EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000005020 (Gene tree)
Gene ID: -
Gene Symbol: aptx
Alias: FHA-HIT
Full Name: aprataxin
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 2434 bases
Position: chrKQ557220.1:14796333-14798766
Accession: ZDB-GENE-040628-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000006485	DcpS_C	PF11969.8	5.2e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000006565	-	1056	-	ENSXCOP00000006485	351 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000005020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000005020's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000005020	aptx	99	57.345	ENSG00000137074	APTX	94	69.832	Homo_sapiens
ENSXCOG00000005020	aptx	100	75.499	ENSAPOG00000008785	aptx	100	75.499	Acanthochromis_polyacanthus
ENSXCOG00000005020	aptx	100	57.022	ENSAMEG00000007648	APTX	96	57.022	Ailuropoda_melanoleuca
ENSXCOG00000005020	aptx	100	69.801	ENSACIG00000002035	aptx	100	69.801	Amphilophus_citrinellus
ENSXCOG00000005020	aptx	100	76.353	ENSAOCG00000000634	aptx	100	76.353	Amphiprion_ocellaris
ENSXCOG00000005020	aptx	100	76.353	ENSAPEG00000017253	aptx	100	76.353	Amphiprion_percula
ENSXCOG00000005020	aptx	100	75.783	ENSATEG00000017383	aptx	100	75.783	Anabas_testudineus
ENSXCOG00000005020	aptx	91	53.153	ENSAPLG00000015645	APTX	100	53.153	Anas_platyrhynchos
ENSXCOG00000005020	aptx	100	56.410	ENSACAG00000003581	APTX	95	56.461	Anolis_carolinensis
ENSXCOG00000005020	aptx	99	57.345	ENSANAG00000030160	APTX	96	57.313	Aotus_nancymaae
ENSXCOG00000005020	aptx	99	75.358	ENSACLG00000018887	aptx	100	75.358	Astatotilapia_calliptera
ENSXCOG00000005020	aptx	99	64.470	ENSAMXG00000039899	aptx	99	64.470	Astyanax_mexicanus
ENSXCOG00000005020	aptx	100	56.022	ENSBTAG00000013947	APTX	98	56.022	Bos_taurus
ENSXCOG00000005020	aptx	99	56.497	ENSCJAG00000007940	APTX	99	56.497	Callithrix_jacchus
ENSXCOG00000005020	aptx	100	56.461	ENSCAFG00000001812	APTX	99	56.461	Canis_familiaris
ENSXCOG00000005020	aptx	100	56.461	ENSCAFG00020015598	APTX	99	56.461	Canis_lupus_dingo
ENSXCOG00000005020	aptx	100	56.091	ENSCHIG00000012896	APTX	99	56.091	Capra_hircus
ENSXCOG00000005020	aptx	100	55.618	ENSTSYG00000003041	APTX	94	66.851	Carlito_syrichta
ENSXCOG00000005020	aptx	62	64.607	ENSCAPG00000013470	APTX	100	64.607	Cavia_aperea
ENSXCOG00000005020	aptx	100	55.899	ENSCPOG00000005975	APTX	100	69.613	Cavia_porcellus
ENSXCOG00000005020	aptx	99	56.497	ENSCCAG00000036783	APTX	99	56.497	Cebus_capucinus
ENSXCOG00000005020	aptx	99	57.465	ENSCATG00000042639	APTX	96	57.465	Cercocebus_atys
ENSXCOG00000005020	aptx	100	57.542	ENSCLAG00000012185	APTX	100	66.500	Chinchilla_lanigera
ENSXCOG00000005020	aptx	99	56.780	ENSCSAG00000009885	APTX	95	56.780	Chlorocebus_sabaeus
