EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000004835 (Gene tree)
Gene ID: -
Gene Symbol: ppargc1a
Alias: PGC1|gb:dq017637|ppargc1al
Full Name: peroxisome proliferator-activated receptor gamma%2C coactivator 1 alpha
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 49063 bases
Position: chrKQ557206.1:15487154-15536216
Accession: ZDB-GENE-080505-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000006262	RRM_1	PF00076.22	9.1e-07	1	1
ENSXCOP00000006260	RRM_1	PF00076.22	9.4e-07	1	1
ENSXCOP00000006258	RRM_1	PF00076.22	9.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000006335	-	2706	-	ENSXCOP00000006260	901 (aa)	-	-
ENSXCOT00000006337	-	2643	-	ENSXCOP00000006262	880 (aa)	-	-
ENSXCOT00000006333	-	2712	-	ENSXCOP00000006258	903 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000004835's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000004835's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000004835	ppargc1a	95	79.268	ENSG00000109819	PPARGC1A	86	88.000	Homo_sapiens
ENSXCOG00000004835	ppargc1a	95	95.565	ENSAPOG00000018632	ppargc1a	98	96.250	Acanthochromis_polyacanthus
ENSXCOG00000004835	ppargc1a	95	79.268	ENSAMEG00000010421	PPARGC1A	50	79.518	Ailuropoda_melanoleuca
ENSXCOG00000004835	ppargc1a	100	71.096	ENSACIG00000009732	ppargc1a	98	95.417	Amphilophus_citrinellus
ENSXCOG00000004835	ppargc1a	95	95.565	ENSAOCG00000006754	ppargc1a	98	96.250	Amphiprion_ocellaris
ENSXCOG00000004835	ppargc1a	92	95.510	ENSAPEG00000022574	ppargc1a	98	96.250	Amphiprion_percula
ENSXCOG00000004835	ppargc1a	92	94.332	ENSATEG00000016702	ppargc1a	98	95.000	Anabas_testudineus
ENSXCOG00000004835	ppargc1a	100	50.381	ENSAPLG00000005303	PPARGC1A	100	50.877	Anas_platyrhynchos
ENSXCOG00000004835	ppargc1a	100	50.649	ENSACAG00000000741	PPARGC1A	82	78.916	Anolis_carolinensis
ENSXCOG00000004835	ppargc1a	100	52.288	ENSANAG00000035930	PPARGC1A	50	79.518	Aotus_nancymaae
ENSXCOG00000004835	ppargc1a	95	94.096	ENSACLG00000001002	ppargc1a	98	95.417	Astatotilapia_calliptera
ENSXCOG00000004835	ppargc1a	93	96.053	ENSAMXG00000002461	ppargc1a	96	87.215	Astyanax_mexicanus
ENSXCOG00000004835	ppargc1a	94	78.182	ENSBTAG00000017024	PPARGC1A	50	78.313	Bos_taurus
ENSXCOG00000004835	ppargc1a	95	79.268	ENSCJAG00000013024	PPARGC1A	100	51.260	Callithrix_jacchus
ENSXCOG00000004835	ppargc1a	95	79.268	ENSCAFG00000016519	PPARGC1A	100	51.422	Canis_familiaris
ENSXCOG00000004835	ppargc1a	92	79.268	ENSCAFG00020027242	PPARGC1A	99	50.562	Canis_lupus_dingo
ENSXCOG00000004835	ppargc1a	100	52.735	ENSCHIG00000015991	PPARGC1A	96	70.638	Capra_hircus
