EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000004722 (Gene tree)
Gene ID: -
Gene Symbol: pus1
Alias: wu:fb98h11|zgc:103516
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 2371 bases
Position: chrKQ557223.1:15491686-15494056
Accession: ZDB-GENE-041212-26
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000006116	PseudoU_synth_1	PF01416.20	1.8e-15	1	1
ENSXCOP00000006120	PseudoU_synth_1	PF01416.20	2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000006189	-	1209	-	ENSXCOP00000006120	402 (aa)	-	-
ENSXCOT00000006186	-	1161	-	ENSXCOP00000006116	386 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000004722's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000004722's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000004722	pus1	96	66.846	ENSG00000177192	PUS1	91	69.801	Homo_sapiens
ENSXCOG00000004722	pus1	98	87.368	ENSAPOG00000007254	pus1	94	85.859	Acanthochromis_polyacanthus
ENSXCOG00000004722	pus1	91	68.839	ENSAMEG00000013715	PUS1	90	65.867	Ailuropoda_melanoleuca
ENSXCOG00000004722	pus1	97	86.508	ENSACIG00000009169	pus1	95	84.557	Amphilophus_citrinellus
ENSXCOG00000004722	pus1	98	88.714	ENSAOCG00000022207	pus1	94	87.374	Amphiprion_ocellaris
ENSXCOG00000004722	pus1	98	88.684	ENSAPEG00000006039	pus1	99	87.724	Amphiprion_percula
ENSXCOG00000004722	pus1	98	86.842	ENSATEG00000020688	pus1	100	85.678	Anabas_testudineus
ENSXCOG00000004722	pus1	88	72.222	ENSACAG00000007367	PUS1	91	72.222	Anolis_carolinensis
ENSXCOG00000004722	pus1	84	69.040	ENSANAG00000036192	PUS1	99	69.040	Aotus_nancymaae
ENSXCOG00000004722	pus1	97	87.863	ENSACLG00000020868	pus1	100	86.701	Astatotilapia_calliptera
ENSXCOG00000004722	pus1	99	75.591	ENSAMXG00000008710	pus1	89	74.227	Astyanax_mexicanus
ENSXCOG00000004722	pus1	96	65.946	ENSBTAG00000012990	PUS1	96	63.636	Bos_taurus
ENSXCOG00000004722	pus1	89	38.268	WBGene00004248	pus-1	85	38.268	Caenorhabditis_elegans
ENSXCOG00000004722	pus1	66	69.291	ENSCJAG00000003720	PUS1	70	68.992	Callithrix_jacchus
ENSXCOG00000004722	pus1	90	69.914	ENSCAFG00000006429	PUS1	87	69.914	Canis_familiaris
ENSXCOG00000004722	pus1	90	69.914	ENSCAFG00020010737	PUS1	81	69.914	Canis_lupus_dingo
ENSXCOG00000004722	pus1	96	66.486	ENSCHIG00000000487	PUS1	96	64.156	Capra_hircus
ENSXCOG00000004722	pus1	95	67.760	ENSTSYG00000032605	PUS1	99	67.760	Carlito_syrichta
ENSXCOG00000004722	pus1	77	71.906	ENSCAPG00000006421	PUS1	99	68.421	Cavia_aperea
ENSXCOG00000004722	pus1	89	69.006	ENSCPOG00000001027	PUS1	87	65.405	Cavia_porcellus
ENSXCOG00000004722	pus1	95	66.393	ENSCCAG00000015879	PUS1	90	68.308	Cebus_capucinus
ENSXCOG00000004722	pus1	95	66.486	ENSCATG00000032870	PUS1	83	72.368	Cercocebus_atys
ENSXCOG00000004722	pus1	89	68.713	ENSCLAG00000011689	PUS1	87	65.135	Chinchilla_lanigera