ENSXCOG00000005020	aptx	100	58.640	ENSCPBG00000023973	APTX	98	57.939	Chrysemys_picta_bellii
ENSXCOG00000005020	aptx	98	40.489	ENSCING00000008741	-	95	40.489	Ciona_intestinalis
ENSXCOG00000005020	aptx	98	40.947	ENSCSAVG00000008038	-	97	40.659	Ciona_savignyi
ENSXCOG00000005020	aptx	99	57.143	ENSCANG00000037253	APTX	99	57.143	Colobus_angolensis_palliatus
ENSXCOG00000005020	aptx	99	57.835	ENSCGRG00001000705	Aptx	98	69.832	Cricetulus_griseus_chok1gshd
ENSXCOG00000005020	aptx	99	57.627	ENSCGRG00000014159	Aptx	98	69.832	Cricetulus_griseus_crigri
ENSXCOG00000005020	aptx	99	68.571	ENSCSEG00000009549	aptx	99	68.571	Cynoglossus_semilaevis
ENSXCOG00000005020	aptx	100	79.202	ENSCVAG00000011942	aptx	99	79.202	Cyprinodon_variegatus
ENSXCOG00000005020	aptx	99	62.571	ENSDARG00000027143	aptx	99	62.817	Danio_rerio
ENSXCOG00000005020	aptx	100	56.461	ENSDNOG00000018498	APTX	96	56.461	Dasypus_novemcinctus
ENSXCOG00000005020	aptx	99	55.367	ENSDORG00000002139	Aptx	99	69.274	Dipodomys_ordii
ENSXCOG00000005020	aptx	56	40.341	FBgn0038704	CG5316	87	44.262	Drosophila_melanogaster
ENSXCOG00000005020	aptx	83	51.525	ENSETEG00000012459	APTX	79	51.525	Echinops_telfairi
ENSXCOG00000005020	aptx	99	47.075	ENSEBUG00000013914	aptx	95	47.075	Eptatretus_burgeri
ENSXCOG00000005020	aptx	100	54.775	ENSEASG00005004566	APTX	99	54.775	Equus_asinus_asinus
ENSXCOG00000005020	aptx	100	55.618	ENSECAG00000012674	APTX	92	55.618	Equus_caballus
ENSXCOG00000005020	aptx	85	57.566	ENSEEUG00000010693	APTX	95	57.566	Erinaceus_europaeus
ENSXCOG00000005020	aptx	100	57.584	ENSFCAG00000008728	APTX	99	57.584	Felis_catus
ENSXCOG00000005020	aptx	100	57.542	ENSFALG00000001230	APTX	100	57.542	Ficedula_albicollis
ENSXCOG00000005020	aptx	99	56.447	ENSFDAG00000013752	APTX	99	65.152	Fukomys_damarensis
ENSXCOG00000005020	aptx	83	83.333	ENSFHEG00000021328	aptx	73	83.333	Fundulus_heteroclitus
ENSXCOG00000005020	aptx	99	68.000	ENSGMOG00000012505	aptx	99	68.000	Gadus_morhua
ENSXCOG00000005020	aptx	100	56.145	ENSGALG00000001954	APTX	100	56.425	Gallus_gallus
ENSXCOG00000005020	aptx	100	92.023	ENSGAFG00000005086	aptx	100	92.023	Gambusia_affinis
ENSXCOG00000005020	aptx	99	69.143	ENSGACG00000017887	aptx	99	69.143	Gasterosteus_aculeatus
ENSXCOG00000005020	aptx	100	57.790	ENSGAGG00000013230	APTX	100	57.103	Gopherus_agassizii
ENSXCOG00000005020	aptx	85	57.566	ENSGGOG00000014232	APTX	94	54.333	Gorilla_gorilla
ENSXCOG00000005020	aptx	99	75.358	ENSHBUG00000021058	aptx	100	75.358	Haplochromis_burtoni
ENSXCOG00000005020	aptx	99	57.143	ENSHGLG00000015093	APTX	99	64.646	Heterocephalus_glaber_female
ENSXCOG00000005020	aptx	99	57.143	ENSHGLG00100013482	APTX	99	64.646	Heterocephalus_glaber_male
ENSXCOG00000005020	aptx	99	67.622	ENSHCOG00000018216	aptx	96	67.622	Hippocampus_comes