ENSXCOG00000004835	ppargc1a	95	79.268	ENSTSYG00000010439	PPARGC1A	99	49.451	Carlito_syrichta
ENSXCOG00000004835	ppargc1a	93	78.659	ENSCPOG00000001518	PPARGC1A	50	78.916	Cavia_porcellus
ENSXCOG00000004835	ppargc1a	95	79.268	ENSCCAG00000024681	PPARGC1A	62	70.661	Cebus_capucinus
ENSXCOG00000004835	ppargc1a	95	79.268	ENSCATG00000032575	PPARGC1A	50	79.518	Cercocebus_atys
ENSXCOG00000004835	ppargc1a	95	78.049	ENSCLAG00000002058	PPARGC1A	50	78.313	Chinchilla_lanigera
ENSXCOG00000004835	ppargc1a	95	79.268	ENSCSAG00000016575	PPARGC1A	50	79.518	Chlorocebus_sabaeus
ENSXCOG00000004835	ppargc1a	95	79.268	ENSCANG00000033426	PPARGC1A	100	51.588	Colobus_angolensis_palliatus
ENSXCOG00000004835	ppargc1a	95	76.829	ENSCGRG00001015534	Ppargc1a	50	77.108	Cricetulus_griseus_chok1gshd
ENSXCOG00000004835	ppargc1a	95	76.829	ENSCGRG00000000200	Ppargc1a	50	77.108	Cricetulus_griseus_crigri
ENSXCOG00000004835	ppargc1a	95	93.952	ENSCSEG00000006884	ppargc1a	99	96.537	Cynoglossus_semilaevis
ENSXCOG00000004835	ppargc1a	100	80.823	ENSCVAG00000016547	ppargc1a	100	80.610	Cyprinodon_variegatus
ENSXCOG00000004835	ppargc1a	100	53.238	ENSDNOG00000041106	PPARGC1A	100	51.754	Dasypus_novemcinctus
ENSXCOG00000004835	ppargc1a	95	79.268	ENSEASG00005007984	PPARGC1A	50	79.518	Equus_asinus_asinus
ENSXCOG00000004835	ppargc1a	93	79.268	ENSECAG00000009164	PPARGC1A	64	47.664	Equus_caballus
ENSXCOG00000004835	ppargc1a	93	91.453	ENSELUG00000017027	ppargc1a	100	64.995	Esox_lucius
ENSXCOG00000004835	ppargc1a	100	52.580	ENSFCAG00000000043	PPARGC1A	100	51.206	Felis_catus
ENSXCOG00000004835	ppargc1a	99	50.556	ENSFALG00000009211	PPARGC1A	88	78.977	Ficedula_albicollis
ENSXCOG00000004835	ppargc1a	95	76.829	ENSFDAG00000005659	PPARGC1A	100	51.917	Fukomys_damarensis
ENSXCOG00000004835	ppargc1a	94	97.925	ENSFHEG00000021990	ppargc1a	96	97.917	Fundulus_heteroclitus
ENSXCOG00000004835	ppargc1a	100	51.031	ENSGALG00000042851	PPARGC1A	100	52.093	Gallus_gallus
ENSXCOG00000004835	ppargc1a	94	97.925	ENSGAFG00000015514	ppargc1a	98	97.917	Gambusia_affinis
ENSXCOG00000004835	ppargc1a	99	50.384	ENSGAGG00000007043	PPARGC1A	92	72.772	Gopherus_agassizii
ENSXCOG00000004835	ppargc1a	95	79.268	ENSGGOG00000009810	PPARGC1A	50	79.518	Gorilla_gorilla
ENSXCOG00000004835	ppargc1a	97	94.406	ENSHBUG00000005269	ppargc1a	98	95.833	Haplochromis_burtoni
ENSXCOG00000004835	ppargc1a	100	51.257	ENSHGLG00100000133	PPARGC1A	50	77.108	Heterocephalus_glaber_male
ENSXCOG00000004835	ppargc1a	100	68.482	ENSHCOG00000014886	ppargc1a	100	69.885	Hippocampus_comes
