EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000004883 (Gene tree)
Gene ID: -
Gene Symbol: larp7
Alias: fa10g04|wu:fa10g04|zgc:56476
Full Name: La ribonucleoprotein domain family%2C member 7
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 6133 bases
Position: chrKQ557206.1:16119847-16125979
Accession: ZDB-GENE-030131-6896
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000006318	RRM_1	PF00076.22	9.6e-22	1	1
ENSXCOP00000006321	RRM_1	PF00076.22	6.6e-19	1	1
ENSXCOP00000006318	RRM_3	PF08777.11	8e-30	1	1
ENSXCOP00000006321	La	PF05383.17	2.2e-21	1	1
ENSXCOP00000006318	La	PF05383.17	6.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000006398	-	657	-	ENSXCOP00000006321	218 (aa)	-	-
ENSXCOT00000006395	-	1632	-	ENSXCOP00000006318	543 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000004883's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000004883's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000004883	larp7	67	31.613	ENSXCOG00000019109	ssb	73	35.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000004883	larp7	84	72.131	ENSG00000174720	LARP7	99	60.169	Homo_sapiens
ENSXCOG00000004883	larp7	99	81.395	ENSAPOG00000014570	larp7	98	74.414	Acanthochromis_polyacanthus
ENSXCOG00000004883	larp7	84	72.678	ENSAMEG00000015642	LARP7	97	54.093	Ailuropoda_melanoleuca
ENSXCOG00000004883	larp7	99	81.106	ENSACIG00000023850	larp7	98	74.393	Amphilophus_citrinellus
ENSXCOG00000004883	larp7	99	82.326	ENSAOCG00000016160	larp7	98	76.396	Amphiprion_ocellaris
ENSXCOG00000004883	larp7	99	82.326	ENSAPEG00000021823	larp7	98	76.216	Amphiprion_percula
ENSXCOG00000004883	larp7	99	80.000	ENSATEG00000016238	larp7	99	73.393	Anabas_testudineus
ENSXCOG00000004883	larp7	83	74.176	ENSAPLG00000012887	LARP7	97	51.712	Anas_platyrhynchos
ENSXCOG00000004883	larp7	83	72.527	ENSACAG00000010662	LARP7	93	52.439	Anolis_carolinensis
ENSXCOG00000004883	larp7	94	42.754	ENSANAG00000022318	-	97	42.984	Aotus_nancymaae
ENSXCOG00000004883	larp7	84	72.131	ENSANAG00000031139	-	97	53.263	Aotus_nancymaae
ENSXCOG00000004883	larp7	99	79.263	ENSACLG00000023184	larp7	98	73.201	Astatotilapia_calliptera
ENSXCOG00000004883	larp7	94	69.118	ENSAMXG00000002549	larp7	98	58.036	Astyanax_mexicanus
ENSXCOG00000004883	larp7	84	72.131	ENSBTAG00000009632	LARP7	98	52.465	Bos_taurus
ENSXCOG00000004883	larp7	84	72.131	ENSCJAG00000003711	LARP7	97	54.417	Callithrix_jacchus
ENSXCOG00000004883	larp7	84	72.283	ENSCAFG00000011715	LARP7	97	52.548	Canis_familiaris
ENSXCOG00000004883	larp7	84	72.283	ENSCAFG00020017225	LARP7	97	53.274	Canis_lupus_dingo
ENSXCOG00000004883	larp7	84	72.131	ENSCHIG00000014163	-	96	55.277	Capra_hircus
ENSXCOG00000004883	larp7	94	64.078	ENSCHIG00000013971	-	96	51.167	Capra_hircus
ENSXCOG00000004883	larp7	83	62.983	ENSTSYG00000035188	-	98	50.558	Carlito_syrichta
ENSXCOG00000004883	larp7	84	72.678	ENSTSYG00000006769	-	97	53.510	Carlito_syrichta
