EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000005178 (Gene tree)
Gene ID: -
Gene Symbol: rasef
Alias: si:ch73-275j21.1
Full Name: RAS and EF-hand domain containing
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 14332 bases
Position: chrKQ557204.1:20128917-20143248
Accession: ZDB-GENE-081105-157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000006691	MMR_HSR1	PF01926.23	9.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000006773	-	1770	-	ENSXCOP00000006691	589 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000005178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000005178's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000005178	rasef	75	37.500	ENSXCOG00000020244	zgc:162879	93	38.085

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000005178	rasef	83	50.702	ENSG00000165105	RASEF	76	50.702	Homo_sapiens
ENSXCOG00000005178	rasef	87	66.135	ENSAPOG00000024369	rasef	90	64.808	Acanthochromis_polyacanthus
ENSXCOG00000005178	rasef	83	50.351	ENSAMEG00000009467	RASEF	77	50.351	Ailuropoda_melanoleuca
ENSXCOG00000005178	rasef	84	67.416	ENSACIG00000005549	rasef	81	67.416	Amphilophus_citrinellus
ENSXCOG00000005178	rasef	85	63.904	ENSAOCG00000011464	rasef	81	63.904	Amphiprion_ocellaris
ENSXCOG00000005178	rasef	84	58.003	ENSAPEG00000003461	rasef	81	59.380	Amphiprion_percula
ENSXCOG00000005178	rasef	83	64.161	ENSATEG00000015032	rasef	84	64.125	Anabas_testudineus
ENSXCOG00000005178	rasef	87	48.744	ENSAPLG00000013969	RASEF	91	49.079	Anas_platyrhynchos
ENSXCOG00000005178	rasef	84	50.088	ENSACAG00000002155	RASEF	78	50.796	Anolis_carolinensis
ENSXCOG00000005178	rasef	83	50.088	ENSANAG00000035226	RASEF	76	50.088	Aotus_nancymaae
ENSXCOG00000005178	rasef	84	65.729	ENSACLG00000017818	rasef	81	65.729	Astatotilapia_calliptera
ENSXCOG00000005178	rasef	87	52.254	ENSAMXG00000011411	rasef	81	52.254	Astyanax_mexicanus
ENSXCOG00000005178	rasef	87	49.503	ENSBTAG00000021751	RASEF	80	49.503	Bos_taurus
ENSXCOG00000005178	rasef	87	49.010	ENSCJAG00000003547	RASEF	80	49.175	Callithrix_jacchus
ENSXCOG00000005178	rasef	83	49.649	ENSCAFG00000001453	RASEF	68	49.649	Canis_familiaris
ENSXCOG00000005178	rasef	83	50.351	ENSCAFG00020023859	RASEF	75	49.825	Canis_lupus_dingo
ENSXCOG00000005178	rasef	91	48.413	ENSCHIG00000020336	RASEF	95	49.834	Capra_hircus
ENSXCOG00000005178	rasef	70	51.261	ENSTSYG00000006987	RASEF	89	51.261	Carlito_syrichta
ENSXCOG00000005178	rasef	73	45.378	ENSCAPG00000010585	-	99	45.378	Cavia_aperea
ENSXCOG00000005178	rasef	83	48.944	ENSCPOG00000005004	RASEF	94	48.677	Cavia_porcellus
ENSXCOG00000005178	rasef	83	50.175	ENSCCAG00000031624	RASEF	76	50.175	Cebus_capucinus
ENSXCOG00000005178	rasef	83	50.439	ENSCSAG00000007663	RASEF	76	50.439	Chlorocebus_sabaeus
ENSXCOG00000005178	rasef	83	49.381	ENSCHOG00000001831	RASEF	93	49.381	Choloepus_hoffmanni
ENSXCOG00000005178	rasef	84	49.301	ENSCPBG00000019037	RASEF	89	49.912	Chrysemys_picta_bellii
ENSXCOG00000005178	rasef	83	50.264	ENSCANG00000034081	RASEF	76	50.264	Colobus_angolensis_palliatus
ENSXCOG00000005178	rasef	87	48.013	ENSCGRG00001001324	Rasef	100	48.013	Cricetulus_griseus_chok1gshd
