EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000005312 (Gene tree)
Gene ID: -
Gene Symbol: frg1
Alias: zgc:112426
Full Name: FSHD region gene 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 12657 bases
Position: chrKQ557220.1:28897739-28910395
Accession: ZDB-GENE-050417-324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000006872	FRG1	PF06229.12	6e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000006960	-	759	-	ENSXCOP00000006872	252 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000005312's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000005312's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000005312	frg1	100	64.341	ENSG00000109536	FRG1	100	75.862	Homo_sapiens
ENSXCOG00000005312	frg1	100	80.315	ENSAPOG00000001060	frg1	100	80.315	Acanthochromis_polyacanthus
ENSXCOG00000005312	frg1	100	64.729	ENSAMEG00000013503	FRG1	100	64.729	Ailuropoda_melanoleuca
ENSXCOG00000005312	frg1	85	87.793	ENSACIG00000022283	frg1	96	87.793	Amphilophus_citrinellus
ENSXCOG00000005312	frg1	85	86.854	ENSAOCG00000024240	frg1	83	86.854	Amphiprion_ocellaris
ENSXCOG00000005312	frg1	100	81.102	ENSAPEG00000002486	frg1	100	81.102	Amphiprion_percula
ENSXCOG00000005312	frg1	100	81.323	ENSATEG00000010414	frg1	100	81.323	Anabas_testudineus
ENSXCOG00000005312	frg1	100	66.406	ENSAPLG00000007785	-	100	66.406	Anas_platyrhynchos
ENSXCOG00000005312	frg1	100	67.969	ENSACAG00000006877	-	100	67.969	Anolis_carolinensis
ENSXCOG00000005312	frg1	100	64.202	ENSANAG00000020876	FRG1	100	64.981	Aotus_nancymaae
ENSXCOG00000005312	frg1	100	80.556	ENSACLG00000027065	frg1	100	80.556	Astatotilapia_calliptera
ENSXCOG00000005312	frg1	100	76.953	ENSAMXG00000032700	frg1	100	76.953	Astyanax_mexicanus
ENSXCOG00000005312	frg1	100	64.729	ENSBTAG00000007089	FRG1	100	64.729	Bos_taurus
ENSXCOG00000005312	frg1	84	40.088	WBGene00014177	frg-1	82	40.088	Caenorhabditis_elegans
ENSXCOG00000005312	frg1	100	64.202	ENSCJAG00000011272	FRG1	100	64.981	Callithrix_jacchus
ENSXCOG00000005312	frg1	100	64.729	ENSCAFG00000007135	FRG1	100	64.729	Canis_familiaris
ENSXCOG00000005312	frg1	84	70.755	ENSCAFG00020000082	-	85	70.755	Canis_lupus_dingo
ENSXCOG00000005312	frg1	100	64.729	ENSCHIG00000011585	-	100	64.729	Capra_hircus
ENSXCOG00000005312	frg1	98	45.382	ENSTSYG00000031599	-	100	45.312	Carlito_syrichta
ENSXCOG00000005312	frg1	85	71.028	ENSCAPG00000016056	-	87	71.028	Cavia_aperea
ENSXCOG00000005312	frg1	100	64.981	ENSCPOG00000022277	-	100	65.370	Cavia_porcellus
ENSXCOG00000005312	frg1	100	64.202	ENSCCAG00000024627	FRG1	100	64.981	Cebus_capucinus