ENSXCOG00000004722	pus1	95	66.757	ENSCSAG00000001879	PUS1	91	64.450	Chlorocebus_sabaeus
ENSXCOG00000004722	pus1	81	72.611	ENSCPBG00000024715	PUS1	93	70.732	Chrysemys_picta_bellii
ENSXCOG00000004722	pus1	89	44.898	ENSCING00000009426	-	91	44.898	Ciona_intestinalis
ENSXCOG00000004722	pus1	83	44.201	ENSCSAVG00000003751	-	66	44.201	Ciona_savignyi
ENSXCOG00000004722	pus1	95	59.563	ENSCANG00000035561	PUS1	89	62.195	Colobus_angolensis_palliatus
ENSXCOG00000004722	pus1	93	68.245	ENSCGRG00001019592	Pus1	84	68.245	Cricetulus_griseus_chok1gshd
ENSXCOG00000004722	pus1	93	68.245	ENSCGRG00000004048	Pus1	91	68.245	Cricetulus_griseus_crigri
ENSXCOG00000004722	pus1	98	78.421	ENSCSEG00000003629	pus1	94	77.273	Cynoglossus_semilaevis
ENSXCOG00000004722	pus1	98	89.446	ENSCVAG00000001265	pus1	95	88.636	Cyprinodon_variegatus
ENSXCOG00000004722	pus1	98	68.205	ENSDARG00000045562	pus1	97	76.471	Danio_rerio
ENSXCOG00000004722	pus1	92	67.514	ENSDNOG00000045576	PUS1	99	67.385	Dasypus_novemcinctus
ENSXCOG00000004722	pus1	84	69.659	ENSDORG00000011455	Pus1	99	69.659	Dipodomys_ordii
ENSXCOG00000004722	pus1	89	46.439	FBgn0038811	PUS1	84	46.439	Drosophila_melanogaster
ENSXCOG00000004722	pus1	89	69.298	ENSETEG00000019160	PUS1	85	68.195	Echinops_telfairi
ENSXCOG00000004722	pus1	88	44.353	ENSEBUG00000000368	-	68	44.262	Eptatretus_burgeri
ENSXCOG00000004722	pus1	95	66.213	ENSEASG00005016535	PUS1	85	66.213	Equus_asinus_asinus
ENSXCOG00000004722	pus1	95	66.213	ENSECAG00000006965	PUS1	92	66.213	Equus_caballus
ENSXCOG00000004722	pus1	98	77.225	ENSELUG00000010424	pus1	99	76.215	Esox_lucius
ENSXCOG00000004722	pus1	90	68.786	ENSFCAG00000010780	PUS1	81	69.388	Felis_catus
ENSXCOG00000004722	pus1	98	64.865	ENSFALG00000008273	PUS1	95	64.865	Ficedula_albicollis
ENSXCOG00000004722	pus1	95	66.757	ENSFDAG00000012518	PUS1	91	65.867	Fukomys_damarensis
ENSXCOG00000004722	pus1	98	92.612	ENSFHEG00000010504	pus1	95	91.688	Fundulus_heteroclitus
ENSXCOG00000004722	pus1	98	76.316	ENSGMOG00000008143	pus1	99	75.128	Gadus_morhua
ENSXCOG00000004722	pus1	99	67.866	ENSGALG00000002354	PUS1	95	67.866	Gallus_gallus
ENSXCOG00000004722	pus1	98	98.485	ENSGAFG00000006578	pus1	95	98.485	Gambusia_affinis
ENSXCOG00000004722	pus1	98	85.526	ENSGACG00000017566	pus1	99	84.910	Gasterosteus_aculeatus
ENSXCOG00000004722	pus1	85	69.207	ENSGAGG00000016730	-	94	69.207	Gopherus_agassizii
ENSXCOG00000004722	pus1	66	30.662	ENSGAGG00000000160	PUS3	52	30.662	Gopherus_agassizii
ENSXCOG00000004722	pus1	96	67.116	ENSGGOG00000009178	PUS1	87	69.231	Gorilla_gorilla
ENSXCOG00000004722	pus1	97	88.391	ENSHBUG00000001316	pus1	100	87.212	Haplochromis_burtoni
ENSXCOG00000004722	pus1	74	30.599	ENSHGLG00000015753	-	80	30.599	Heterocephalus_glaber_female
ENSXCOG00000004722	pus1	93	65.738	ENSHGLG00000016086	PUS1	93	64.481	Heterocephalus_glaber_female
