EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000004854 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 3569 bases
Position: chrKQ557211.1:3672848-3676416
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000006278	ResIII	PF04851.15	7.8e-20	1	1
ENSXCOP00000006278	DEAD	PF00270.29	1.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000006353	-	963	-	ENSXCOP00000006278	320 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000004854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000004854's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000004854	-	84	91.379	ENSAPOG00000014274	-	61	91.379	Acanthochromis_polyacanthus
ENSXCOG00000004854	-	78	81.600	ENSAOCG00000005964	-	96	81.600	Amphiprion_ocellaris
ENSXCOG00000004854	-	78	82.000	ENSAPEG00000018344	-	96	82.000	Amphiprion_percula
ENSXCOG00000004854	-	88	60.952	ENSBTAG00000002612	FANCM	84	60.952	Bos_taurus
ENSXCOG00000004854	-	81	59.231	ENSCING00000002994	-	93	59.231	Ciona_intestinalis
ENSXCOG00000004854	-	82	70.189	ENSDARG00000112136	CABZ01079748.1	86	70.189	Danio_rerio
ENSXCOG00000004854	-	87	56.748	ENSEBUG00000014849	-	88	54.839	Eptatretus_burgeri
ENSXCOG00000004854	-	88	89.189	ENSFHEG00000006371	-	78	89.189	Fundulus_heteroclitus
ENSXCOG00000004854	-	88	91.667	ENSGAFG00000002104	-	96	92.000	Gambusia_affinis
ENSXCOG00000004854	-	91	55.077	ENSGAGG00000007068	-	83	55.385	Gopherus_agassizii
ENSXCOG00000004854	-	76	79.012	ENSIPUG00000014629	fancm	60	79.012	Ictalurus_punctatus
ENSXCOG00000004854	-	83	91.379	ENSKMAG00000009391	-	63	91.379	Kryptolebias_marmoratus
ENSXCOG00000004854	-	89	84.884	ENSMALG00000013187	-	68	84.884	Monopterus_albus
ENSXCOG00000004854	-	77	81.301	ENSNBRG00000024095	-	97	81.301	Neolamprologus_brichardi
ENSXCOG00000004854	-	73	84.483	ENSPKIG00000000861	-	53	84.483	Paramormyrops_kingsleyae
ENSXCOG00000004854	-	77	83.806	ENSPMGG00000010830	-	97	83.806	Periophthalmus_magnuspinnatus
ENSXCOG00000004854	-	63	64.179	ENSPMAG00000003340	-	71	64.179	Petromyzon_marinus
ENSXCOG00000004854	-	93	54.252	ENSPCIG00000005354	-	51	54.252	Phascolarctos_cinereus
ENSXCOG00000004854	-	77	80.894	ENSPNYG00000018775	-	97	80.894	Pundamilia_nyererei
ENSXCOG00000004854	-	77	78.455	ENSSFOG00015017948	-	97	78.455	Scleropages_formosus
ENSXCOG00000004854	-	85	88.703	ENSSMAG00000019903	-	66	88.703	Scophthalmus_maximus
ENSXCOG00000004854	-	91	83.521	ENSSDUG00000016682	-	82	79.866	Seriola_dumerili
ENSXCOG00000004854	-	87	91.810	ENSSPAG00000016930	-	90	81.944	Stegastes_partitus
ENSXCOG00000004854	-	88	64.667	ENSXETG00000003046	fancm	65	65.000	Xenopus_tropicalis