EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000004665 (Gene tree)
Gene ID: -
Gene Symbol: exosc10
Alias: zgc:55695
Full Name: exosome component 10
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 11077 bases
Position: chrKQ557201.1:10598524-10609600
Accession: ZDB-GENE-040426-781
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000006035	HRDC	PF00570.23	9.4e-12	1	1
ENSXCOP00000006034	HRDC	PF00570.23	9.9e-12	1	1
ENSXCOP00000006035	PMC2NT	PF08066.12	1.2e-23	1	1
ENSXCOP00000006034	PMC2NT	PF08066.12	1.4e-23	1	1
ENSXCOP00000006035	DNA_pol_A_exo1	PF01612.20	2.5e-47	1	1
ENSXCOP00000006034	DNA_pol_A_exo1	PF01612.20	2.9e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000006103	-	2490	-	ENSXCOP00000006035	829 (aa)	-	-
ENSXCOT00000006102	-	2655	-	ENSXCOP00000006034	884 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000004665's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000004665's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000004665	exosc10	97	62.100	ENSG00000171824	EXOSC10	97	62.529	Homo_sapiens
ENSXCOG00000004665	exosc10	100	83.408	ENSAPOG00000013304	exosc10	100	83.408	Acanthochromis_polyacanthus
ENSXCOG00000004665	exosc10	97	62.989	ENSAMEG00000009546	EXOSC10	97	62.989	Ailuropoda_melanoleuca
ENSXCOG00000004665	exosc10	95	78.277	ENSACIG00000020455	exosc10	96	78.207	Amphilophus_citrinellus
ENSXCOG00000004665	exosc10	100	77.005	ENSAOCG00000018823	exosc10	100	77.712	Amphiprion_ocellaris
ENSXCOG00000004665	exosc10	100	82.511	ENSAPEG00000017786	exosc10	99	82.511	Amphiprion_percula
ENSXCOG00000004665	exosc10	100	83.184	ENSATEG00000017271	exosc10	100	83.184	Anabas_testudineus
ENSXCOG00000004665	exosc10	96	62.326	ENSAPLG00000006652	EXOSC10	98	62.209	Anas_platyrhynchos
ENSXCOG00000004665	exosc10	95	59.557	ENSANAG00000031112	EXOSC10	99	59.441	Aotus_nancymaae
ENSXCOG00000004665	exosc10	98	82.326	ENSACLG00000025226	exosc10	99	82.063	Astatotilapia_calliptera
ENSXCOG00000004665	exosc10	97	66.667	ENSAMXG00000014510	exosc10	97	66.404	Astyanax_mexicanus
ENSXCOG00000004665	exosc10	79	67.411	ENSBTAG00000002590	EXOSC10	96	67.411	Bos_taurus
ENSXCOG00000004665	exosc10	67	36.814	WBGene00000796	crn-3	62	36.814	Caenorhabditis_elegans
ENSXCOG00000004665	exosc10	98	61.382	ENSCJAG00000002327	EXOSC10	98	61.117	Callithrix_jacchus
ENSXCOG00000004665	exosc10	97	62.831	ENSCAFG00000016721	EXOSC10	95	62.831	Canis_familiaris
ENSXCOG00000004665	exosc10	97	62.831	ENSCAFG00020002481	EXOSC10	95	62.831	Canis_lupus_dingo
ENSXCOG00000004665	exosc10	97	59.122	ENSCHIG00000020022	EXOSC10	97	59.122	Capra_hircus
ENSXCOG00000004665	exosc10	97	58.668	ENSTSYG00000006937	EXOSC10	97	58.553	Carlito_syrichta
ENSXCOG00000004665	exosc10	96	61.494	ENSCAPG00000006494	EXOSC10	99	61.467	Cavia_aperea
ENSXCOG00000004665	exosc10	98	61.320	ENSCPOG00000011628	EXOSC10	97	61.320	Cavia_porcellus
ENSXCOG00000004665	exosc10	99	58.137	ENSCCAG00000023223	EXOSC10	100	61.605	Cebus_capucinus