ENSXCOG00000004722	pus1	93	65.460	ENSHGLG00100019362	PUS1	93	64.208	Heterocephalus_glaber_male
ENSXCOG00000004722	pus1	97	80.106	ENSHCOG00000014288	pus1	91	77.975	Hippocampus_comes
ENSXCOG00000004722	pus1	97	77.867	ENSIPUG00000010387	pus1	91	78.904	Ictalurus_punctatus
ENSXCOG00000004722	pus1	91	68.169	ENSSTOG00000011245	PUS1	86	65.847	Ictidomys_tridecemlineatus
ENSXCOG00000004722	pus1	93	67.967	ENSJJAG00000000088	Pus1	85	67.967	Jaculus_jaculus
ENSXCOG00000004722	pus1	97	84.433	ENSKMAG00000012702	pus1	94	82.116	Kryptolebias_marmoratus
ENSXCOG00000004722	pus1	98	84.697	ENSLBEG00000002845	pus1	100	82.020	Labrus_bergylta
ENSXCOG00000004722	pus1	93	68.508	ENSLACG00000018598	PUS1	96	66.494	Latimeria_chalumnae
ENSXCOG00000004722	pus1	84	57.716	ENSLACG00000016044	-	98	57.716	Latimeria_chalumnae
ENSXCOG00000004722	pus1	97	69.474	ENSLOCG00000006127	pus1	100	67.758	Lepisosteus_oculatus
ENSXCOG00000004722	pus1	91	67.614	ENSLAFG00000028731	PUS1	94	67.614	Loxodonta_africana
ENSXCOG00000004722	pus1	95	66.757	ENSMFAG00000041194	PUS1	83	72.697	Macaca_fascicularis
ENSXCOG00000004722	pus1	95	66.307	ENSMMUG00000031463	PUS1	87	72.697	Macaca_mulatta
ENSXCOG00000004722	pus1	95	66.757	ENSMNEG00000002814	PUS1	83	72.697	Macaca_nemestrina
ENSXCOG00000004722	pus1	79	72.697	ENSMLEG00000043560	PUS1	92	72.848	Mandrillus_leucophaeus
ENSXCOG00000004722	pus1	98	87.632	ENSMAMG00000007371	pus1	94	86.364	Mastacembelus_armatus
ENSXCOG00000004722	pus1	97	88.127	ENSMZEG00005017746	pus1	94	86.364	Maylandia_zebra
ENSXCOG00000004722	pus1	83	73.375	ENSMGAG00000001958	PUS1	98	73.375	Meleagris_gallopavo
ENSXCOG00000004722	pus1	95	68.033	ENSMAUG00000001482	Pus1	86	68.033	Mesocricetus_auratus
ENSXCOG00000004722	pus1	95	67.302	ENSMICG00000030980	PUS1	90	67.302	Microcebus_murinus
ENSXCOG00000004722	pus1	97	66.756	ENSMOCG00000022311	Pus1	87	66.756	Microtus_ochrogaster
ENSXCOG00000004722	pus1	97	81.067	ENSMMOG00000021022	pus1	99	79.639	Mola_mola
ENSXCOG00000004722	pus1	88	68.876	ENSMODG00000015551	PUS1	83	66.757	Monodelphis_domestica
ENSXCOG00000004722	pus1	97	86.016	ENSMALG00000013202	pus1	98	80.788	Monopterus_albus
ENSXCOG00000004722	pus1	95	68.033	MGP_CAROLIEiJ_G0027551	Pus1	93	68.033	Mus_caroli
ENSXCOG00000004722	pus1	95	68.033	ENSMUSG00000029507	Pus1	93	68.033	Mus_musculus
ENSXCOG00000004722	pus1	94	68.595	MGP_PahariEiJ_G0024133	Pus1	92	68.595	Mus_pahari
ENSXCOG00000004722	pus1	95	68.033	MGP_SPRETEiJ_G0028549	Pus1	93	68.033	Mus_spretus
ENSXCOG00000004722	pus1	90	69.628	ENSMPUG00000002314	PUS1	88	69.628	Mustela_putorius_furo
ENSXCOG00000004722	pus1	94	65.746	ENSMLUG00000015790	PUS1	99	65.746	Myotis_lucifugus
ENSXCOG00000004722	pus1	93	68.802	ENSNGAG00000012976	Pus1	86	67.486	Nannospalax_galili
