ENSXCOG00000004435	larp1b	99	60.979	ENSDARG00000061169	larp1b	84	63.841	Danio_rerio
ENSXCOG00000004435	larp1b	72	51.489	ENSETEG00000012497	LARP1B	72	52.671	Echinops_telfairi
ENSXCOG00000004435	larp1b	72	46.461	ENSEBUG00000003668	larp1b	67	49.563	Eptatretus_burgeri
ENSXCOG00000004435	larp1b	73	59.541	ENSEASG00005018106	LARP1B	76	61.237	Equus_asinus_asinus
ENSXCOG00000004435	larp1b	73	59.459	ENSECAG00000001088	LARP1B	59	61.019	Equus_caballus
ENSXCOG00000004435	larp1b	86	52.204	ENSELUG00000023774	larp1b	99	51.826	Esox_lucius
ENSXCOG00000004435	larp1b	74	55.874	ENSFALG00000008098	LARP1B	72	58.676	Ficedula_albicollis
ENSXCOG00000004435	larp1b	96	85.600	ENSFHEG00000010264	larp1b	85	85.600	Fundulus_heteroclitus
ENSXCOG00000004435	larp1b	75	75.362	ENSGMOG00000005207	larp1b	66	75.725	Gadus_morhua
ENSXCOG00000004435	larp1b	71	58.621	ENSGALG00000010207	LARP1B	63	60.736	Gallus_gallus
ENSXCOG00000004435	larp1b	100	78.197	ENSGAFG00000012012	larp1b	85	91.108	Gambusia_affinis
ENSXCOG00000004435	larp1b	88	69.391	ENSGACG00000004609	larp1b	77	69.945	Gasterosteus_aculeatus
ENSXCOG00000004435	larp1b	75	57.713	ENSGAGG00000017209	LARP1B	71	57.124	Gopherus_agassizii
ENSXCOG00000004435	larp1b	68	59.165	ENSGGOG00000015900	LARP1B	73	58.815	Gorilla_gorilla
ENSXCOG00000004435	larp1b	99	73.325	ENSHBUG00000009730	larp1b	91	73.831	Haplochromis_burtoni
ENSXCOG00000004435	larp1b	69	76.667	ENSHCOG00000000918	larp1b	92	76.560	Hippocampus_comes
ENSXCOG00000004435	larp1b	95	60.222	ENSIPUG00000012138	larp1b	85	63.061	Ictalurus_punctatus
ENSXCOG00000004435	larp1b	94	71.705	ENSKMAG00000011589	larp1b	88	72.351	Kryptolebias_marmoratus
ENSXCOG00000004435	larp1b	99	67.831	ENSLBEG00000005655	larp1b	79	76.320	Labrus_bergylta
ENSXCOG00000004435	larp1b	81	63.111	ENSLACG00000015247	LARP1B	68	64.923	Latimeria_chalumnae
ENSXCOG00000004435	larp1b	81	58.802	ENSLOCG00000010684	larp1b	78	59.750	Lepisosteus_oculatus
ENSXCOG00000004435	larp1b	68	59.851	ENSMFAG00000002218	LARP1B	73	59.496	Macaca_fascicularis
ENSXCOG00000004435	larp1b	68	59.762	ENSMMUG00000021347	LARP1B	73	59.407	Macaca_mulatta
ENSXCOG00000004435	larp1b	69	59.467	ENSMNEG00000030406	LARP1B	80	59.496	Macaca_nemestrina
ENSXCOG00000004435	larp1b	68	59.851	ENSMLEG00000009306	LARP1B	74	59.496	Mandrillus_leucophaeus
ENSXCOG00000004435	larp1b	94	73.443	ENSMAMG00000000081	larp1b	91	72.774	Mastacembelus_armatus
ENSXCOG00000004435	larp1b	81	72.821	ENSMZEG00005002545	larp1b	100	73.462	Maylandia_zebra
ENSXCOG00000004435	larp1b	65	60.842	ENSMGAG00000004809	LARP1B	71	60.345	Meleagris_gallopavo
ENSXCOG00000004435	larp1b	72	60.637	ENSMICG00000036111	LARP1B	73	62.312	Microcebus_murinus
ENSXCOG00000004435	larp1b	72	59.463	ENSMODG00000012300	LARP1B	59	61.391	Monodelphis_domestica
ENSXCOG00000004435	larp1b	95	73.678	ENSMALG00000003638	larp1b	93	71.359	Monopterus_albus
ENSXCOG00000004435	larp1b	73	59.801	ENSMPUG00000017365	LARP1B	59	61.562	Mustela_putorius_furo
ENSXCOG00000004435	larp1b	68	60.332	ENSMLUG00000010229	LARP1B	71	60.332	Myotis_lucifugus
ENSXCOG00000004435	larp1b	100	66.701	ENSNBRG00000023846	larp1b	100	66.458	Neolamprologus_brichardi
ENSXCOG00000004435	larp1b	71	57.554	ENSNLEG00000013819	LARP1B	73	58.432	Nomascus_leucogenys
ENSXCOG00000004435	larp1b	68	57.396	ENSMEUG00000010308	LARP1B	74	57.037	Notamacropus_eugenii
ENSXCOG00000004435	larp1b	79	48.673	ENSOPRG00000005478	LARP1B	73	52.774	Ochotona_princeps
ENSXCOG00000004435	larp1b	79	88.235	ENSONIG00000012386	larp1b	83	88.235	Oreochromis_niloticus
ENSXCOG00000004435	larp1b	73	57.386	ENSOCUG00000013330	LARP1B	71	59.159	Oryctolagus_cuniculus
ENSXCOG00000004435	larp1b	92	71.466	ENSORLG00000017954	larp1b	89	69.987	Oryzias_latipes