ENSXCOG00000005020	aptx	99	62.185	ENSIPUG00000017548	aptx	99	62.185	Ictalurus_punctatus
ENSXCOG00000005020	aptx	89	68.508	ENSSTOG00000005185	APTX	100	68.508	Ictidomys_tridecemlineatus
ENSXCOG00000005020	aptx	99	53.582	ENSJJAG00000015653	Aptx	99	53.582	Jaculus_jaculus
ENSXCOG00000005020	aptx	99	71.920	ENSKMAG00000000117	aptx	99	71.920	Kryptolebias_marmoratus
ENSXCOG00000005020	aptx	99	63.585	ENSLBEG00000021489	APTX	99	63.585	Labrus_bergylta
ENSXCOG00000005020	aptx	99	71.143	ENSLBEG00000015353	aptx	99	71.143	Labrus_bergylta
ENSXCOG00000005020	aptx	100	57.022	ENSLACG00000003376	APTX	100	57.022	Latimeria_chalumnae
ENSXCOG00000005020	aptx	100	61.756	ENSLOCG00000011556	aptx	96	61.756	Lepisosteus_oculatus
ENSXCOG00000005020	aptx	100	56.056	ENSLAFG00000005665	APTX	99	56.056	Loxodonta_africana
ENSXCOG00000005020	aptx	99	57.465	ENSMFAG00000043141	APTX	96	57.465	Macaca_fascicularis
ENSXCOG00000005020	aptx	99	57.465	ENSMMUG00000007724	APTX	96	57.465	Macaca_mulatta
ENSXCOG00000005020	aptx	99	56.734	ENSMNEG00000042341	APTX	99	56.734	Macaca_nemestrina
ENSXCOG00000005020	aptx	99	57.020	ENSMLEG00000035137	APTX	99	57.020	Mandrillus_leucophaeus
ENSXCOG00000005020	aptx	100	73.504	ENSMAMG00000018377	aptx	100	73.504	Mastacembelus_armatus
ENSXCOG00000005020	aptx	99	75.072	ENSMZEG00005022621	aptx	100	75.072	Maylandia_zebra
ENSXCOG00000005020	aptx	52	67.956	ENSMGAG00000005736	APTX	100	67.956	Meleagris_gallopavo
ENSXCOG00000005020	aptx	99	56.196	ENSMAUG00000006039	Aptx	98	69.832	Mesocricetus_auratus
ENSXCOG00000005020	aptx	100	54.768	ENSMICG00000006603	APTX	97	54.768	Microcebus_murinus
ENSXCOG00000005020	aptx	99	55.556	ENSMOCG00000000869	Aptx	99	69.274	Microtus_ochrogaster
ENSXCOG00000005020	aptx	99	71.060	ENSMMOG00000007028	aptx	99	71.060	Mola_mola
ENSXCOG00000005020	aptx	99	55.143	ENSMODG00000003365	APTX	98	55.143	Monodelphis_domestica
ENSXCOG00000005020	aptx	100	63.533	ENSMALG00000003828	aptx	100	63.533	Monopterus_albus
ENSXCOG00000005020	aptx	83	65.152	MGP_CAROLIEiJ_G0025897	-	99	69.832	Mus_caroli
ENSXCOG00000005020	aptx	99	56.000	ENSMUSG00000028411	Aptx	99	69.274	Mus_musculus
ENSXCOG00000005020	aptx	99	55.429	MGP_PahariEiJ_G0024020	Aptx	99	55.429	Mus_pahari
ENSXCOG00000005020	aptx	99	56.000	MGP_SPRETEiJ_G0026846	Aptx	97	56.000	Mus_spretus
ENSXCOG00000005020	aptx	100	56.461	ENSMPUG00000004290	APTX	99	56.461	Mustela_putorius_furo
ENSXCOG00000005020	aptx	100	56.742	ENSMLUG00000016081	APTX	95	56.742	Myotis_lucifugus
ENSXCOG00000005020	aptx	100	55.899	ENSNGAG00000016314	Aptx	100	63.000	Nannospalax_galili
ENSXCOG00000005020	aptx	99	74.499	ENSNBRG00000014199	aptx	100	74.499	Neolamprologus_brichardi
ENSXCOG00000005020	aptx	99	57.062	ENSNLEG00000032184	APTX	99	57.062	Nomascus_leucogenys