ENSXCOG00000004722	pus1	63	30.314	ENSNGAG00000013868	Pus3	54	30.314	Nannospalax_galili
ENSXCOG00000004722	pus1	97	88.889	ENSNBRG00000020502	pus1	99	89.008	Neolamprologus_brichardi
ENSXCOG00000004722	pus1	95	65.027	ENSNLEG00000008505	PUS1	99	69.108	Nomascus_leucogenys
ENSXCOG00000004722	pus1	89	63.081	ENSMEUG00000002825	PUS1	92	63.081	Notamacropus_eugenii
ENSXCOG00000004722	pus1	90	60.519	ENSOPRG00000002701	-	91	60.519	Ochotona_princeps
ENSXCOG00000004722	pus1	90	69.364	ENSODEG00000008248	PUS1	91	69.364	Octodon_degus
ENSXCOG00000004722	pus1	97	87.240	ENSONIG00000003803	pus1	100	85.894	Oreochromis_niloticus
ENSXCOG00000004722	pus1	94	67.403	ENSOANG00000010619	PUS1	85	66.486	Ornithorhynchus_anatinus
ENSXCOG00000004722	pus1	82	30.137	ENSOANG00000000406	PUS3	69	30.137	Ornithorhynchus_anatinus
ENSXCOG00000004722	pus1	90	69.341	ENSOCUG00000007310	PUS1	78	67.493	Oryctolagus_cuniculus
ENSXCOG00000004722	pus1	98	84.921	ENSORLG00000010787	pus1	95	84.091	Oryzias_latipes
ENSXCOG00000004722	pus1	98	85.185	ENSORLG00020011483	pus1	95	84.343	Oryzias_latipes_hni
ENSXCOG00000004722	pus1	98	85.185	ENSORLG00015023012	pus1	99	84.536	Oryzias_latipes_hsok
ENSXCOG00000004722	pus1	96	84.011	ENSOMEG00000022655	pus1	91	83.377	Oryzias_melastigma
ENSXCOG00000004722	pus1	95	67.302	ENSOGAG00000008720	PUS1	95	67.302	Otolemur_garnettii
ENSXCOG00000004722	pus1	96	66.216	ENSOARG00000013316	PUS1	88	63.896	Ovis_aries
ENSXCOG00000004722	pus1	96	67.116	ENSPPAG00000040971	PUS1	87	69.538	Pan_paniscus
ENSXCOG00000004722	pus1	90	68.786	ENSPPRG00000015456	PUS1	87	68.786	Panthera_pardus
ENSXCOG00000004722	pus1	89	68.805	ENSPTIG00000004201	PUS1	90	68.786	Panthera_tigris_altaica
ENSXCOG00000004722	pus1	96	67.116	ENSPTRG00000005643	PUS1	87	69.538	Pan_troglodytes
ENSXCOG00000004722	pus1	95	66.757	ENSPANG00000000376	PUS1	83	72.697	Papio_anubis
ENSXCOG00000004722	pus1	94	69.126	ENSPKIG00000019369	pus1	88	66.667	Paramormyrops_kingsleyae
ENSXCOG00000004722	pus1	97	67.639	ENSPSIG00000016432	PUS1	88	67.895	Pelodiscus_sinensis
ENSXCOG00000004722	pus1	95	81.199	ENSPMGG00000004522	pus1	95	81.199	Periophthalmus_magnuspinnatus
ENSXCOG00000004722	pus1	95	67.760	ENSPEMG00000013448	Pus1	86	67.760	Peromyscus_maniculatus_bairdii
ENSXCOG00000004722	pus1	85	60.182	ENSPMAG00000004636	pus1	99	60.182	Petromyzon_marinus
ENSXCOG00000004722	pus1	78	61.716	ENSPCIG00000022609	-	74	60.191	Phascolarctos_cinereus
ENSXCOG00000004722	pus1	98	96.970	ENSPFOG00000019669	pus1	95	96.970	Poecilia_formosa
ENSXCOG00000004722	pus1	98	96.717	ENSPLAG00000002692	-	95	96.717	Poecilia_latipinna
ENSXCOG00000004722	pus1	98	96.717	ENSPLAG00000007185	pus1	95	96.717	Poecilia_latipinna
ENSXCOG00000004722	pus1	100	96.774	ENSPMEG00000006038	pus1	100	96.774	Poecilia_mexicana