ENSXCOG00000004665	exosc10	97	62.295	ENSCATG00000039000	EXOSC10	91	69.458	Cercocebus_atys
ENSXCOG00000004665	exosc10	98	60.795	ENSCLAG00000005283	EXOSC10	98	60.682	Chinchilla_lanigera
ENSXCOG00000004665	exosc10	99	61.229	ENSCSAG00000000788	EXOSC10	99	61.642	Chlorocebus_sabaeus
ENSXCOG00000004665	exosc10	83	66.294	ENSCHOG00000012713	EXOSC10	85	65.385	Choloepus_hoffmanni
ENSXCOG00000004665	exosc10	97	63.291	ENSCPBG00000022004	EXOSC10	96	63.176	Chrysemys_picta_bellii
ENSXCOG00000004665	exosc10	66	48.845	ENSCSAVG00000009049	-	97	48.034	Ciona_savignyi
ENSXCOG00000004665	exosc10	97	61.927	ENSCANG00000042813	EXOSC10	97	62.255	Colobus_angolensis_palliatus
ENSXCOG00000004665	exosc10	98	61.382	ENSCGRG00001018469	Exosc10	98	61.268	Cricetulus_griseus_chok1gshd
ENSXCOG00000004665	exosc10	98	61.155	ENSCGRG00000002278	Exosc10	98	61.042	Cricetulus_griseus_crigri
ENSXCOG00000004665	exosc10	99	79.007	ENSCSEG00000005346	exosc10	98	79.007	Cynoglossus_semilaevis
ENSXCOG00000004665	exosc10	100	89.551	ENSCVAG00000016429	exosc10	100	89.438	Cyprinodon_variegatus
ENSXCOG00000004665	exosc10	97	67.426	ENSDARG00000037708	exosc10	97	68.672	Danio_rerio
ENSXCOG00000004665	exosc10	97	61.547	ENSDNOG00000011301	EXOSC10	98	61.433	Dasypus_novemcinctus
ENSXCOG00000004665	exosc10	97	58.525	ENSDORG00000003769	Exosc10	97	58.410	Dipodomys_ordii
ENSXCOG00000004665	exosc10	78	38.978	FBgn0038269	Rrp6	72	39.213	Drosophila_melanogaster
ENSXCOG00000004665	exosc10	93	60.938	ENSETEG00000000830	EXOSC10	97	61.232	Echinops_telfairi
ENSXCOG00000004665	exosc10	72	35.725	ENSEBUG00000004395	exosc10	99	36.683	Eptatretus_burgeri
ENSXCOG00000004665	exosc10	96	62.299	ENSEASG00005018716	EXOSC10	93	72.679	Equus_asinus_asinus
ENSXCOG00000004665	exosc10	97	63.043	ENSECAG00000011639	EXOSC10	97	63.043	Equus_caballus
ENSXCOG00000004665	exosc10	73	62.620	ENSEEUG00000001166	EXOSC10	72	63.040	Erinaceus_europaeus
ENSXCOG00000004665	exosc10	98	73.739	ENSELUG00000012870	exosc10	98	73.732	Esox_lucius
ENSXCOG00000004665	exosc10	97	61.856	ENSFCAG00000000052	EXOSC10	97	61.856	Felis_catus
ENSXCOG00000004665	exosc10	97	60.343	ENSFALG00000010287	EXOSC10	96	60.229	Ficedula_albicollis
ENSXCOG00000004665	exosc10	98	61.206	ENSFDAG00000002942	EXOSC10	98	61.092	Fukomys_damarensis
ENSXCOG00000004665	exosc10	100	88.777	ENSFHEG00000010678	exosc10	100	88.777	Fundulus_heteroclitus
ENSXCOG00000004665	exosc10	85	76.568	ENSGMOG00000006131	exosc10	90	76.568	Gadus_morhua
ENSXCOG00000004665	exosc10	99	60.382	ENSGALG00000003086	EXOSC10	97	60.382	Gallus_gallus
ENSXCOG00000004665	exosc10	99	95.918	ENSGAFG00000019222	exosc10	99	95.918	Gambusia_affinis
ENSXCOG00000004665	exosc10	99	75.734	ENSGACG00000007037	exosc10	100	75.734	Gasterosteus_aculeatus
ENSXCOG00000004665	exosc10	99	61.443	ENSGAGG00000000251	EXOSC10	100	61.605	Gopherus_agassizii
ENSXCOG00000004665	exosc10	97	62.100	ENSGGOG00000010572	EXOSC10	97	62.529	Gorilla_gorilla