ENSXCOG00000005312	frg1	100	64.729	ENSCATG00000029230	FRG1	100	64.729	Cercocebus_atys
ENSXCOG00000005312	frg1	100	48.413	ENSCLAG00000006068	-	100	48.413	Chinchilla_lanigera
ENSXCOG00000005312	frg1	100	53.488	ENSCLAG00000004960	-	100	54.264	Chinchilla_lanigera
ENSXCOG00000005312	frg1	99	47.826	ENSCLAG00000009263	-	100	48.221	Chinchilla_lanigera
ENSXCOG00000005312	frg1	100	64.981	ENSCLAG00000000370	-	100	65.370	Chinchilla_lanigera
ENSXCOG00000005312	frg1	100	64.729	ENSCSAG00000002899	FRG1	100	64.729	Chlorocebus_sabaeus
ENSXCOG00000005312	frg1	85	67.290	ENSCSAG00000017729	-	99	67.290	Chlorocebus_sabaeus
ENSXCOG00000005312	frg1	85	72.770	ENSCPBG00000009211	-	83	72.770	Chrysemys_picta_bellii
ENSXCOG00000005312	frg1	84	51.628	ENSCING00000005161	-	99	45.318	Ciona_intestinalis
ENSXCOG00000005312	frg1	53	54.887	ENSCSAVG00000008018	-	100	45.902	Ciona_savignyi
ENSXCOG00000005312	frg1	100	64.729	ENSCANG00000020991	FRG1	100	64.729	Colobus_angolensis_palliatus
ENSXCOG00000005312	frg1	100	64.729	ENSCGRG00001014998	Frg1	100	64.729	Cricetulus_griseus_chok1gshd
ENSXCOG00000005312	frg1	100	64.729	ENSCGRG00000011860	-	100	64.729	Cricetulus_griseus_crigri
ENSXCOG00000005312	frg1	100	52.918	ENSCGRG00000003902	-	96	52.896	Cricetulus_griseus_crigri
ENSXCOG00000005312	frg1	96	77.459	ENSCSEG00000015950	frg1	100	77.459	Cynoglossus_semilaevis
ENSXCOG00000005312	frg1	100	83.730	ENSCVAG00000009985	frg1	100	83.730	Cyprinodon_variegatus
ENSXCOG00000005312	frg1	100	74.118	ENSDARG00000056504	frg1	100	81.690	Danio_rerio
ENSXCOG00000005312	frg1	100	64.729	ENSDNOG00000014886	FRG1	100	64.729	Dasypus_novemcinctus
ENSXCOG00000005312	frg1	100	57.752	ENSDORG00000016190	Frg1	100	57.752	Dipodomys_ordii
ENSXCOG00000005312	frg1	85	51.869	FBgn0036964	FRG1	100	46.768	Drosophila_melanogaster
ENSXCOG00000005312	frg1	100	63.953	ENSETEG00000012349	-	100	63.985	Echinops_telfairi
ENSXCOG00000005312	frg1	59	54.730	ENSEBUG00000012359	FRG1	89	54.730	Eptatretus_burgeri
ENSXCOG00000005312	frg1	100	64.981	ENSEASG00005017497	FRG1	100	65.370	Equus_asinus_asinus
ENSXCOG00000005312	frg1	100	64.981	ENSECAG00000003122	FRG1	100	65.370	Equus_caballus
ENSXCOG00000005312	frg1	62	70.701	ENSEEUG00000000145	-	100	70.701	Erinaceus_europaeus
ENSXCOG00000005312	frg1	100	73.725	ENSELUG00000021712	frg1	100	73.725	Esox_lucius
ENSXCOG00000005312	frg1	100	64.729	ENSFCAG00000025737	FRG1	100	64.729	Felis_catus
ENSXCOG00000005312	frg1	85	72.300	ENSFALG00000011231	-	84	72.300	Ficedula_albicollis
ENSXCOG00000005312	frg1	100	56.538	ENSFDAG00000012697	-	98	60.748	Fukomys_damarensis