ENSXCOG00000004722	pus1	98	96.717	ENSPMEG00000011115	PUS1	95	96.717	Poecilia_mexicana
ENSXCOG00000004722	pus1	100	97.015	ENSPREG00000007231	pus1	99	97.015	Poecilia_reticulata
ENSXCOG00000004722	pus1	96	66.577	ENSPPYG00000005132	PUS1	87	66.577	Pongo_abelii
ENSXCOG00000004722	pus1	69	66.541	ENSPCAG00000009110	-	65	66.541	Procavia_capensis
ENSXCOG00000004722	pus1	89	62.682	ENSPCOG00000015595	PUS1	90	60.656	Propithecus_coquereli
ENSXCOG00000004722	pus1	97	88.127	ENSPNYG00000013571	pus1	94	86.364	Pundamilia_nyererei
ENSXCOG00000004722	pus1	98	75.862	ENSPNAG00000003938	pus1	90	75.196	Pygocentrus_nattereri
ENSXCOG00000004722	pus1	95	67.486	ENSRNOG00000037500	Pus1	86	67.486	Rattus_norvegicus
ENSXCOG00000004722	pus1	95	66.940	ENSRBIG00000043177	PUS1	90	69.231	Rhinopithecus_bieti
ENSXCOG00000004722	pus1	95	66.940	ENSRROG00000039744	PUS1	88	68.771	Rhinopithecus_roxellana
ENSXCOG00000004722	pus1	87	42.667	YPL212C	-	63	41.358	Saccharomyces_cerevisiae
ENSXCOG00000004722	pus1	95	66.757	ENSSBOG00000023593	PUS1	93	68.712	Saimiri_boliviensis_boliviensis
ENSXCOG00000004722	pus1	94	68.044	ENSSHAG00000013193	PUS1	86	68.044	Sarcophilus_harrisii
ENSXCOG00000004722	pus1	96	70.942	ENSSFOG00015003463	pus1	94	67.153	Scleropages_formosus
ENSXCOG00000004722	pus1	98	85.117	ENSSMAG00000019075	pus1	94	84.091	Scophthalmus_maximus
ENSXCOG00000004722	pus1	98	88.158	ENSSDUG00000007102	pus1	94	86.869	Seriola_dumerili
ENSXCOG00000004722	pus1	98	87.632	ENSSLDG00000022850	pus1	94	86.364	Seriola_lalandi_dorsalis
ENSXCOG00000004722	pus1	78	63.576	ENSSARG00000008367	PUS1	98	63.366	Sorex_araneus
ENSXCOG00000004722	pus1	96	68.533	ENSSPUG00000010009	PUS1	93	68.533	Sphenodon_punctatus
ENSXCOG00000004722	pus1	98	85.526	ENSSPAG00000006272	pus1	99	84.655	Stegastes_partitus
ENSXCOG00000004722	pus1	95	67.213	ENSSSCG00000009741	PUS1	91	67.213	Sus_scrofa
ENSXCOG00000004722	pus1	85	73.333	ENSTGUG00000008068	PUS1	99	73.333	Taeniopygia_guttata
ENSXCOG00000004722	pus1	75	30.031	ENSTGUG00000000778	-	69	30.211	Taeniopygia_guttata
ENSXCOG00000004722	pus1	97	77.344	ENSTRUG00000002198	pus1	96	77.344	Takifugu_rubripes
ENSXCOG00000004722	pus1	95	77.322	ENSTNIG00000003942	pus1	94	76.738	Tetraodon_nigroviridis
ENSXCOG00000004722	pus1	96	65.229	ENSTTRG00000000632	PUS1	87	65.229	Tursiops_truncatus
ENSXCOG00000004722	pus1	90	69.054	ENSUAMG00000017197	PUS1	88	69.054	Ursus_americanus
ENSXCOG00000004722	pus1	94	66.756	ENSUMAG00000002831	PUS1	95	72.327	Ursus_maritimus
ENSXCOG00000004722	pus1	90	70.029	ENSVVUG00000004199	PUS1	79	70.231	Vulpes_vulpes
ENSXCOG00000004722	pus1	94	67.218	ENSXETG00000002030	pus1	91	66.667	Xenopus_tropicalis
ENSXCOG00000004722	pus1	83	48.916	ENSXETG00000033640	-	99	48.916	Xenopus_tropicalis
ENSXCOG00000004722	pus1	98	99.242	ENSXMAG00000000988	pus1	95	99.242	Xiphophorus_maculatus