EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000004451 (Gene tree)
Gene ID: -
Gene Symbol: setd1ba
Alias: im:7156157|si:dkey-237o15.4
Full Name: SET domain containing 1B%2C a
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 14204 bases
Position: chrKQ557223.1:14026068-14040271
Accession: ZDB-GENE-050309-289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000005717	RRM_1	PF00076.22	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000005783	-	5433	-	ENSXCOP00000005717	1810 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000004451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000004451's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000004451	setd1ba	99	77.574	ENSAPOG00000014731	setd1ba	55	81.354	Acanthochromis_polyacanthus
ENSXCOG00000004451	setd1ba	55	81.294	ENSACIG00000016453	setd1ba	56	80.597	Amphilophus_citrinellus
ENSXCOG00000004451	setd1ba	96	76.628	ENSAOCG00000012148	setd1ba	57	81.551	Amphiprion_ocellaris
ENSXCOG00000004451	setd1ba	99	77.086	ENSAPEG00000010762	setd1ba	56	79.903	Amphiprion_percula
ENSXCOG00000004451	setd1ba	93	77.163	ENSATEG00000021563	setd1ba	99	79.351	Anabas_testudineus
ENSXCOG00000004451	setd1ba	87	56.454	ENSAPLG00000005217	SETD1B	86	55.791	Anas_platyrhynchos
ENSXCOG00000004451	setd1ba	99	76.652	ENSACLG00000016584	setd1ba	54	81.194	Astatotilapia_calliptera
ENSXCOG00000004451	setd1ba	53	78.571	ENSCAFG00000008167	SETD1B	86	56.740	Canis_familiaris
ENSXCOG00000004451	setd1ba	53	67.246	ENSCAFG00020016619	SETD1B	83	51.567	Canis_lupus_dingo
ENSXCOG00000004451	setd1ba	55	47.258	ENSCATG00000035803	SETD1B	86	56.515	Cercocebus_atys
ENSXCOG00000004451	setd1ba	67	64.469	ENSCANG00000023445	SETD1B	75	64.727	Colobus_angolensis_palliatus
ENSXCOG00000004451	setd1ba	97	72.582	ENSCSEG00000001458	setd1ba	55	77.143	Cynoglossus_semilaevis
ENSXCOG00000004451	setd1ba	99	82.668	ENSCVAG00000022068	setd1ba	56	82.571	Cyprinodon_variegatus
ENSXCOG00000004451	setd1ba	56	62.175	ENSDARG00000060847	setd1ba	53	62.403	Danio_rerio
ENSXCOG00000004451	setd1ba	51	78.274	ENSFCAG00000013185	SETD1B	89	53.602	Felis_catus
ENSXCOG00000004451	setd1ba	50	73.789	ENSFDAG00000015120	SETD1B	78	72.626	Fukomys_damarensis
ENSXCOG00000004451	setd1ba	99	82.999	ENSFHEG00000013126	setd1ba	100	83.108	Fundulus_heteroclitus
ENSXCOG00000004451	setd1ba	50	64.483	ENSGMOG00000015906	-	50	61.006	Gadus_morhua
ENSXCOG00000004451	setd1ba	52	86.997	ENSGMOG00000009831	setd1ba	58	86.997	Gadus_morhua
ENSXCOG00000004451	setd1ba	99	90.466	ENSGAFG00000008712	setd1ba	99	90.466	Gambusia_affinis
ENSXCOG00000004451	setd1ba	60	50.040	ENSGAGG00000025013	SETD1B	88	54.930	Gopherus_agassizii
ENSXCOG00000004451	setd1ba	51	72.222	ENSGGOG00000006715	SETD1B	54	48.279	Gorilla_gorilla
ENSXCOG00000004451	setd1ba	99	76.831	ENSHBUG00000019992	setd1ba	54	81.194	Haplochromis_burtoni
ENSXCOG00000004451	setd1ba	55	79.341	ENSKMAG00000007804	setd1ba	55	78.932	Kryptolebias_marmoratus
ENSXCOG00000004451	setd1ba	99	70.081	ENSLBEG00000020113	setd1ba	55	74.044	Labrus_bergylta