ENSXCOG00000005178	rasef	81	47.276	ENSCGRG00000006455	Rasef	100	47.276	Cricetulus_griseus_crigri
ENSXCOG00000005178	rasef	79	63.147	ENSCSEG00000017898	rasef	76	63.221	Cynoglossus_semilaevis
ENSXCOG00000005178	rasef	86	66.116	ENSCVAG00000006168	rasef	73	66.116	Cyprinodon_variegatus
ENSXCOG00000005178	rasef	87	53.223	ENSDARG00000076250	rasef	84	53.223	Danio_rerio
ENSXCOG00000005178	rasef	83	49.825	ENSDNOG00000006002	RASEF	68	49.825	Dasypus_novemcinctus
ENSXCOG00000005178	rasef	80	46.250	ENSDORG00000015570	Rasef	100	46.154	Dipodomys_ordii
ENSXCOG00000005178	rasef	85	42.456	ENSEBUG00000012629	rasef	78	42.124	Eptatretus_burgeri
ENSXCOG00000005178	rasef	59	65.143	ENSEBUG00000012179	rasef	64	65.143	Eptatretus_burgeri
ENSXCOG00000005178	rasef	83	51.228	ENSEASG00005015967	RASEF	92	51.228	Equus_asinus_asinus
ENSXCOG00000005178	rasef	83	51.228	ENSECAG00000000324	RASEF	92	51.228	Equus_caballus
ENSXCOG00000005178	rasef	83	43.881	ENSEEUG00000008455	RASEF	99	43.881	Erinaceus_europaeus
ENSXCOG00000005178	rasef	86	48.748	ENSFCAG00000002416	RASEF	80	49.249	Felis_catus
ENSXCOG00000005178	rasef	84	50.521	ENSFALG00000003611	RASEF	92	50.524	Ficedula_albicollis
ENSXCOG00000005178	rasef	86	49.172	ENSFDAG00000013428	RASEF	99	49.169	Fukomys_damarensis
ENSXCOG00000005178	rasef	83	71.236	ENSFHEG00000022470	rasef	76	71.236	Fundulus_heteroclitus
ENSXCOG00000005178	rasef	83	61.988	ENSGMOG00000010090	rasef	82	61.988	Gadus_morhua
ENSXCOG00000005178	rasef	84	50.087	ENSGALG00000012576	RASEF	79	50.436	Gallus_gallus
ENSXCOG00000005178	rasef	83	72.566	ENSGAFG00000013735	rasef	78	72.566	Gambusia_affinis
ENSXCOG00000005178	rasef	84	62.411	ENSGACG00000007528	rasef	80	62.411	Gasterosteus_aculeatus
ENSXCOG00000005178	rasef	84	48.947	ENSGAGG00000007338	RASEF	80	52.425	Gopherus_agassizii
ENSXCOG00000005178	rasef	83	50.526	ENSGGOG00000006651	RASEF	76	50.526	Gorilla_gorilla
ENSXCOG00000005178	rasef	84	65.729	ENSHBUG00000010345	rasef	70	65.729	Haplochromis_burtoni
ENSXCOG00000005178	rasef	86	49.076	ENSHGLG00000000399	RASEF	80	49.076	Heterocephalus_glaber_female
ENSXCOG00000005178	rasef	86	49.076	ENSHGLG00100008043	RASEF	98	49.076	Heterocephalus_glaber_male
ENSXCOG00000005178	rasef	84	63.757	ENSHCOG00000010976	rasef	77	64.107	Hippocampus_comes
ENSXCOG00000005178	rasef	84	51.590	ENSIPUG00000008768	rasef	78	51.590	Ictalurus_punctatus
ENSXCOG00000005178	rasef	83	50.524	ENSSTOG00000004311	RASEF	76	50.524	Ictidomys_tridecemlineatus
ENSXCOG00000005178	rasef	88	48.764	ENSJJAG00000023215	Rasef	99	48.764	Jaculus_jaculus
ENSXCOG00000005178	rasef	83	59.418	ENSKMAG00000021106	rasef	71	61.130	Kryptolebias_marmoratus
ENSXCOG00000005178	rasef	77	85.000	ENSLBEG00000021098	-	78	69.941	Labrus_bergylta
ENSXCOG00000005178	rasef	81	66.818	ENSLACG00000010849	RASEF	83	48.500	Latimeria_chalumnae
ENSXCOG00000005178	rasef	83	53.286	ENSLOCG00000002094	rasef	79	53.286	Lepisosteus_oculatus
ENSXCOG00000005178	rasef	88	49.668	ENSLAFG00000010552	RASEF	99	49.833	Loxodonta_africana
ENSXCOG00000005178	rasef	87	48.922	ENSMFAG00000046414	RASEF	80	48.922	Macaca_fascicularis