ENSXCOG00000004665	exosc10	99	74.854	ENSHBUG00000020328	exosc10	100	74.856	Haplochromis_burtoni
ENSXCOG00000004665	exosc10	98	61.433	ENSHGLG00000011944	EXOSC10	98	61.320	Heterocephalus_glaber_female
ENSXCOG00000004665	exosc10	98	61.433	ENSHGLG00100014444	EXOSC10	98	61.320	Heterocephalus_glaber_male
ENSXCOG00000004665	exosc10	100	75.000	ENSHCOG00000016164	exosc10	99	75.448	Hippocampus_comes
ENSXCOG00000004665	exosc10	98	68.290	ENSIPUG00000021971	exosc10	98	68.290	Ictalurus_punctatus
ENSXCOG00000004665	exosc10	97	62.140	ENSSTOG00000005459	EXOSC10	97	62.025	Ictidomys_tridecemlineatus
ENSXCOG00000004665	exosc10	97	61.829	ENSJJAG00000013716	Exosc10	98	61.512	Jaculus_jaculus
ENSXCOG00000004665	exosc10	100	83.969	ENSKMAG00000015540	exosc10	100	83.969	Kryptolebias_marmoratus
ENSXCOG00000004665	exosc10	100	81.951	ENSLBEG00000022229	exosc10	99	81.951	Labrus_bergylta
ENSXCOG00000004665	exosc10	97	63.574	ENSLACG00000016691	EXOSC10	97	63.501	Latimeria_chalumnae
ENSXCOG00000004665	exosc10	98	69.012	ENSLOCG00000006443	exosc10	98	69.012	Lepisosteus_oculatus
ENSXCOG00000004665	exosc10	98	61.705	ENSLAFG00000016894	EXOSC10	98	61.905	Loxodonta_africana
ENSXCOG00000004665	exosc10	97	62.295	ENSMFAG00000038874	EXOSC10	97	61.827	Macaca_fascicularis
ENSXCOG00000004665	exosc10	97	62.171	ENSMMUG00000019322	EXOSC10	97	62.371	Macaca_mulatta
ENSXCOG00000004665	exosc10	97	62.171	ENSMNEG00000035812	EXOSC10	97	62.371	Macaca_nemestrina
ENSXCOG00000004665	exosc10	97	62.286	ENSMLEG00000025160	EXOSC10	97	62.716	Mandrillus_leucophaeus
ENSXCOG00000004665	exosc10	99	80.455	ENSMAMG00000019375	exosc10	100	80.455	Mastacembelus_armatus
ENSXCOG00000004665	exosc10	98	82.326	ENSMZEG00005013730	exosc10	99	82.063	Maylandia_zebra
ENSXCOG00000004665	exosc10	96	60.834	ENSMGAG00000004665	EXOSC10	99	60.718	Meleagris_gallopavo
ENSXCOG00000004665	exosc10	68	71.076	ENSMAUG00000019261	Exosc10	97	69.064	Mesocricetus_auratus
ENSXCOG00000004665	exosc10	97	62.874	ENSMICG00000003858	EXOSC10	97	62.759	Microcebus_murinus
ENSXCOG00000004665	exosc10	68	71.076	ENSMOCG00000016509	Exosc10	93	70.681	Microtus_ochrogaster
ENSXCOG00000004665	exosc10	100	75.810	ENSMMOG00000009265	exosc10	100	75.810	Mola_mola
ENSXCOG00000004665	exosc10	97	61.353	ENSMODG00000011194	EXOSC10	97	61.927	Monodelphis_domestica
ENSXCOG00000004665	exosc10	100	79.843	ENSMALG00000021322	exosc10	100	79.843	Monopterus_albus
ENSXCOG00000004665	exosc10	98	61.818	MGP_CAROLIEiJ_G0026802	Exosc10	97	68.491	Mus_caroli
ENSXCOG00000004665	exosc10	97	61.494	ENSMUSG00000017264	Exosc10	97	68.325	Mus_musculus
ENSXCOG00000004665	exosc10	97	62.227	MGP_PahariEiJ_G0029150	Exosc10	93	70.415	Mus_pahari
ENSXCOG00000004665	exosc10	97	61.609	MGP_SPRETEiJ_G0027795	Exosc10	97	68.325	Mus_spretus
ENSXCOG00000004665	exosc10	98	61.986	ENSMPUG00000016434	EXOSC10	96	61.986	Mustela_putorius_furo