ENSXCOG00000004835	ppargc1a	95	78.049	ENSSTOG00000012522	PPARGC1A	50	78.313	Ictidomys_tridecemlineatus
ENSXCOG00000004835	ppargc1a	100	80.591	ENSKMAG00000005390	ppargc1a	98	96.053	Kryptolebias_marmoratus
ENSXCOG00000004835	ppargc1a	93	95.021	ENSLBEG00000019562	ppargc1a	98	95.000	Labrus_bergylta
ENSXCOG00000004835	ppargc1a	92	83.735	ENSLACG00000014054	PPARGC1A	84	78.261	Latimeria_chalumnae
ENSXCOG00000004835	ppargc1a	95	78.788	ENSLAFG00000012981	PPARGC1A	100	51.982	Loxodonta_africana
ENSXCOG00000004835	ppargc1a	95	79.268	ENSMFAG00000000534	PPARGC1A	50	79.518	Macaca_fascicularis
ENSXCOG00000004835	ppargc1a	95	79.268	ENSMMUG00000001844	PPARGC1A	96	70.661	Macaca_mulatta
ENSXCOG00000004835	ppargc1a	95	79.268	ENSMNEG00000028682	PPARGC1A	50	79.518	Macaca_nemestrina
ENSXCOG00000004835	ppargc1a	95	79.268	ENSMLEG00000034233	PPARGC1A	50	79.518	Mandrillus_leucophaeus
ENSXCOG00000004835	ppargc1a	100	76.569	ENSMAMG00000005531	ppargc1a	100	77.615	Mastacembelus_armatus
ENSXCOG00000004835	ppargc1a	97	94.406	ENSMZEG00005001739	ppargc1a	68	95.436	Maylandia_zebra
ENSXCOG00000004835	ppargc1a	100	50.437	ENSMGAG00000012485	PPARGC1A	100	51.982	Meleagris_gallopavo
ENSXCOG00000004835	ppargc1a	95	77.439	ENSMAUG00000011811	Ppargc1a	50	77.711	Mesocricetus_auratus
ENSXCOG00000004835	ppargc1a	95	79.268	ENSMICG00000015390	PPARGC1A	50	79.518	Microcebus_murinus
ENSXCOG00000004835	ppargc1a	95	77.439	ENSMOCG00000008765	Ppargc1a	50	77.711	Microtus_ochrogaster
ENSXCOG00000004835	ppargc1a	100	78.227	ENSMMOG00000011847	ppargc1a	100	78.227	Mola_mola
ENSXCOG00000004835	ppargc1a	95	79.878	ENSMODG00000000549	PPARGC1A	82	80.120	Monodelphis_domestica
ENSXCOG00000004835	ppargc1a	96	93.145	ENSMALG00000004625	ppargc1a	89	93.776	Monopterus_albus
ENSXCOG00000004835	ppargc1a	95	76.829	MGP_CAROLIEiJ_G0027213	Ppargc1a	50	77.108	Mus_caroli
ENSXCOG00000004835	ppargc1a	95	76.829	ENSMUSG00000029167	Ppargc1a	100	50.989	Mus_musculus
ENSXCOG00000004835	ppargc1a	95	76.220	MGP_SPRETEiJ_G0028208	Ppargc1a	100	51.045	Mus_spretus
ENSXCOG00000004835	ppargc1a	95	79.268	ENSMPUG00000016736	PPARGC1A	100	51.262	Mustela_putorius_furo
ENSXCOG00000004835	ppargc1a	100	52.967	ENSMLUG00000016307	PPARGC1A	50	79.518	Myotis_lucifugus
ENSXCOG00000004835	ppargc1a	96	78.732	ENSNBRG00000023403	ppargc1a	98	95.833	Neolamprologus_brichardi
ENSXCOG00000004835	ppargc1a	81	79.268	ENSNLEG00000016760	PPARGC1A	52	71.368	Nomascus_leucogenys
ENSXCOG00000004835	ppargc1a	100	51.747	ENSOPRG00000012899	PPARGC1A	100	50.823	Ochotona_princeps