ENSXCOG00000005020	aptx	99	52.975	ENSMEUG00000004153	APTX	99	52.975	Notamacropus_eugenii
ENSXCOG00000005020	aptx	85	55.150	ENSOPRG00000012403	APTX	95	55.150	Ochotona_princeps
ENSXCOG00000005020	aptx	100	56.497	ENSODEG00000015832	-	100	69.061	Octodon_degus
ENSXCOG00000005020	aptx	70	69.061	ENSODEG00000000097	-	87	69.061	Octodon_degus
ENSXCOG00000005020	aptx	100	74.929	ENSONIG00000014541	aptx	83	74.929	Oreochromis_niloticus
ENSXCOG00000005020	aptx	85	56.393	ENSOANG00000009878	APTX	98	56.393	Ornithorhynchus_anatinus
ENSXCOG00000005020	aptx	99	55.618	ENSOCUG00000000738	-	98	55.229	Oryctolagus_cuniculus
ENSXCOG00000005020	aptx	78	70.391	ENSOCUG00000025059	-	92	70.391	Oryctolagus_cuniculus
ENSXCOG00000005020	aptx	100	70.655	ENSORLG00000006237	aptx	100	70.655	Oryzias_latipes
ENSXCOG00000005020	aptx	100	71.225	ENSORLG00020021478	aptx	100	71.225	Oryzias_latipes_hni
ENSXCOG00000005020	aptx	100	71.875	ENSORLG00015021873	aptx	100	71.875	Oryzias_latipes_hsok
ENSXCOG00000005020	aptx	99	63.429	ENSOMEG00000007875	aptx	93	63.429	Oryzias_melastigma
ENSXCOG00000005020	aptx	99	55.587	ENSOGAG00000005388	APTX	95	55.587	Otolemur_garnettii
ENSXCOG00000005020	aptx	100	56.125	ENSOARG00000009598	APTX	96	56.125	Ovis_aries
ENSXCOG00000005020	aptx	99	57.062	ENSPPAG00000030295	APTX	96	57.062	Pan_paniscus
ENSXCOG00000005020	aptx	100	57.584	ENSPPRG00000017524	APTX	99	57.584	Panthera_pardus
ENSXCOG00000005020	aptx	100	57.584	ENSPTIG00000020000	APTX	99	57.584	Panthera_tigris_altaica
ENSXCOG00000005020	aptx	99	57.062	ENSPTRG00000020850	APTX	99	57.062	Pan_troglodytes
ENSXCOG00000005020	aptx	99	57.465	ENSPANG00000025301	APTX	96	57.465	Papio_anubis
ENSXCOG00000005020	aptx	100	62.678	ENSPKIG00000013601	aptx	100	62.678	Paramormyrops_kingsleyae
ENSXCOG00000005020	aptx	100	56.125	ENSPSIG00000010521	APTX	95	56.125	Pelodiscus_sinensis
ENSXCOG00000005020	aptx	98	64.470	ENSPMGG00000018649	aptx	99	64.470	Periophthalmus_magnuspinnatus
ENSXCOG00000005020	aptx	99	57.593	ENSPEMG00000007747	Aptx	99	66.162	Peromyscus_maniculatus_bairdii
ENSXCOG00000005020	aptx	99	45.810	ENSPMAG00000008417	aptx	97	45.810	Petromyzon_marinus
ENSXCOG00000005020	aptx	99	58.824	ENSPCIG00000029852	APTX	99	58.824	Phascolarctos_cinereus
ENSXCOG00000005020	aptx	100	89.174	ENSPFOG00000004992	aptx	100	89.174	Poecilia_formosa
ENSXCOG00000005020	aptx	100	89.459	ENSPFOG00000005131	-	99	89.459	Poecilia_formosa
ENSXCOG00000005020	aptx	100	89.459	ENSPLAG00000007960	APTX	100	89.459	Poecilia_latipinna
ENSXCOG00000005020	aptx	100	89.459	ENSPLAG00000007906	aptx	100	89.459	Poecilia_latipinna
ENSXCOG00000005020	aptx	100	89.744	ENSPMEG00000018504	aptx	100	89.744	Poecilia_mexicana
ENSXCOG00000005020	aptx	100	89.459	ENSPMEG00000019789	APTX	100	89.459	Poecilia_mexicana