ENSXCOG00000004883	larp7	94	48.513	ENSCAPG00000009328	LARP7	97	48.634	Cavia_aperea
ENSXCOG00000004883	larp7	84	72.131	ENSCCAG00000026787	-	97	54.336	Cebus_capucinus
ENSXCOG00000004883	larp7	83	66.111	ENSCCAG00000023563	-	99	49.531	Cebus_capucinus
ENSXCOG00000004883	larp7	84	72.131	ENSCATG00000043535	LARP7	97	54.610	Cercocebus_atys
ENSXCOG00000004883	larp7	84	72.678	ENSCLAG00000005894	LARP7	97	55.877	Chinchilla_lanigera
ENSXCOG00000004883	larp7	84	72.131	ENSCSAG00000003810	LARP7	97	54.787	Chlorocebus_sabaeus
ENSXCOG00000004883	larp7	84	72.678	ENSCHOG00000002379	-	97	53.571	Choloepus_hoffmanni
ENSXCOG00000004883	larp7	77	64.072	ENSCHOG00000008967	-	99	47.486	Choloepus_hoffmanni
ENSXCOG00000004883	larp7	83	71.978	ENSCPBG00000004919	LARP7	98	54.167	Chrysemys_picta_bellii
ENSXCOG00000004883	larp7	84	72.131	ENSCANG00000031482	LARP7	96	54.867	Colobus_angolensis_palliatus
ENSXCOG00000004883	larp7	83	72.778	ENSCGRG00001025050	-	98	53.982	Cricetulus_griseus_chok1gshd
ENSXCOG00000004883	larp7	84	68.852	ENSCGRG00001012747	-	96	47.959	Cricetulus_griseus_chok1gshd
ENSXCOG00000004883	larp7	84	68.852	ENSCGRG00000007642	-	95	50.570	Cricetulus_griseus_crigri
ENSXCOG00000004883	larp7	83	72.778	ENSCGRG00000001141	-	98	50.000	Cricetulus_griseus_crigri
ENSXCOG00000004883	larp7	99	75.814	ENSCSEG00000009088	larp7	97	68.603	Cynoglossus_semilaevis
ENSXCOG00000004883	larp7	97	92.453	ENSCVAG00000016852	larp7	92	92.453	Cyprinodon_variegatus
ENSXCOG00000004883	larp7	92	71.782	ENSDARG00000017315	larp7	97	57.196	Danio_rerio
ENSXCOG00000004883	larp7	96	67.943	ENSDNOG00000013761	LARP7	98	54.181	Dasypus_novemcinctus
ENSXCOG00000004883	larp7	84	73.224	ENSDORG00000008896	-	97	55.080	Dipodomys_ordii
ENSXCOG00000004883	larp7	84	72.678	ENSETEG00000011692	LARP7	97	53.846	Echinops_telfairi
ENSXCOG00000004883	larp7	95	52.632	ENSEBUG00000013808	larp7	96	39.007	Eptatretus_burgeri
ENSXCOG00000004883	larp7	84	72.131	ENSEASG00005005592	LARP7	97	54.078	Equus_asinus_asinus
ENSXCOG00000004883	larp7	84	72.131	ENSECAG00000000834	LARP7	97	54.078	Equus_caballus
ENSXCOG00000004883	larp7	84	72.678	ENSEEUG00000012824	LARP7	97	56.000	Erinaceus_europaeus
ENSXCOG00000004883	larp7	96	74.408	ENSELUG00000015341	larp7	96	77.157	Esox_lucius
ENSXCOG00000004883	larp7	84	72.826	ENSFCAG00000031966	LARP7	96	54.448	Felis_catus
ENSXCOG00000004883	larp7	83	74.725	ENSFALG00000000972	LARP7	95	52.622	Ficedula_albicollis
ENSXCOG00000004883	larp7	84	64.481	ENSFDAG00000011855	-	97	50.717	Fukomys_damarensis
ENSXCOG00000004883	larp7	84	72.131	ENSFDAG00000014048	-	98	54.367	Fukomys_damarensis
ENSXCOG00000004883	larp7	99	90.783	ENSFHEG00000021652	larp7	98	82.878	Fundulus_heteroclitus
ENSXCOG00000004883	larp7	90	67.980	ENSGMOG00000010536	larp7	97	57.923	Gadus_morhua
ENSXCOG00000004883	larp7	83	73.626	ENSGALG00000012048	LARP7	97	51.384	Gallus_gallus
