EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000005025 (Gene tree)
Gene ID: -
Gene Symbol: zc3h3
Alias: fj68a07|wu:fj68a07
Full Name: zinc finger CCCH-type containing 3
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 61913 bases
Position: chrKQ557224.1:21224598-21286510
Accession: ZDB-GENE-030131-9399
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000006500	zf-CCCH	PF00642.24	1.9e-19	1	2
ENSXCOP00000006500	zf-CCCH	PF00642.24	1.9e-19	2	2
ENSXCOP00000006502	zf-CCCH	PF00642.24	3.1e-19	1	2
ENSXCOP00000006502	zf-CCCH	PF00642.24	3.1e-19	2	2
ENSXCOP00000006496	zf-CCCH	PF00642.24	4.1e-19	1	2
ENSXCOP00000006496	zf-CCCH	PF00642.24	4.1e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000006576	-	2292	-	ENSXCOP00000006496	763 (aa)	-	-
ENSXCOT00000006582	-	2262	-	ENSXCOP00000006502	753 (aa)	-	-
ENSXCOT00000006580	-	2040	-	ENSXCOP00000006500	679 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000005025's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000005025's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000005025	zc3h3	66	42.777	ENSG00000014164	ZC3H3	53	42.777	Homo_sapiens
ENSXCOG00000005025	zc3h3	92	79.032	ENSAPOG00000011522	zc3h3	79	79.032	Acanthochromis_polyacanthus
ENSXCOG00000005025	zc3h3	90	77.600	ENSACIG00000005563	zc3h3	84	72.470	Amphilophus_citrinellus
ENSXCOG00000005025	zc3h3	82	91.765	ENSAOCG00000013763	zc3h3	77	91.765	Amphiprion_ocellaris
ENSXCOG00000005025	zc3h3	78	92.308	ENSAPEG00000020037	zc3h3	68	92.308	Amphiprion_percula
ENSXCOG00000005025	zc3h3	93	75.294	ENSATEG00000003718	zc3h3	79	76.113	Anabas_testudineus
ENSXCOG00000005025	zc3h3	65	42.453	ENSANAG00000018742	ZC3H3	61	39.869	Aotus_nancymaae
ENSXCOG00000005025	zc3h3	92	79.352	ENSACLG00000023035	zc3h3	78	79.352	Astatotilapia_calliptera
ENSXCOG00000005025	zc3h3	89	65.476	ENSAMXG00000041805	zc3h3	56	65.476	Astyanax_mexicanus
ENSXCOG00000005025	zc3h3	70	41.361	ENSBTAG00000021472	ZC3H3	62	41.536	Bos_taurus
ENSXCOG00000005025	zc3h3	66	42.964	ENSCJAG00000021439	ZC3H3	52	42.214	Callithrix_jacchus
ENSXCOG00000005025	zc3h3	67	42.222	ENSCAFG00000001299	ZC3H3	68	40.902	Canis_familiaris
ENSXCOG00000005025	zc3h3	67	42.222	ENSCAFG00020018654	ZC3H3	59	40.902	Canis_lupus_dingo
ENSXCOG00000005025	zc3h3	66	41.966	ENSCHIG00000018027	ZC3H3	54	42.155	Capra_hircus
ENSXCOG00000005025	zc3h3	80	73.684	ENSTSYG00000034906	ZC3H3	53	42.286	Carlito_syrichta
ENSXCOG00000005025	zc3h3	65	36.882	ENSCAPG00000013918	ZC3H3	53	36.882	Cavia_aperea