ENSXCOG00000005312	frg1	100	65.370	ENSFDAG00000000962	-	100	65.370	Fukomys_damarensis
ENSXCOG00000005312	frg1	100	85.039	ENSFHEG00000010540	frg1	100	85.039	Fundulus_heteroclitus
ENSXCOG00000005312	frg1	100	72.549	ENSGMOG00000000867	frg1	100	72.549	Gadus_morhua
ENSXCOG00000005312	frg1	100	67.969	ENSGALG00000013590	-	100	67.969	Gallus_gallus
ENSXCOG00000005312	frg1	81	87.440	ENSGAFG00000013855	frg1	100	87.440	Gambusia_affinis
ENSXCOG00000005312	frg1	100	74.510	ENSGACG00000016888	frg1	100	74.510	Gasterosteus_aculeatus
ENSXCOG00000005312	frg1	100	66.797	ENSGAGG00000025012	-	100	66.797	Gopherus_agassizii
ENSXCOG00000005312	frg1	64	50.617	ENSGGOG00000040796	-	67	50.617	Gorilla_gorilla
ENSXCOG00000005312	frg1	80	58.128	ENSGGOG00000012888	-	97	58.128	Gorilla_gorilla
ENSXCOG00000005312	frg1	100	80.952	ENSHBUG00000010667	frg1	100	80.952	Haplochromis_burtoni
ENSXCOG00000005312	frg1	100	56.917	ENSHGLG00000001211	-	100	56.917	Heterocephalus_glaber_female
ENSXCOG00000005312	frg1	99	62.109	ENSHGLG00000020402	-	94	62.500	Heterocephalus_glaber_female
ENSXCOG00000005312	frg1	100	64.981	ENSHGLG00000005601	FRG1	100	65.370	Heterocephalus_glaber_female
ENSXCOG00000005312	frg1	99	61.328	ENSHGLG00000020943	-	99	61.240	Heterocephalus_glaber_female
ENSXCOG00000005312	frg1	99	61.328	ENSHGLG00100021211	-	99	61.240	Heterocephalus_glaber_male
ENSXCOG00000005312	frg1	100	65.370	ENSHGLG00100016261	-	100	65.759	Heterocephalus_glaber_male
ENSXCOG00000005312	frg1	100	54.150	ENSHGLG00100015285	-	100	54.150	Heterocephalus_glaber_male
ENSXCOG00000005312	frg1	100	57.312	ENSHGLG00100010674	-	100	57.312	Heterocephalus_glaber_male
ENSXCOG00000005312	frg1	85	81.776	ENSHCOG00000000224	frg1	91	81.776	Hippocampus_comes
ENSXCOG00000005312	frg1	100	71.212	ENSIPUG00000022716	frg1	100	73.518	Ictalurus_punctatus
ENSXCOG00000005312	frg1	100	64.729	ENSSTOG00000002857	-	100	64.729	Ictidomys_tridecemlineatus
ENSXCOG00000005312	frg1	100	65.116	ENSJJAG00000020625	Frg1	100	65.134	Jaculus_jaculus
ENSXCOG00000005312	frg1	100	82.745	ENSKMAG00000005841	frg1	100	82.745	Kryptolebias_marmoratus
ENSXCOG00000005312	frg1	100	78.824	ENSLBEG00000001466	frg1	100	78.824	Labrus_bergylta
ENSXCOG00000005312	frg1	100	58.621	ENSLACG00000010243	frg1	100	59.387	Latimeria_chalumnae
ENSXCOG00000005312	frg1	100	70.196	ENSLOCG00000013868	frg1	100	70.196	Lepisosteus_oculatus
ENSXCOG00000005312	frg1	100	64.341	ENSLAFG00000011191	FRG1	100	64.341	Loxodonta_africana
ENSXCOG00000005312	frg1	98	56.800	ENSMFAG00000042873	-	98	56.800	Macaca_fascicularis
ENSXCOG00000005312	frg1	100	64.729	ENSMFAG00000031178	FRG1	100	64.729	Macaca_fascicularis