ENSXCOG00000004883	larp7	99	97.696	ENSGAFG00000015400	larp7	98	92.405	Gambusia_affinis
ENSXCOG00000004883	larp7	99	74.419	ENSGACG00000019618	larp7	93	74.419	Gasterosteus_aculeatus
ENSXCOG00000004883	larp7	83	71.978	ENSGAGG00000024520	LARP7	96	53.310	Gopherus_agassizii
ENSXCOG00000004883	larp7	67	73.288	ENSGGOG00000006438	-	95	53.252	Gorilla_gorilla
ENSXCOG00000004883	larp7	84	72.131	ENSGGOG00000023567	-	97	54.610	Gorilla_gorilla
ENSXCOG00000004883	larp7	99	79.263	ENSHBUG00000019223	larp7	98	73.381	Haplochromis_burtoni
ENSXCOG00000004883	larp7	84	71.585	ENSHGLG00000002716	LARP7	98	53.065	Heterocephalus_glaber_female
ENSXCOG00000004883	larp7	84	71.585	ENSHGLG00100000332	LARP7	98	53.065	Heterocephalus_glaber_male
ENSXCOG00000004883	larp7	97	78.199	ENSHCOG00000000664	LARP7	97	67.167	Hippocampus_comes
ENSXCOG00000004883	larp7	93	75.862	ENSIPUG00000019886	larp7	99	58.478	Ictalurus_punctatus
ENSXCOG00000004883	larp7	84	72.678	ENSSTOG00000011789	LARP7	97	55.516	Ictidomys_tridecemlineatus
ENSXCOG00000004883	larp7	84	72.678	ENSJJAG00000000257	-	98	54.401	Jaculus_jaculus
ENSXCOG00000004883	larp7	98	83.099	ENSKMAG00000005057	larp7	100	69.805	Kryptolebias_marmoratus
ENSXCOG00000004883	larp7	93	77.941	ENSLBEG00000018789	-	89	77.941	Labrus_bergylta
ENSXCOG00000004883	larp7	93	76.847	ENSLBEG00000020062	larp7	97	68.984	Labrus_bergylta
ENSXCOG00000004883	larp7	88	59.896	ENSLACG00000013744	LARP7	96	49.400	Latimeria_chalumnae
ENSXCOG00000004883	larp7	94	49.053	ENSLOCG00000011608	larp7	97	49.322	Lepisosteus_oculatus
ENSXCOG00000004883	larp7	84	72.678	ENSLAFG00000015769	LARP7	97	54.787	Loxodonta_africana
ENSXCOG00000004883	larp7	84	72.131	ENSMFAG00000036506	LARP7	97	54.965	Macaca_fascicularis
ENSXCOG00000004883	larp7	84	72.131	ENSMMUG00000017911	LARP7	97	54.965	Macaca_mulatta
ENSXCOG00000004883	larp7	84	72.131	ENSMNEG00000034758	LARP7	99	53.892	Macaca_nemestrina
ENSXCOG00000004883	larp7	84	72.131	ENSMLEG00000026154	LARP7	97	54.787	Mandrillus_leucophaeus
ENSXCOG00000004883	larp7	99	78.140	ENSMAMG00000005835	larp7	98	71.505	Mastacembelus_armatus
ENSXCOG00000004883	larp7	99	79.263	ENSMZEG00005002084	larp7	98	73.201	Maylandia_zebra
ENSXCOG00000004883	larp7	83	73.626	ENSMGAG00000010947	LARP7	97	53.509	Meleagris_gallopavo
ENSXCOG00000004883	larp7	83	73.333	ENSMAUG00000005625	-	97	47.387	Mesocricetus_auratus
ENSXCOG00000004883	larp7	84	72.678	ENSMICG00000031035	LARP7	97	54.804	Microcebus_murinus
ENSXCOG00000004883	larp7	83	72.778	ENSMOCG00000012519	-	98	54.545	Microtus_ochrogaster
ENSXCOG00000004883	larp7	88	52.174	ENSMOCG00000015761	-	100	52.250	Microtus_ochrogaster
ENSXCOG00000004883	larp7	99	77.419	ENSMMOG00000011816	larp7	89	77.419	Mola_mola
ENSXCOG00000004883	larp7	84	73.224	ENSMODG00000005669	LARP7	97	54.530	Monodelphis_domestica
ENSXCOG00000004883	larp7	90	84.264	ENSMALG00000009893	larp7	85	84.264	Monopterus_albus