ENSXCOG00000005025	zc3h3	65	42.418	ENSCPOG00000006248	ZC3H3	52	42.418	Cavia_porcellus
ENSXCOG00000005025	zc3h3	66	43.585	ENSCCAG00000035267	ZC3H3	62	40.558	Cebus_capucinus
ENSXCOG00000005025	zc3h3	66	42.697	ENSCATG00000020900	ZC3H3	53	42.509	Cercocebus_atys
ENSXCOG00000005025	zc3h3	65	43.629	ENSCLAG00000009999	ZC3H3	52	43.629	Chinchilla_lanigera
ENSXCOG00000005025	zc3h3	66	42.777	ENSCSAG00000009074	ZC3H3	52	42.589	Chlorocebus_sabaeus
ENSXCOG00000005025	zc3h3	66	42.777	ENSCANG00000032420	ZC3H3	53	42.777	Colobus_angolensis_palliatus
ENSXCOG00000005025	zc3h3	69	41.259	ENSCGRG00001016268	Zc3h3	60	40.461	Cricetulus_griseus_chok1gshd
ENSXCOG00000005025	zc3h3	69	41.259	ENSCGRG00000012889	Zc3h3	60	40.461	Cricetulus_griseus_crigri
ENSXCOG00000005025	zc3h3	91	69.355	ENSCSEG00000002583	zc3h3	74	69.231	Cynoglossus_semilaevis
ENSXCOG00000005025	zc3h3	78	63.672	ENSDARG00000090751	zc3h3	78	64.453	Danio_rerio
ENSXCOG00000005025	zc3h3	74	57.988	ENSDNOG00000031054	ZC3H3	58	57.988	Dasypus_novemcinctus
ENSXCOG00000005025	zc3h3	69	41.818	ENSDORG00000023832	Zc3h3	57	41.818	Dipodomys_ordii
ENSXCOG00000005025	zc3h3	67	41.530	ENSEASG00005009621	ZC3H3	53	41.530	Equus_asinus_asinus
ENSXCOG00000005025	zc3h3	60	40.404	ENSECAG00000012556	ZC3H3	52	40.404	Equus_caballus
ENSXCOG00000005025	zc3h3	69	67.200	ENSELUG00000024269	zc3h3	51	64.394	Esox_lucius
ENSXCOG00000005025	zc3h3	71	40.799	ENSFCAG00000013238	ZC3H3	54	42.458	Felis_catus
ENSXCOG00000005025	zc3h3	64	40.797	ENSFALG00000009538	ZC3H3	64	80.392	Ficedula_albicollis
ENSXCOG00000005025	zc3h3	69	41.113	ENSFDAG00000017737	ZC3H3	56	41.113	Fukomys_damarensis
ENSXCOG00000005025	zc3h3	92	83.806	ENSFHEG00000017714	zc3h3	79	83.806	Fundulus_heteroclitus
ENSXCOG00000005025	zc3h3	92	92.593	ENSGAFG00000014360	zc3h3	79	89.979	Gambusia_affinis
ENSXCOG00000005025	zc3h3	65	42.857	ENSGGOG00000002833	ZC3H3	54	42.857	Gorilla_gorilla
ENSXCOG00000005025	zc3h3	93	78.656	ENSHBUG00000004627	zc3h3	78	79.352	Haplochromis_burtoni
ENSXCOG00000005025	zc3h3	65	41.843	ENSHGLG00000011234	ZC3H3	52	41.843	Heterocephalus_glaber_female
ENSXCOG00000005025	zc3h3	65	40.074	ENSHGLG00100006782	ZC3H3	57	40.074	Heterocephalus_glaber_male
ENSXCOG00000005025	zc3h3	93	66.932	ENSHCOG00000006579	zc3h3	79	68.526	Hippocampus_comes
ENSXCOG00000005025	zc3h3	91	68.333	ENSIPUG00000006438	zc3h3	77	68.333	Ictalurus_punctatus
ENSXCOG00000005025	zc3h3	70	41.608	ENSSTOG00000004358	ZC3H3	51	42.322	Ictidomys_tridecemlineatus
ENSXCOG00000005025	zc3h3	68	41.682	ENSJJAG00000023757	Zc3h3	64	39.252	Jaculus_jaculus