ENSXCOG00000004665	exosc10	98	61.765	ENSMLUG00000004276	EXOSC10	98	62.187	Myotis_lucifugus
ENSXCOG00000004665	exosc10	97	61.680	ENSNGAG00000023829	Exosc10	97	61.565	Nannospalax_galili
ENSXCOG00000004665	exosc10	99	77.844	ENSNBRG00000006256	exosc10	100	78.037	Neolamprologus_brichardi
ENSXCOG00000004665	exosc10	96	61.839	ENSNLEG00000009539	EXOSC10	96	62.153	Nomascus_leucogenys
ENSXCOG00000004665	exosc10	65	89.189	ENSMEUG00000007020	-	65	89.189	Notamacropus_eugenii
ENSXCOG00000004665	exosc10	97	62.415	ENSOPRG00000012091	EXOSC10	98	62.301	Ochotona_princeps
ENSXCOG00000004665	exosc10	98	61.092	ENSODEG00000013285	EXOSC10	98	60.978	Octodon_degus
ENSXCOG00000004665	exosc10	88	82.615	ENSONIG00000002322	exosc10	99	84.258	Oreochromis_niloticus
ENSXCOG00000004665	exosc10	98	58.493	ENSOANG00000013322	EXOSC10	98	58.586	Ornithorhynchus_anatinus
ENSXCOG00000004665	exosc10	98	62.018	ENSOCUG00000013039	EXOSC10	99	61.905	Oryctolagus_cuniculus
ENSXCOG00000004665	exosc10	100	80.381	ENSORLG00000005117	exosc10	100	82.609	Oryzias_latipes
ENSXCOG00000004665	exosc10	100	81.054	ENSORLG00020013529	exosc10	100	81.166	Oryzias_latipes_hni
ENSXCOG00000004665	exosc10	100	81.054	ENSORLG00015005525	exosc10	100	81.054	Oryzias_latipes_hsok
ENSXCOG00000004665	exosc10	100	80.045	ENSOMEG00000003337	exosc10	100	80.045	Oryzias_melastigma
ENSXCOG00000004665	exosc10	97	57.732	ENSOGAG00000013662	EXOSC10	97	57.617	Otolemur_garnettii
ENSXCOG00000004665	exosc10	97	61.741	ENSOARG00000003668	EXOSC10	97	61.741	Ovis_aries
ENSXCOG00000004665	exosc10	97	62.116	ENSPPAG00000038356	EXOSC10	97	62.428	Pan_paniscus
ENSXCOG00000004665	exosc10	97	61.627	ENSPPRG00000022976	EXOSC10	97	61.627	Panthera_pardus
ENSXCOG00000004665	exosc10	93	62.136	ENSPTIG00000012735	EXOSC10	96	62.545	Panthera_tigris_altaica
ENSXCOG00000004665	exosc10	97	59.382	ENSPTRG00000000140	EXOSC10	97	59.447	Pan_troglodytes
ENSXCOG00000004665	exosc10	97	61.486	ENSPANG00000026088	EXOSC10	97	61.910	Papio_anubis
ENSXCOG00000004665	exosc10	100	66.257	ENSPKIG00000013098	exosc10	98	66.480	Paramormyrops_kingsleyae
ENSXCOG00000004665	exosc10	100	59.933	ENSPSIG00000005078	EXOSC10	99	59.911	Pelodiscus_sinensis
ENSXCOG00000004665	exosc10	70	83.564	ENSPMGG00000022241	exosc10	99	83.163	Periophthalmus_magnuspinnatus
ENSXCOG00000004665	exosc10	81	65.906	ENSPEMG00000007753	Exosc10	97	66.714	Peromyscus_maniculatus_bairdii
ENSXCOG00000004665	exosc10	59	52.227	ENSPMAG00000006909	exosc10	100	52.227	Petromyzon_marinus
ENSXCOG00000004665	exosc10	96	57.229	ENSPCIG00000004840	EXOSC10	92	71.352	Phascolarctos_cinereus
ENSXCOG00000004665	exosc10	100	94.164	ENSPFOG00000004744	exosc10	100	94.164	Poecilia_formosa
ENSXCOG00000004665	exosc10	100	94.388	ENSPLAG00000010253	exosc10	99	94.388	Poecilia_latipinna
ENSXCOG00000004665	exosc10	100	93.939	ENSPMEG00000005740	exosc10	100	93.939	Poecilia_mexicana
ENSXCOG00000004665	exosc10	100	93.490	ENSPREG00000016285	exosc10	99	93.715	Poecilia_reticulata