ENSXCOG00000004883	larp7	83	72.222	MGP_CAROLIEiJ_G0025613	-	87	59.375	Mus_caroli
ENSXCOG00000004883	larp7	83	72.222	ENSMUSG00000027968	Larp7	100	56.471	Mus_musculus
ENSXCOG00000004883	larp7	83	72.222	MGP_PahariEiJ_G0027060	-	98	53.405	Mus_pahari
ENSXCOG00000004883	larp7	83	72.778	MGP_SPRETEiJ_G0026566	Larp7	98	54.724	Mus_spretus
ENSXCOG00000004883	larp7	84	73.224	ENSMPUG00000008331	-	97	54.707	Mustela_putorius_furo
ENSXCOG00000004883	larp7	83	71.667	ENSMPUG00000018052	-	100	54.563	Mustela_putorius_furo
ENSXCOG00000004883	larp7	84	51.896	ENSMLUG00000027214	LARP7	99	53.000	Myotis_lucifugus
ENSXCOG00000004883	larp7	100	79.817	ENSNBRG00000007968	larp7	87	79.817	Neolamprologus_brichardi
ENSXCOG00000004883	larp7	84	72.131	ENSNLEG00000016354	LARP7	95	55.098	Nomascus_leucogenys
ENSXCOG00000004883	larp7	74	73.913	ENSMEUG00000004739	LARP7	100	53.571	Notamacropus_eugenii
ENSXCOG00000004883	larp7	84	64.122	ENSOPRG00000009594	-	85	64.122	Ochotona_princeps
ENSXCOG00000004883	larp7	84	72.678	ENSODEG00000011121	LARP7	96	54.444	Octodon_degus
ENSXCOG00000004883	larp7	88	84.817	ENSONIG00000008763	larp7	98	73.561	Oreochromis_niloticus
ENSXCOG00000004883	larp7	83	72.527	ENSOANG00000009298	LARP7	96	53.103	Ornithorhynchus_anatinus
ENSXCOG00000004883	larp7	84	72.678	ENSOCUG00000007073	LARP7	97	53.915	Oryctolagus_cuniculus
ENSXCOG00000004883	larp7	84	84.153	ENSORLG00000004978	larp7	98	70.336	Oryzias_latipes
ENSXCOG00000004883	larp7	84	84.153	ENSORLG00020013825	larp7	98	70.391	Oryzias_latipes_hni
ENSXCOG00000004883	larp7	84	84.153	ENSORLG00015011435	larp7	87	80.861	Oryzias_latipes_hsok
ENSXCOG00000004883	larp7	95	81.250	ENSOMEG00000006920	larp7	98	71.058	Oryzias_melastigma
ENSXCOG00000004883	larp7	84	72.678	ENSOGAG00000001643	LARP7	97	53.860	Otolemur_garnettii
ENSXCOG00000004883	larp7	84	72.131	ENSOARG00000001809	LARP7	96	54.626	Ovis_aries
ENSXCOG00000004883	larp7	84	72.131	ENSPPAG00000038420	LARP7	96	54.529	Pan_paniscus
ENSXCOG00000004883	larp7	84	72.826	ENSPPRG00000023256	LARP7	96	54.174	Panthera_pardus
ENSXCOG00000004883	larp7	84	72.826	ENSPTIG00000021146	LARP7	93	53.974	Panthera_tigris_altaica
ENSXCOG00000004883	larp7	84	72.131	ENSPTRG00000016380	LARP7	97	54.433	Pan_troglodytes
ENSXCOG00000004883	larp7	84	72.131	ENSPANG00000006701	LARP7	96	54.690	Papio_anubis
ENSXCOG00000004883	larp7	95	75.962	ENSPKIG00000023484	larp7	100	61.644	Paramormyrops_kingsleyae
ENSXCOG00000004883	larp7	89	69.588	ENSPSIG00000014419	LARP7	96	52.197	Pelodiscus_sinensis
ENSXCOG00000004883	larp7	86	80.319	ENSPMGG00000019887	larp7	91	80.402	Periophthalmus_magnuspinnatus
ENSXCOG00000004883	larp7	83	73.333	ENSPEMG00000013978	-	98	52.705	Peromyscus_maniculatus_bairdii
ENSXCOG00000004883	larp7	89	51.031	ENSPMAG00000005362	larp7	95	36.477	Petromyzon_marinus
ENSXCOG00000004883	larp7	84	73.224	ENSPCIG00000020284	LARP7	96	61.739	Phascolarctos_cinereus