ENSXCOG00000005312	frg1	100	64.729	ENSMMUG00000001824	FRG1	100	64.729	Macaca_mulatta
ENSXCOG00000005312	frg1	94	55.649	ENSMMUG00000047496	-	97	55.649	Macaca_mulatta
ENSXCOG00000005312	frg1	96	59.919	ENSMNEG00000018620	FRG1	100	59.919	Macaca_nemestrina
ENSXCOG00000005312	frg1	100	64.729	ENSMLEG00000028881	FRG1	100	64.729	Mandrillus_leucophaeus
ENSXCOG00000005312	frg1	100	79.608	ENSMAMG00000012406	frg1	100	79.608	Mastacembelus_armatus
ENSXCOG00000005312	frg1	100	80.556	ENSMZEG00005007549	frg1	100	80.556	Maylandia_zebra
ENSXCOG00000005312	frg1	100	67.969	ENSMGAG00000011481	-	100	67.969	Meleagris_gallopavo
ENSXCOG00000005312	frg1	100	64.729	ENSMAUG00000000847	Frg1	100	64.729	Mesocricetus_auratus
ENSXCOG00000005312	frg1	100	64.729	ENSMICG00000046816	FRG1	100	64.729	Microcebus_murinus
ENSXCOG00000005312	frg1	100	59.144	ENSMOCG00000023000	Frg1	100	59.144	Microtus_ochrogaster
ENSXCOG00000005312	frg1	85	84.507	ENSMMOG00000004008	frg1	91	84.507	Mola_mola
ENSXCOG00000005312	frg1	100	64.341	ENSMODG00000019031	-	87	64.479	Monodelphis_domestica
ENSXCOG00000005312	frg1	100	78.039	ENSMALG00000018497	frg1	100	78.039	Monopterus_albus
ENSXCOG00000005312	frg1	100	64.341	MGP_CAROLIEiJ_G0031006	Frg1	100	64.341	Mus_caroli
ENSXCOG00000005312	frg1	100	64.341	ENSMUSG00000031590	Frg1	100	64.341	Mus_musculus
ENSXCOG00000005312	frg1	100	64.729	MGP_PahariEiJ_G0021475	Frg1	100	64.729	Mus_pahari
ENSXCOG00000005312	frg1	100	63.953	MGP_SPRETEiJ_G0032120	Frg1	100	63.953	Mus_spretus
ENSXCOG00000005312	frg1	100	64.729	ENSMPUG00000017962	FRG1	100	64.729	Mustela_putorius_furo
ENSXCOG00000005312	frg1	100	64.981	ENSMLUG00000023179	FRG1	100	65.370	Myotis_lucifugus
ENSXCOG00000005312	frg1	100	64.341	ENSNGAG00000016411	Frg1	100	64.368	Nannospalax_galili
ENSXCOG00000005312	frg1	81	78.431	ENSNBRG00000006806	frg1	95	78.431	Neolamprologus_brichardi
ENSXCOG00000005312	frg1	79	61.692	ENSNLEG00000028874	-	91	61.692	Nomascus_leucogenys
ENSXCOG00000005312	frg1	100	57.588	ENSNLEG00000035849	-	100	57.588	Nomascus_leucogenys
ENSXCOG00000005312	frg1	100	52.453	ENSNLEG00000032333	-	100	52.830	Nomascus_leucogenys
ENSXCOG00000005312	frg1	94	56.118	ENSNLEG00000036059	-	95	56.118	Nomascus_leucogenys
ENSXCOG00000005312	frg1	100	45.059	ENSNLEG00000032846	-	100	58.929	Nomascus_leucogenys
ENSXCOG00000005312	frg1	100	63.813	ENSNLEG00000000930	FRG1	100	64.202	Nomascus_leucogenys
ENSXCOG00000005312	frg1	60	69.079	ENSMEUG00000007509	-	59	69.079	Notamacropus_eugenii
ENSXCOG00000005312	frg1	100	55.426	ENSOPRG00000004722	-	100	55.556	Ochotona_princeps