ENSXCOG00000005025	zc3h3	92	78.947	ENSKMAG00000017876	zc3h3	79	78.947	Kryptolebias_marmoratus
ENSXCOG00000005025	zc3h3	78	45.176	ENSLOCG00000008621	ZC3H3	63	45.329	Lepisosteus_oculatus
ENSXCOG00000005025	zc3h3	66	42.777	ENSMFAG00000036060	ZC3H3	53	42.589	Macaca_fascicularis
ENSXCOG00000005025	zc3h3	66	42.777	ENSMNEG00000029433	ZC3H3	53	42.589	Macaca_nemestrina
ENSXCOG00000005025	zc3h3	66	42.777	ENSMLEG00000038139	ZC3H3	53	42.589	Mandrillus_leucophaeus
ENSXCOG00000005025	zc3h3	91	78.903	ENSMAMG00000014787	zc3h3	78	78.903	Mastacembelus_armatus
ENSXCOG00000005025	zc3h3	92	79.352	ENSMZEG00005017290	zc3h3	78	79.352	Maylandia_zebra
ENSXCOG00000005025	zc3h3	67	40.653	ENSMAUG00000011009	Zc3h3	60	39.409	Mesocricetus_auratus
ENSXCOG00000005025	zc3h3	64	43.470	ENSMICG00000001100	ZC3H3	52	43.470	Microcebus_murinus
ENSXCOG00000005025	zc3h3	70	41.463	ENSMOCG00000000733	Zc3h3	64	39.474	Microtus_ochrogaster
ENSXCOG00000005025	zc3h3	95	70.896	ENSMMOG00000016823	zc3h3	82	70.896	Mola_mola
ENSXCOG00000005025	zc3h3	66	43.017	ENSMODG00000011385	ZC3H3	56	43.738	Monodelphis_domestica
ENSXCOG00000005025	zc3h3	92	78.138	ENSMALG00000014610	zc3h3	79	78.138	Monopterus_albus
ENSXCOG00000005025	zc3h3	72	40.550	MGP_CAROLIEiJ_G0019897	Zc3h3	58	40.102	Mus_caroli
ENSXCOG00000005025	zc3h3	71	39.931	ENSMUSG00000075600	Zc3h3	57	40.000	Mus_musculus
ENSXCOG00000005025	zc3h3	66	41.575	MGP_PahariEiJ_G0019905	Zc3h3	54	41.101	Mus_pahari
ENSXCOG00000005025	zc3h3	71	40.104	MGP_SPRETEiJ_G0020797	Zc3h3	57	40.174	Mus_spretus
ENSXCOG00000005025	zc3h3	67	42.279	ENSMPUG00000008357	ZC3H3	58	42.831	Mustela_putorius_furo
ENSXCOG00000005025	zc3h3	65	41.667	ENSNGAG00000008574	Zc3h3	53	41.852	Nannospalax_galili
ENSXCOG00000005025	zc3h3	98	66.361	ENSNBRG00000005454	zc3h3	85	66.361	Neolamprologus_brichardi
ENSXCOG00000005025	zc3h3	66	39.777	ENSNLEG00000001681	ZC3H3	55	39.312	Nomascus_leucogenys
ENSXCOG00000005025	zc3h3	66	43.411	ENSMEUG00000008554	ZC3H3	54	43.411	Notamacropus_eugenii
ENSXCOG00000005025	zc3h3	69	41.533	ENSODEG00000014239	ZC3H3	57	41.533	Octodon_degus
ENSXCOG00000005025	zc3h3	71	42.487	ENSOANG00000003534	-	65	42.487	Ornithorhynchus_anatinus
ENSXCOG00000005025	zc3h3	92	73.684	ENSORLG00000026930	zc3h3	79	73.200	Oryzias_latipes
ENSXCOG00000005025	zc3h3	92	73.684	ENSORLG00020002734	zc3h3	79	73.200	Oryzias_latipes_hni
ENSXCOG00000005025	zc3h3	92	73.684	ENSORLG00015001257	zc3h3	79	73.200	Oryzias_latipes_hsok
ENSXCOG00000005025	zc3h3	96	45.652	ENSOMEG00000015369	zc3h3	99	46.834	Oryzias_melastigma