ENSXCOG00000004883	larp7	99	95.392	ENSPFOG00000000265	larp7	98	90.164	Poecilia_formosa
ENSXCOG00000004883	larp7	99	95.853	ENSPLAG00000012181	larp7	98	90.346	Poecilia_latipinna
ENSXCOG00000004883	larp7	99	95.853	ENSPMEG00000007182	larp7	98	90.346	Poecilia_mexicana
ENSXCOG00000004883	larp7	99	95.392	ENSPREG00000019513	larp7	98	90.018	Poecilia_reticulata
ENSXCOG00000004883	larp7	84	72.131	ENSPPYG00000015010	LARP7	97	54.433	Pongo_abelii
ENSXCOG00000004883	larp7	84	72.678	ENSPCOG00000023946	LARP7	86	71.429	Propithecus_coquereli
ENSXCOG00000004883	larp7	94	67.633	ENSPVAG00000000282	LARP7	98	53.779	Pteropus_vampyrus
ENSXCOG00000004883	larp7	100	79.358	ENSPNYG00000023801	larp7	87	79.358	Pundamilia_nyererei
ENSXCOG00000004883	larp7	84	75.543	ENSPNAG00000017554	larp7	99	60.000	Pygocentrus_nattereri
ENSXCOG00000004883	larp7	83	72.778	ENSRNOG00000048989	Larp7	98	52.827	Rattus_norvegicus
ENSXCOG00000004883	larp7	84	72.131	ENSRBIG00000031916	LARP7	95	51.754	Rhinopithecus_bieti
ENSXCOG00000004883	larp7	84	72.131	ENSRROG00000033414	LARP7	97	54.610	Rhinopithecus_roxellana
ENSXCOG00000004883	larp7	98	43.376	ENSSBOG00000022652	-	99	43.297	Saimiri_boliviensis_boliviensis
ENSXCOG00000004883	larp7	84	72.131	ENSSBOG00000030886	-	97	54.513	Saimiri_boliviensis_boliviensis
ENSXCOG00000004883	larp7	84	73.224	ENSSHAG00000008153	LARP7	96	54.657	Sarcophilus_harrisii
ENSXCOG00000004883	larp7	94	75.610	ENSSFOG00015019344	larp7	96	62.340	Scleropages_formosus
ENSXCOG00000004883	larp7	97	80.374	ENSSMAG00000011296	larp7	98	73.007	Scophthalmus_maximus
ENSXCOG00000004883	larp7	96	83.732	ENSSDUG00000007045	larp7	98	75.000	Seriola_dumerili
ENSXCOG00000004883	larp7	99	80.930	ENSSLDG00000005128	larp7	97	80.930	Seriola_lalandi_dorsalis
ENSXCOG00000004883	larp7	99	80.930	ENSSPAG00000016066	larp7	98	73.345	Stegastes_partitus
ENSXCOG00000004883	larp7	84	72.678	ENSSSCG00000009119	LARP7	97	53.628	Sus_scrofa
ENSXCOG00000004883	larp7	83	74.725	ENSTGUG00000001804	LARP7	97	53.054	Taeniopygia_guttata
ENSXCOG00000004883	larp7	93	73.529	ENSTRUG00000004996	larp7	98	62.949	Takifugu_rubripes
ENSXCOG00000004883	larp7	85	73.514	ENSTNIG00000007183	larp7	97	59.815	Tetraodon_nigroviridis
ENSXCOG00000004883	larp7	84	71.585	ENSTBEG00000009188	LARP7	96	53.237	Tupaia_belangeri
ENSXCOG00000004883	larp7	68	74.324	ENSTTRG00000005233	LARP7	99	51.644	Tursiops_truncatus
ENSXCOG00000004883	larp7	84	73.224	ENSUAMG00000000836	LARP7	97	54.529	Ursus_americanus
ENSXCOG00000004883	larp7	84	73.224	ENSUMAG00000002263	LARP7	96	53.860	Ursus_maritimus
ENSXCOG00000004883	larp7	84	72.678	ENSVPAG00000010502	LARP7	97	54.352	Vicugna_pacos
ENSXCOG00000004883	larp7	84	72.283	ENSVVUG00000002274	LARP7	97	53.451	Vulpes_vulpes
ENSXCOG00000004883	larp7	91	70.707	ENSXETG00000024097	larp7	96	53.846	Xenopus_tropicalis
ENSXCOG00000004883	larp7	99	99.078	ENSXMAG00000008479	larp7	98	94.394	Xiphophorus_maculatus