ENSXCOG00000004665	exosc10	97	61.705	ENSPPYG00000001891	EXOSC10	95	62.128	Pongo_abelii
ENSXCOG00000004665	exosc10	83	62.981	ENSPCAG00000001583	EXOSC10	93	62.679	Procavia_capensis
ENSXCOG00000004665	exosc10	97	62.601	ENSPCOG00000013742	EXOSC10	97	62.486	Propithecus_coquereli
ENSXCOG00000004665	exosc10	98	62.144	ENSPVAG00000014780	EXOSC10	98	62.144	Pteropus_vampyrus
ENSXCOG00000004665	exosc10	98	82.440	ENSPNYG00000007387	exosc10	99	82.175	Pundamilia_nyererei
ENSXCOG00000004665	exosc10	98	66.444	ENSPNAG00000028864	exosc10	99	66.850	Pygocentrus_nattereri
ENSXCOG00000004665	exosc10	97	62.025	ENSRNOG00000010719	Exosc10	97	61.910	Rattus_norvegicus
ENSXCOG00000004665	exosc10	97	55.530	ENSRBIG00000039772	EXOSC10	97	55.645	Rhinopithecus_bieti
ENSXCOG00000004665	exosc10	97	62.371	ENSRROG00000036700	EXOSC10	97	62.371	Rhinopithecus_roxellana
ENSXCOG00000004665	exosc10	64	36.594	YOR001W	-	68	36.842	Saccharomyces_cerevisiae
ENSXCOG00000004665	exosc10	97	56.617	ENSSBOG00000020768	EXOSC10	99	56.502	Saimiri_boliviensis_boliviensis
ENSXCOG00000004665	exosc10	96	59.907	ENSSHAG00000013572	EXOSC10	100	60.490	Sarcophilus_harrisii
ENSXCOG00000004665	exosc10	95	67.057	ENSSFOG00015004512	exosc10	98	67.175	Scleropages_formosus
ENSXCOG00000004665	exosc10	98	81.307	ENSSMAG00000017318	exosc10	100	79.866	Scophthalmus_maximus
ENSXCOG00000004665	exosc10	100	83.072	ENSSDUG00000006646	exosc10	100	83.072	Seriola_dumerili
ENSXCOG00000004665	exosc10	100	82.735	ENSSLDG00000025554	exosc10	100	82.735	Seriola_lalandi_dorsalis
ENSXCOG00000004665	exosc10	82	51.549	ENSSARG00000013171	EXOSC10	99	50.604	Sorex_araneus
ENSXCOG00000004665	exosc10	95	61.799	ENSSPUG00000006844	EXOSC10	95	72.007	Sphenodon_punctatus
ENSXCOG00000004665	exosc10	100	82.848	ENSSPAG00000007053	exosc10	100	82.848	Stegastes_partitus
ENSXCOG00000004665	exosc10	90	61.529	ENSSSCG00000003412	EXOSC10	100	61.652	Sus_scrofa
ENSXCOG00000004665	exosc10	96	59.977	ENSTGUG00000002231	EXOSC10	99	59.860	Taeniopygia_guttata
ENSXCOG00000004665	exosc10	99	78.121	ENSTRUG00000012484	exosc10	98	75.167	Takifugu_rubripes
ENSXCOG00000004665	exosc10	99	76.705	ENSTNIG00000015181	exosc10	99	78.687	Tetraodon_nigroviridis
ENSXCOG00000004665	exosc10	69	72.180	ENSTBEG00000017471	-	69	72.180	Tupaia_belangeri
ENSXCOG00000004665	exosc10	97	62.014	ENSTTRG00000001320	EXOSC10	97	62.014	Tursiops_truncatus
ENSXCOG00000004665	exosc10	93	62.425	ENSUAMG00000014404	EXOSC10	96	62.425	Ursus_americanus
ENSXCOG00000004665	exosc10	97	60.784	ENSUMAG00000023413	EXOSC10	99	65.230	Ursus_maritimus
ENSXCOG00000004665	exosc10	66	73.309	ENSVPAG00000004629	EXOSC10	62	73.309	Vicugna_pacos
ENSXCOG00000004665	exosc10	90	61.852	ENSVVUG00000027116	EXOSC10	100	61.852	Vulpes_vulpes
ENSXCOG00000004665	exosc10	97	55.493	ENSXETG00000006318	exosc10	99	55.493	Xenopus_tropicalis
ENSXCOG00000004665	exosc10	100	98.652	ENSXMAG00000011246	exosc10	99	98.652	Xiphophorus_maculatus