EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000004611 (Gene tree)
Gene ID: -
Gene Symbol: parp1
Alias: si:dkey-206f10.3|wu:fc60f12|zgc:110092
Full Name: poly (ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 5337 bases
Position: chrKQ557207.1:11310918-11316254
Accession: ZDB-GENE-030131-3955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000005941	PARP	PF00644.20	8e-75	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000006007	-	1242	-	ENSXCOP00000005941	413 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000004611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000004611's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000004611	parp1	98	33.953	ENSXCOG00000020013	parp3	80	33.953

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000004611	parp1	99	41.609	WBGene00004049	parp-1	100	43.774	Caenorhabditis_elegans
ENSXCOG00000004611	parp1	100	57.442	ENSCING00000019384	-	91	57.209	Ciona_intestinalis
ENSXCOG00000004611	parp1	100	73.508	MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	Mus_caroli
ENSXCOG00000004611	parp1	100	73.508	ENSMUSG00000026496	Parp1	99	78.571	Mus_musculus
ENSXCOG00000004611	parp1	100	73.508	MGP_SPRETEiJ_G0015777	Parp1	100	78.571	Mus_spretus
ENSXCOG00000004611	parp1	94	79.849	ENSOMEG00000007822	parp1	96	79.849	Oryzias_melastigma
ENSXCOG00000004611	parp1	100	73.508	ENSRBIG00000044893	PARP1	99	68.258	Rhinopithecus_bieti
ENSXCOG00000004611	parp1	100	73.508	ENSRROG00000029280	PARP1	99	68.258	Rhinopithecus_roxellana
ENSXCOG00000004611	parp1	92	66.321	ENSRROG00000040615	-	97	56.883	Rhinopithecus_roxellana