ENSXCOG00000004451	setd1ba	71	57.879	ENSLACG00000018379	SETD1B	88	55.749	Latimeria_chalumnae
ENSXCOG00000004451	setd1ba	69	78.154	ENSLAFG00000026518	SETD1B	87	50.371	Loxodonta_africana
ENSXCOG00000004451	setd1ba	63	57.074	ENSMFAG00000030930	SETD1B	86	58.199	Macaca_fascicularis
ENSXCOG00000004451	setd1ba	52	66.019	ENSMMUG00000003233	SETD1A	75	56.452	Macaca_mulatta
ENSXCOG00000004451	setd1ba	60	57.074	ENSMLEG00000039573	SETD1B	86	58.199	Mandrillus_leucophaeus
ENSXCOG00000004451	setd1ba	99	76.652	ENSMZEG00005026617	setd1ba	54	81.194	Maylandia_zebra
ENSXCOG00000004451	setd1ba	64	57.292	ENSMGAG00000004421	SETD1B	84	58.906	Meleagris_gallopavo
ENSXCOG00000004451	setd1ba	54	80.161	ENSMMOG00000008190	setd1ba	55	79.256	Mola_mola
ENSXCOG00000004451	setd1ba	99	76.794	ENSNBRG00000002915	setd1ba	56	80.897	Neolamprologus_brichardi
ENSXCOG00000004451	setd1ba	50	79.938	ENSNLEG00000001254	SETD1B	82	56.774	Nomascus_leucogenys
ENSXCOG00000004451	setd1ba	66	76.923	ENSODEG00000010155	SETD1B	88	53.446	Octodon_degus
ENSXCOG00000004451	setd1ba	99	76.270	ENSONIG00000013898	setd1ba	54	80.773	Oreochromis_niloticus
ENSXCOG00000004451	setd1ba	65	69.104	ENSORLG00015004156	setd1ba	81	76.407	Oryzias_latipes_hsok
ENSXCOG00000004451	setd1ba	99	71.111	ENSOMEG00000002270	setd1ba	56	76.855	Oryzias_melastigma
ENSXCOG00000004451	setd1ba	70	78.274	ENSPPRG00000021041	SETD1B	84	57.624	Panthera_pardus
ENSXCOG00000004451	setd1ba	86	77.815	ENSPMGG00000011527	setd1ba	91	77.815	Periophthalmus_magnuspinnatus
ENSXCOG00000004451	setd1ba	53	67.097	ENSPEMG00000024243	-	80	53.769	Peromyscus_maniculatus_bairdii
ENSXCOG00000004451	setd1ba	65	78.395	ENSPCIG00000028605	SETD1B	90	55.188	Phascolarctos_cinereus
ENSXCOG00000004451	setd1ba	99	90.125	ENSPFOG00000019768	setd1ba	100	90.235	Poecilia_formosa
ENSXCOG00000004451	setd1ba	99	88.859	ENSPLAG00000023459	setd1ba	100	89.295	Poecilia_latipinna
ENSXCOG00000004451	setd1ba	99	90.125	ENSPMEG00000020446	setd1ba	100	90.235	Poecilia_mexicana
ENSXCOG00000004451	setd1ba	99	92.635	ENSPREG00000011589	setd1ba	100	91.812	Poecilia_reticulata
ENSXCOG00000004451	setd1ba	99	76.740	ENSPNYG00000009484	setd1ba	56	80.897	Pundamilia_nyererei
ENSXCOG00000004451	setd1ba	75	56.181	ENSPNAG00000016011	setd1ba	90	62.871	Pygocentrus_nattereri
ENSXCOG00000004451	setd1ba	95	60.876	ENSSFOG00015015331	setd1ba	93	58.172	Scleropages_formosus
ENSXCOG00000004451	setd1ba	77	71.579	ENSSFOG00015004814	SETD1B	87	76.081	Scleropages_formosus
ENSXCOG00000004451	setd1ba	55	82.041	ENSSLDG00000015543	setd1ba	56	81.060	Seriola_lalandi_dorsalis
ENSXCOG00000004451	setd1ba	54	72.965	ENSSPUG00000011847	SETD1B	87	52.293	Sphenodon_punctatus
ENSXCOG00000004451	setd1ba	99	77.514	ENSSPAG00000015470	setd1ba	100	76.865	Stegastes_partitus
ENSXCOG00000004451	setd1ba	66	77.976	ENSSSCG00000009806	SETD1B	91	59.240	Sus_scrofa
ENSXCOG00000004451	setd1ba	66	77.679	ENSUAMG00000008729	SETD1B	82	54.232	Ursus_americanus
ENSXCOG00000004451	setd1ba	95	55.958	ENSXETG00000003760	setd1b	89	53.008	Xenopus_tropicalis
ENSXCOG00000004451	setd1ba	99	95.487	ENSXMAG00000014097	setd1ba	100	96.009	Xiphophorus_maculatus