ENSXCOG00000005025	zc3h3	65	43.264	ENSOGAG00000014907	ZC3H3	53	42.642	Otolemur_garnettii
ENSXCOG00000005025	zc3h3	69	39.286	ENSOARG00000000808	ZC3H3	56	39.464	Ovis_aries
ENSXCOG00000005025	zc3h3	71	39.930	ENSPPRG00000011707	ZC3H3	58	40.630	Panthera_pardus
ENSXCOG00000005025	zc3h3	66	42.964	ENSPTRG00000020655	ZC3H3	53	42.964	Pan_troglodytes
ENSXCOG00000005025	zc3h3	66	42.589	ENSPANG00000016578	ZC3H3	53	42.589	Papio_anubis
ENSXCOG00000005025	zc3h3	81	44.970	ENSPKIG00000002936	zc3h3	76	59.533	Paramormyrops_kingsleyae
ENSXCOG00000005025	zc3h3	70	40.901	ENSPEMG00000013893	Zc3h3	56	40.901	Peromyscus_maniculatus_bairdii
ENSXCOG00000005025	zc3h3	95	89.552	ENSPFOG00000023405	zc3h3	85	84.981	Poecilia_formosa
ENSXCOG00000005025	zc3h3	93	89.765	ENSPLAG00000001686	zc3h3	84	85.092	Poecilia_latipinna
ENSXCOG00000005025	zc3h3	93	89.339	ENSPMEG00000002341	zc3h3	84	84.697	Poecilia_mexicana
ENSXCOG00000005025	zc3h3	93	89.630	ENSPREG00000008923	zc3h3	80	89.339	Poecilia_reticulata
ENSXCOG00000005025	zc3h3	66	42.589	ENSPPYG00000018935	ZC3H3	53	42.402	Pongo_abelii
ENSXCOG00000005025	zc3h3	64	43.023	ENSPCOG00000028174	ZC3H3	52	43.023	Propithecus_coquereli
ENSXCOG00000005025	zc3h3	92	78.947	ENSPNYG00000023105	zc3h3	78	78.947	Pundamilia_nyererei
ENSXCOG00000005025	zc3h3	77	66.135	ENSPNAG00000009850	zc3h3	55	66.135	Pygocentrus_nattereri
ENSXCOG00000005025	zc3h3	66	42.402	ENSRBIG00000039855	ZC3H3	53	42.214	Rhinopithecus_bieti
ENSXCOG00000005025	zc3h3	66	42.589	ENSRROG00000040493	ZC3H3	53	42.402	Rhinopithecus_roxellana
ENSXCOG00000005025	zc3h3	66	43.346	ENSSBOG00000021819	ZC3H3	62	40.558	Saimiri_boliviensis_boliviensis
ENSXCOG00000005025	zc3h3	91	51.012	ENSSFOG00015001784	zc3h3	80	51.600	Scleropages_formosus
ENSXCOG00000005025	zc3h3	92	75.000	ENSSMAG00000016302	zc3h3	78	73.541	Scophthalmus_maximus
ENSXCOG00000005025	zc3h3	92	79.352	ENSSDUG00000021871	zc3h3	78	79.352	Seriola_dumerili
ENSXCOG00000005025	zc3h3	92	79.757	ENSSLDG00000016166	zc3h3	79	79.757	Seriola_lalandi_dorsalis
ENSXCOG00000005025	zc3h3	92	78.629	ENSSPAG00000008518	zc3h3	79	78.629	Stegastes_partitus
ENSXCOG00000005025	zc3h3	67	41.002	ENSSSCG00000006956	ZC3H3	50	61.165	Sus_scrofa
ENSXCOG00000005025	zc3h3	65	41.698	ENSUAMG00000012919	ZC3H3	65	39.701	Ursus_americanus
ENSXCOG00000005025	zc3h3	67	42.037	ENSVVUG00000022609	ZC3H3	55	42.096	Vulpes_vulpes
ENSXCOG00000005025	zc3h3	77	79.487	ENSXETG00000004937	zc3h3	66	79.487	Xenopus_tropicalis
ENSXCOG00000005025	zc3h3	92	99.259	ENSXMAG00000006422	zc3h3	79	96.581	Xiphophorus_maculatus