ENSXCOG00000005178	rasef	83	50.615	ENSMNEG00000044341	RASEF	75	50.615	Macaca_nemestrina
ENSXCOG00000005178	rasef	83	50.439	ENSMLEG00000034579	RASEF	76	50.439	Mandrillus_leucophaeus
ENSXCOG00000005178	rasef	73	64.894	ENSMAMG00000001536	rasef	78	64.894	Mastacembelus_armatus
ENSXCOG00000005178	rasef	83	64.829	ENSMZEG00005004819	rasef	81	64.829	Maylandia_zebra
ENSXCOG00000005178	rasef	87	48.093	ENSMAUG00000010820	Rasef	99	48.093	Mesocricetus_auratus
ENSXCOG00000005178	rasef	87	49.338	ENSMICG00000011836	RASEF	80	49.338	Microcebus_murinus
ENSXCOG00000005178	rasef	87	47.682	ENSMOCG00000000943	Rasef	100	46.924	Microtus_ochrogaster
ENSXCOG00000005178	rasef	83	66.479	ENSMMOG00000000102	rasef	80	67.619	Mola_mola
ENSXCOG00000005178	rasef	83	49.209	ENSMODG00000009037	RASEF	76	49.209	Monodelphis_domestica
ENSXCOG00000005178	rasef	83	63.818	ENSMALG00000009830	rasef	80	63.818	Monopterus_albus
ENSXCOG00000005178	rasef	87	48.259	MGP_CAROLIEiJ_G0026109	Rasef	100	47.711	Mus_caroli
ENSXCOG00000005178	rasef	87	48.425	ENSMUSG00000043003	Rasef	100	47.887	Mus_musculus
ENSXCOG00000005178	rasef	87	48.339	MGP_PahariEiJ_G0028447	Rasef	100	47.972	Mus_pahari
ENSXCOG00000005178	rasef	87	48.339	MGP_SPRETEiJ_G0027075	Rasef	100	47.795	Mus_spretus
ENSXCOG00000005178	rasef	77	48.593	ENSMPUG00000013070	RASEF	94	48.593	Mustela_putorius_furo
ENSXCOG00000005178	rasef	83	50.704	ENSMLUG00000013108	RASEF	80	49.169	Myotis_lucifugus
ENSXCOG00000005178	rasef	77	49.248	ENSNGAG00000014878	Rasef	94	49.248	Nannospalax_galili
ENSXCOG00000005178	rasef	83	60.545	ENSNBRG00000012335	rasef	82	60.545	Neolamprologus_brichardi
ENSXCOG00000005178	rasef	83	50.351	ENSNLEG00000003245	RASEF	76	50.351	Nomascus_leucogenys
ENSXCOG00000005178	rasef	83	48.077	ENSMEUG00000016412	RASEF	76	48.077	Notamacropus_eugenii
ENSXCOG00000005178	rasef	79	43.438	ENSOPRG00000002742	-	72	43.438	Ochotona_princeps
ENSXCOG00000005178	rasef	84	65.909	ENSONIG00000015021	rasef	80	65.608	Oreochromis_niloticus
ENSXCOG00000005178	rasef	87	47.471	ENSOANG00000010379	RASEF	81	47.471	Ornithorhynchus_anatinus
ENSXCOG00000005178	rasef	87	48.671	ENSOCUG00000001548	RASEF	80	48.671	Oryctolagus_cuniculus
ENSXCOG00000005178	rasef	83	62.456	ENSORLG00000005076	rasef	69	62.172	Oryzias_latipes
ENSXCOG00000005178	rasef	83	61.579	ENSORLG00020020049	rasef	69	61.996	Oryzias_latipes_hni
ENSXCOG00000005178	rasef	83	61.053	ENSORLG00015008479	rasef	69	61.471	Oryzias_latipes_hsok
ENSXCOG00000005178	rasef	83	62.105	ENSOMEG00000023457	rasef	83	62.105	Oryzias_melastigma
ENSXCOG00000005178	rasef	83	51.142	ENSOGAG00000012724	RASEF	94	51.142	Otolemur_garnettii
ENSXCOG00000005178	rasef	87	49.423	ENSOARG00000009073	RASEF	75	49.423	Ovis_aries
ENSXCOG00000005178	rasef	83	50.877	ENSPPAG00000042152	RASEF	78	50.877	Pan_paniscus
ENSXCOG00000005178	rasef	83	50.000	ENSPPRG00000008487	RASEF	76	50.526	Panthera_pardus
ENSXCOG00000005178	rasef	86	48.829	ENSPTIG00000006676	RASEF	86	50.851	Panthera_tigris_altaica
ENSXCOG00000005178	rasef	83	50.877	ENSPTRG00000021052	RASEF	78	50.877	Pan_troglodytes
ENSXCOG00000005178	rasef	83	50.264	ENSPANG00000024899	RASEF	76	50.264	Papio_anubis