ENSXCOG00000004835	ppargc1a	100	72.338	ENSONIG00000007635	ppargc1a	100	72.448	Oreochromis_niloticus
ENSXCOG00000004835	ppargc1a	100	52.245	ENSOANG00000006680	PPARGC1A	100	52.707	Ornithorhynchus_anatinus
ENSXCOG00000004835	ppargc1a	100	52.188	ENSOCUG00000014668	PPARGC1A	63	70.259	Oryctolagus_cuniculus
ENSXCOG00000004835	ppargc1a	95	94.758	ENSORLG00000004788	ppargc1a	98	95.417	Oryzias_latipes
ENSXCOG00000004835	ppargc1a	97	92.833	ENSORLG00020014690	ppargc1a	99	84.464	Oryzias_latipes_hni
ENSXCOG00000004835	ppargc1a	97	92.491	ENSORLG00015012206	ppargc1a	99	97.368	Oryzias_latipes_hsok
ENSXCOG00000004835	ppargc1a	100	78.867	ENSOMEG00000000670	ppargc1a	98	95.000	Oryzias_melastigma
ENSXCOG00000004835	ppargc1a	100	51.407	ENSOGAG00000014559	PPARGC1A	50	78.313	Otolemur_garnettii
ENSXCOG00000004835	ppargc1a	95	78.788	ENSOARG00000005581	PPARGC1A	97	51.815	Ovis_aries
ENSXCOG00000004835	ppargc1a	95	79.268	ENSPPAG00000034694	PPARGC1A	50	79.518	Pan_paniscus
ENSXCOG00000004835	ppargc1a	100	52.580	ENSPPRG00000001711	PPARGC1A	100	51.206	Panthera_pardus
ENSXCOG00000004835	ppargc1a	100	52.580	ENSPTIG00000007378	PPARGC1A	100	51.206	Panthera_tigris_altaica
ENSXCOG00000004835	ppargc1a	95	79.268	ENSPTRG00000015954	PPARGC1A	50	79.518	Pan_troglodytes
ENSXCOG00000004835	ppargc1a	95	79.268	ENSPANG00000005420	PPARGC1A	50	79.518	Papio_anubis
ENSXCOG00000004835	ppargc1a	93	69.835	ENSPKIG00000002531	ppargc1a	70	70.800	Paramormyrops_kingsleyae
ENSXCOG00000004835	ppargc1a	95	80.120	ENSPSIG00000011790	PPARGC1A	82	80.120	Pelodiscus_sinensis
ENSXCOG00000004835	ppargc1a	100	71.477	ENSPMGG00000019204	ppargc1a	100	69.073	Periophthalmus_magnuspinnatus
ENSXCOG00000004835	ppargc1a	95	76.970	ENSPEMG00000010892	Ppargc1a	100	50.656	Peromyscus_maniculatus_bairdii
ENSXCOG00000004835	ppargc1a	100	52.402	ENSPCIG00000015835	PPARGC1A	100	51.713	Phascolarctos_cinereus
ENSXCOG00000004835	ppargc1a	100	92.374	ENSPFOG00000001263	ppargc1a	100	92.266	Poecilia_formosa
ENSXCOG00000004835	ppargc1a	100	80.825	ENSPLAG00000002827	ppargc1a	98	99.585	Poecilia_latipinna
ENSXCOG00000004835	ppargc1a	94	99.167	ENSPMEG00000000720	ppargc1a	100	90.880	Poecilia_mexicana
ENSXCOG00000004835	ppargc1a	94	99.585	ENSPREG00000019171	ppargc1a	98	99.583	Poecilia_reticulata
ENSXCOG00000004835	ppargc1a	95	79.268	ENSPPYG00000014640	PPARGC1A	50	79.518	Pongo_abelii
ENSXCOG00000004835	ppargc1a	100	52.308	ENSPCAG00000016308	PPARGC1A	67	47.664	Procavia_capensis
ENSXCOG00000004835	ppargc1a	50	41.546	ENSPCOG00000024059	PPARGC1B	57	47.541	Propithecus_coquereli
ENSXCOG00000004835	ppargc1a	100	52.448	ENSPCOG00000022858	PPARGC1A	50	79.518	Propithecus_coquereli