ENSXCOG00000005020	aptx	100	82.336	ENSPREG00000004375	aptx	100	82.336	Poecilia_reticulata
ENSXCOG00000005020	aptx	99	56.780	ENSPPYG00000019142	APTX	95	56.780	Pongo_abelii
ENSXCOG00000005020	aptx	100	46.742	ENSPCAG00000010014	APTX	99	46.742	Procavia_capensis
ENSXCOG00000005020	aptx	100	56.044	ENSPCOG00000016780	APTX	99	56.044	Propithecus_coquereli
ENSXCOG00000005020	aptx	100	55.618	ENSPVAG00000011468	APTX	96	55.618	Pteropus_vampyrus
ENSXCOG00000005020	aptx	99	75.358	ENSPNYG00000007675	aptx	100	75.358	Pundamilia_nyererei
ENSXCOG00000005020	aptx	99	61.864	ENSPNAG00000015984	aptx	99	61.864	Pygocentrus_nattereri
ENSXCOG00000005020	aptx	99	55.367	ENSRNOG00000006582	Aptx	99	55.367	Rattus_norvegicus
ENSXCOG00000005020	aptx	99	57.143	ENSRBIG00000042913	APTX	99	57.143	Rhinopithecus_bieti
ENSXCOG00000005020	aptx	99	57.143	ENSRROG00000035395	APTX	99	57.143	Rhinopithecus_roxellana
ENSXCOG00000005020	aptx	50	31.905	YOR258W	-	96	32.857	Saccharomyces_cerevisiae
ENSXCOG00000005020	aptx	99	57.183	ENSSBOG00000025215	APTX	99	57.183	Saimiri_boliviensis_boliviensis
ENSXCOG00000005020	aptx	98	55.429	ENSSHAG00000012205	APTX	94	55.429	Sarcophilus_harrisii
ENSXCOG00000005020	aptx	100	64.804	ENSSFOG00015009267	aptx	100	64.804	Scleropages_formosus
ENSXCOG00000005020	aptx	100	73.219	ENSSMAG00000008839	aptx	100	73.219	Scophthalmus_maximus
ENSXCOG00000005020	aptx	100	72.650	ENSSDUG00000001989	aptx	100	72.650	Seriola_dumerili
ENSXCOG00000005020	aptx	100	72.934	ENSSLDG00000004915	aptx	100	72.934	Seriola_lalandi_dorsalis
ENSXCOG00000005020	aptx	100	56.906	ENSSPUG00000008994	APTX	86	56.906	Sphenodon_punctatus
ENSXCOG00000005020	aptx	100	74.074	ENSSPAG00000020373	aptx	100	74.074	Stegastes_partitus
ENSXCOG00000005020	aptx	99	57.062	ENSSSCG00000011001	APTX	99	57.062	Sus_scrofa
ENSXCOG00000005020	aptx	100	55.211	ENSTGUG00000001441	APTX	99	55.211	Taeniopygia_guttata
ENSXCOG00000005020	aptx	99	69.429	ENSTRUG00000009794	aptx	99	69.429	Takifugu_rubripes
ENSXCOG00000005020	aptx	99	69.429	ENSTNIG00000010570	aptx	99	69.429	Tetraodon_nigroviridis
ENSXCOG00000005020	aptx	100	52.247	ENSTBEG00000008504	APTX	96	52.247	Tupaia_belangeri
ENSXCOG00000005020	aptx	93	51.506	ENSTTRG00000007384	APTX	95	51.506	Tursiops_truncatus
ENSXCOG00000005020	aptx	99	56.901	ENSUAMG00000003700	APTX	97	56.901	Ursus_americanus
ENSXCOG00000005020	aptx	99	56.901	ENSUMAG00000005837	APTX	99	56.901	Ursus_maritimus
ENSXCOG00000005020	aptx	62	69.767	ENSVPAG00000001297	APTX	64	69.767	Vicugna_pacos
ENSXCOG00000005020	aptx	100	56.461	ENSVVUG00000021130	APTX	99	56.461	Vulpes_vulpes
ENSXCOG00000005020	aptx	99	55.807	ENSXETG00000024143	aptx	99	56.780	Xenopus_tropicalis
ENSXCOG00000005020	aptx	100	94.017	ENSXMAG00000022086	aptx	97	94.017	Xiphophorus_maculatus