ENSXCOG00000005178	rasef	84	49.650	ENSPSIG00000017699	RASEF	89	50.615	Pelodiscus_sinensis
ENSXCOG00000005178	rasef	84	59.152	ENSPMGG00000015499	rasef	86	91.176	Periophthalmus_magnuspinnatus
ENSXCOG00000005178	rasef	87	48.344	ENSPEMG00000002797	Rasef	100	47.627	Peromyscus_maniculatus_bairdii
ENSXCOG00000005178	rasef	88	39.350	ENSPMAG00000001634	rasef	79	40.614	Petromyzon_marinus
ENSXCOG00000005178	rasef	83	49.037	ENSPCIG00000027655	RASEF	76	48.866	Phascolarctos_cinereus
ENSXCOG00000005178	rasef	83	72.401	ENSPFOG00000018924	rasef	77	72.401	Poecilia_formosa
ENSXCOG00000005178	rasef	84	73.988	ENSPLAG00000022907	RASEF	91	74.031	Poecilia_latipinna
ENSXCOG00000005178	rasef	83	73.619	ENSPMEG00000006546	rasef	80	73.619	Poecilia_mexicana
ENSXCOG00000005178	rasef	83	72.064	ENSPREG00000018728	rasef	69	72.064	Poecilia_reticulata
ENSXCOG00000005178	rasef	83	50.526	ENSPPYG00000019320	RASEF	76	50.526	Pongo_abelii
ENSXCOG00000005178	rasef	87	49.425	ENSPCOG00000022979	RASEF	80	49.425	Propithecus_coquereli
ENSXCOG00000005178	rasef	83	50.613	ENSPVAG00000003682	RASEF	76	50.613	Pteropus_vampyrus
ENSXCOG00000005178	rasef	86	64.209	ENSPNYG00000010579	rasef	82	64.209	Pundamilia_nyererei
ENSXCOG00000005178	rasef	87	51.333	ENSPNAG00000016447	rasef	83	51.333	Pygocentrus_nattereri
ENSXCOG00000005178	rasef	87	46.281	ENSRNOG00000024190	Rasef	83	46.281	Rattus_norvegicus
ENSXCOG00000005178	rasef	83	50.436	ENSRBIG00000039516	RASEF	76	50.436	Rhinopithecus_bieti
ENSXCOG00000005178	rasef	83	50.350	ENSRROG00000044397	RASEF	79	50.350	Rhinopithecus_roxellana
ENSXCOG00000005178	rasef	87	48.510	ENSSBOG00000029298	RASEF	80	48.510	Saimiri_boliviensis_boliviensis
ENSXCOG00000005178	rasef	87	50.836	ENSSFOG00015009014	rasef	83	50.836	Scleropages_formosus
ENSXCOG00000005178	rasef	85	56.566	ENSSMAG00000000942	rasef	82	56.566	Scophthalmus_maximus
ENSXCOG00000005178	rasef	83	58.523	ENSSDUG00000022228	rasef	76	59.023	Seriola_dumerili
ENSXCOG00000005178	rasef	84	62.718	ENSSLDG00000001784	rasef	62	63.176	Seriola_lalandi_dorsalis
ENSXCOG00000005178	rasef	84	49.731	ENSSPUG00000002899	RASEF	79	49.910	Sphenodon_punctatus
ENSXCOG00000005178	rasef	77	86.813	ENSSPAG00000002442	rasef	59	86.813	Stegastes_partitus
ENSXCOG00000005178	rasef	87	49.917	ENSSSCG00000040707	-	89	49.917	Sus_scrofa
ENSXCOG00000005178	rasef	84	50.609	ENSTGUG00000003216	RASEF	78	50.699	Taeniopygia_guttata
ENSXCOG00000005178	rasef	82	83.117	ENSTRUG00000011541	rasef	70	83.117	Takifugu_rubripes
ENSXCOG00000005178	rasef	87	60.922	ENSTNIG00000006010	rasef	79	60.922	Tetraodon_nigroviridis
ENSXCOG00000005178	rasef	87	43.750	ENSTTRG00000002061	RASEF	80	43.750	Tursiops_truncatus
ENSXCOG00000005178	rasef	86	48.911	ENSUAMG00000021591	RASEF	96	48.911	Ursus_americanus
ENSXCOG00000005178	rasef	91	47.520	ENSUMAG00000004670	RASEF	93	48.915	Ursus_maritimus
ENSXCOG00000005178	rasef	83	50.351	ENSVVUG00000029736	RASEF	91	50.351	Vulpes_vulpes
ENSXCOG00000005178	rasef	84	47.535	ENSXETG00000016758	mgc147600	78	48.501	Xenopus_tropicalis
ENSXCOG00000005178	rasef	83	73.936	ENSXMAG00000015129	rasef	80	73.936	Xiphophorus_maculatus