ENSXCOG00000004835	ppargc1a	95	78.049	ENSPVAG00000004965	PPARGC1A	100	51.372	Pteropus_vampyrus
ENSXCOG00000004835	ppargc1a	97	94.755	ENSPNYG00000006846	ppargc1a	98	95.833	Pundamilia_nyererei
ENSXCOG00000004835	ppargc1a	93	96.053	ENSPNAG00000010393	ppargc1a	90	87.349	Pygocentrus_nattereri
ENSXCOG00000004835	ppargc1a	95	76.220	ENSRNOG00000004473	Ppargc1a	50	76.506	Rattus_norvegicus
ENSXCOG00000004835	ppargc1a	95	79.268	ENSRBIG00000032333	PPARGC1A	100	51.260	Rhinopithecus_bieti
ENSXCOG00000004835	ppargc1a	95	79.268	ENSRROG00000010419	PPARGC1A	100	51.369	Rhinopithecus_roxellana
ENSXCOG00000004835	ppargc1a	95	79.268	ENSSBOG00000006423	PPARGC1A	50	79.518	Saimiri_boliviensis_boliviensis
ENSXCOG00000004835	ppargc1a	100	52.017	ENSSHAG00000010033	PPARGC1A	96	51.705	Sarcophilus_harrisii
ENSXCOG00000004835	ppargc1a	92	75.221	ENSSFOG00015001633	ppargc1a	84	72.269	Scleropages_formosus
ENSXCOG00000004835	ppargc1a	95	92.742	ENSSMAG00000011571	ppargc1a	98	95.614	Scophthalmus_maximus
ENSXCOG00000004835	ppargc1a	100	72.429	ENSSDUG00000007408	ppargc1a	99	96.970	Seriola_dumerili
ENSXCOG00000004835	ppargc1a	100	80.719	ENSSLDG00000006987	ppargc1a	100	80.174	Seriola_lalandi_dorsalis
ENSXCOG00000004835	ppargc1a	91	76.000	ENSSARG00000000575	PPARGC1A	77	76.000	Sorex_araneus
ENSXCOG00000004835	ppargc1a	100	51.475	ENSSPUG00000013556	PPARGC1A	82	80.723	Sphenodon_punctatus
ENSXCOG00000004835	ppargc1a	93	95.279	ENSSPAG00000023514	ppargc1a	98	96.250	Stegastes_partitus
ENSXCOG00000004835	ppargc1a	94	79.268	ENSSSCG00000029275	PPARGC1A	50	79.518	Sus_scrofa
ENSXCOG00000004835	ppargc1a	100	51.479	ENSTGUG00000009487	PPARGC1A	100	46.440	Taeniopygia_guttata
ENSXCOG00000004835	ppargc1a	91	75.398	ENSTRUG00000007210	ppargc1a	92	76.010	Takifugu_rubripes
ENSXCOG00000004835	ppargc1a	100	51.694	ENSTTRG00000005327	PPARGC1A	100	48.475	Tursiops_truncatus
ENSXCOG00000004835	ppargc1a	67	56.489	ENSTTRG00000008430	PPARGC1B	63	38.725	Tursiops_truncatus
ENSXCOG00000004835	ppargc1a	89	78.528	ENSUAMG00000020843	PPARGC1A	99	46.369	Ursus_americanus
ENSXCOG00000004835	ppargc1a	93	79.268	ENSUMAG00000003557	PPARGC1A	99	51.173	Ursus_maritimus
ENSXCOG00000004835	ppargc1a	87	78.788	ENSVPAG00000003478	PPARGC1A	100	45.714	Vicugna_pacos
ENSXCOG00000004835	ppargc1a	95	79.268	ENSVVUG00000013365	PPARGC1A	100	51.313	Vulpes_vulpes
ENSXCOG00000004835	ppargc1a	100	49.890	ENSXETG00000020468	ppargc1a	54	73.973	Xenopus_tropicalis
ENSXCOG00000004835	ppargc1a	99	99.658	ENSXMAG00000007748	ppargc1a	74	99.658	Xiphophorus_maculatus