EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000005131 (Gene tree)
Gene ID: -
Gene Symbol: sfswap
Alias: sfrs8|srsf8|zgc:56184
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 16106 bases
Position: chrKQ557223.1:17500770-17516875
Accession: ZDB-GENE-040426-931
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000006626	DRY_EERY	PF09750.9	9.1e-33	1	1
ENSXCOP00000006626	Surp	PF01805.20	3.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000006707	-	1062	-	ENSXCOP00000006626	353 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000005131's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000005131's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000005131	sfswap	77	71.479	ENSG00000061936	SFSWAP	94	60.526	Homo_sapiens
ENSXCOG00000005131	sfswap	70	45.850	FBgn0003638	su(w[a])	56	57.303	Drosophila_melanogaster
ENSXCOG00000005131	sfswap	85	82.667	ENSFHEG00000011149	-	85	79.667	Fundulus_heteroclitus
ENSXCOG00000005131	sfswap	85	85.149	ENSMMOG00000021053	-	95	75.073	Mola_mola
ENSXCOG00000005131	sfswap	77	70.070	MGP_CAROLIEiJ_G0027780	Sfswap	84	63.208	Mus_caroli
ENSXCOG00000005131	sfswap	77	69.366	ENSMUSG00000029439	Sfswap	84	63.208	Mus_musculus
ENSXCOG00000005131	sfswap	77	70.070	MGP_PahariEiJ_G0024360	Sfswap	94	59.649	Mus_pahari
ENSXCOG00000005131	sfswap	77	70.423	MGP_SPRETEiJ_G0028779	Sfswap	84	63.208	Mus_spretus
ENSXCOG00000005131	sfswap	78	65.845	ENSPMAG00000008279	sfswap	63	64.789	Petromyzon_marinus
ENSXCOG00000005131	sfswap	85	74.919	ENSTNIG00000006156	-	97	74.919	Tetraodon_nigroviridis