ENSXCOG00000004435	larp1b	93	71.355	ENSORLG00020013081	larp1b	84	70.240	Oryzias_latipes_hni
ENSXCOG00000004435	larp1b	95	71.122	ENSORLG00015009580	larp1b	89	70.618	Oryzias_latipes_hsok
ENSXCOG00000004435	larp1b	92	73.885	ENSOMEG00000004210	larp1b	89	72.061	Oryzias_melastigma
ENSXCOG00000004435	larp1b	67	62.754	ENSOGAG00000005771	LARP1B	72	62.754	Otolemur_garnettii
ENSXCOG00000004435	larp1b	68	59.792	ENSOARG00000015300	LARP1B	73	59.792	Ovis_aries
ENSXCOG00000004435	larp1b	68	59.375	ENSPPAG00000030439	LARP1B	73	59.024	Pan_paniscus
ENSXCOG00000004435	larp1b	68	59.314	ENSPTRG00000016437	LARP1B	73	58.963	Pan_troglodytes
ENSXCOG00000004435	larp1b	68	59.851	ENSPANG00000012488	LARP1B	73	59.496	Papio_anubis
ENSXCOG00000004435	larp1b	66	60.407	ENSPKIG00000014360	larp1b	68	60.630	Paramormyrops_kingsleyae
ENSXCOG00000004435	larp1b	74	56.933	ENSPSIG00000012885	LARP1B	80	56.325	Pelodiscus_sinensis
ENSXCOG00000004435	larp1b	73	73.715	ENSPMGG00000007207	larp1b	83	73.715	Periophthalmus_magnuspinnatus
ENSXCOG00000004435	larp1b	65	53.561	ENSPMAG00000002700	larp1b	73	52.851	Petromyzon_marinus
ENSXCOG00000004435	larp1b	73	60.168	ENSPCIG00000026516	LARP1B	88	61.689	Phascolarctos_cinereus
ENSXCOG00000004435	larp1b	96	96.800	ENSPFOG00000019519	larp1b	75	96.800	Poecilia_formosa
ENSXCOG00000004435	larp1b	54	97.600	ENSPFOG00000022837	-	76	97.600	Poecilia_formosa
ENSXCOG00000004435	larp1b	96	97.600	ENSPLAG00000007115	larp1b	75	97.600	Poecilia_latipinna
ENSXCOG00000004435	larp1b	96	95.238	ENSPMEG00000001224	larp1b	88	95.238	Poecilia_mexicana
ENSXCOG00000004435	larp1b	79	53.652	ENSPCAG00000007546	LARP1B	73	58.146	Procavia_capensis
ENSXCOG00000004435	larp1b	57	68.908	ENSPCOG00000021874	LARP1B	69	66.667	Propithecus_coquereli
ENSXCOG00000004435	larp1b	71	56.313	ENSPVAG00000005373	LARP1B	72	57.576	Pteropus_vampyrus
ENSXCOG00000004435	larp1b	81	72.096	ENSPNYG00000017357	larp1b	100	72.980	Pundamilia_nyererei
ENSXCOG00000004435	larp1b	73	63.150	ENSPNAG00000008823	larp1b	63	69.172	Pygocentrus_nattereri
ENSXCOG00000004435	larp1b	68	59.851	ENSRROG00000030771	LARP1B	73	59.496	Rhinopithecus_roxellana
ENSXCOG00000004435	larp1b	51	49.365	ENSSHAG00000014474	LARP1B	66	54.667	Sarcophilus_harrisii
ENSXCOG00000004435	larp1b	75	72.093	ENSSMAG00000006347	larp1b	70	75.970	Scophthalmus_maximus
ENSXCOG00000004435	larp1b	98	73.333	ENSSDUG00000004182	larp1b	82	77.969	Seriola_dumerili
ENSXCOG00000004435	larp1b	86	76.737	ENSSLDG00000014613	larp1b	81	75.831	Seriola_lalandi_dorsalis
ENSXCOG00000004435	larp1b	79	54.618	ENSSPUG00000011837	LARP1B	75	59.385	Sphenodon_punctatus
ENSXCOG00000004435	larp1b	98	74.790	ENSSPAG00000017772	larp1b	90	74.790	Stegastes_partitus
ENSXCOG00000004435	larp1b	69	60.968	ENSSSCG00000034280	LARP1B	62	80.460	Sus_scrofa
ENSXCOG00000004435	larp1b	73	58.466	ENSTGUG00000002098	-	80	59.254	Taeniopygia_guttata
ENSXCOG00000004435	larp1b	87	73.983	ENSTRUG00000005612	larp1b	75	77.969	Takifugu_rubripes
ENSXCOG00000004435	larp1b	75	83.333	ENSTNIG00000012398	larp1b	80	83.333	Tetraodon_nigroviridis
ENSXCOG00000004435	larp1b	65	60.328	ENSTBEG00000004177	LARP1B	67	59.589	Tupaia_belangeri
ENSXCOG00000004435	larp1b	68	57.652	ENSTTRG00000012984	LARP1B	73	57.355	Tursiops_truncatus
ENSXCOG00000004435	larp1b	73	59.659	ENSUMAG00000007373	LARP1B	72	61.411	Ursus_maritimus
ENSXCOG00000004435	larp1b	69	53.037	ENSVPAG00000007223	LARP1B	74	53.037	Vicugna_pacos
ENSXCOG00000004435	larp1b	73	59.772	ENSVVUG00000011307	LARP1B	74	60.155	Vulpes_vulpes
ENSXCOG00000004435	larp1b	68	58.372	ENSXETG00000022512	larp1b	65	58.986	Xenopus_tropicalis
ENSXCOG00000004435	larp1b	97	96.850	ENSXMAG00000008150	larp1b	89	98.400	Xiphophorus_maculatus