ENSXCOG00000005312	frg1	100	64.981	ENSODEG00000006458	-	100	65.370	Octodon_degus
ENSXCOG00000005312	frg1	100	51.779	ENSODEG00000006953	-	100	51.779	Octodon_degus
ENSXCOG00000005312	frg1	100	80.469	ENSONIG00000010162	frg1	100	80.469	Oreochromis_niloticus
ENSXCOG00000005312	frg1	88	59.641	ENSOANG00000005659	-	92	59.641	Ornithorhynchus_anatinus
ENSXCOG00000005312	frg1	100	65.116	ENSOCUG00000009038	-	100	65.134	Oryctolagus_cuniculus
ENSXCOG00000005312	frg1	96	76.230	ENSORLG00000008106	frg1	89	76.230	Oryzias_latipes
ENSXCOG00000005312	frg1	100	77.255	ENSORLG00020014355	frg1	100	77.255	Oryzias_latipes_hni
ENSXCOG00000005312	frg1	100	77.647	ENSORLG00015014159	frg1	100	77.647	Oryzias_latipes_hsok
ENSXCOG00000005312	frg1	85	71.759	ENSOMEG00000002468	frg1	89	71.759	Oryzias_melastigma
ENSXCOG00000005312	frg1	100	64.729	ENSOGAG00000005749	-	100	65.637	Otolemur_garnettii
ENSXCOG00000005312	frg1	100	63.602	ENSOARG00000008592	FRG1	100	63.602	Ovis_aries
ENSXCOG00000005312	frg1	96	47.710	ENSPPAG00000043174	-	100	47.710	Pan_paniscus
ENSXCOG00000005312	frg1	83	63.426	ENSPPAG00000043170	-	100	63.426	Pan_paniscus
ENSXCOG00000005312	frg1	100	64.341	ENSPPRG00000025003	-	100	64.341	Panthera_pardus
ENSXCOG00000005312	frg1	100	62.646	ENSPPRG00000019777	-	100	63.424	Panthera_pardus
ENSXCOG00000005312	frg1	100	63.035	ENSPTIG00000006566	-	100	63.813	Panthera_tigris_altaica
ENSXCOG00000005312	frg1	100	64.341	ENSPTIG00000006588	-	100	64.341	Panthera_tigris_altaica
ENSXCOG00000005312	frg1	100	64.341	ENSPTRG00000050205	-	100	64.341	Pan_troglodytes
ENSXCOG00000005312	frg1	96	56.327	ENSPTRG00000050204	-	100	56.327	Pan_troglodytes
ENSXCOG00000005312	frg1	96	57.143	ENSPTRG00000044710	-	100	57.143	Pan_troglodytes
ENSXCOG00000005312	frg1	88	54.202	ENSPTRG00000043123	-	94	53.942	Pan_troglodytes
ENSXCOG00000005312	frg1	100	64.341	ENSPTRG00000016671	-	100	64.341	Pan_troglodytes
ENSXCOG00000005312	frg1	95	53.659	ENSPTRG00000052363	-	94	59.406	Pan_troglodytes
ENSXCOG00000005312	frg1	69	61.017	ENSPANG00000031530	-	84	59.563	Papio_anubis
ENSXCOG00000005312	frg1	100	69.565	ENSPKIG00000024189	frg1	100	69.565	Paramormyrops_kingsleyae
ENSXCOG00000005312	frg1	85	73.239	ENSPSIG00000017971	-	82	73.239	Pelodiscus_sinensis
ENSXCOG00000005312	frg1	98	78.049	ENSPMGG00000019273	frg1	100	78.049	Periophthalmus_magnuspinnatus
ENSXCOG00000005312	frg1	100	64.729	ENSPEMG00000000650	Frg1	100	64.729	Peromyscus_maniculatus_bairdii
ENSXCOG00000005312	frg1	100	65.116	ENSPCIG00000007530	-	69	65.251	Phascolarctos_cinereus
ENSXCOG00000005312	frg1	100	88.123	ENSPFOG00000006721	frg1	100	90.588	Poecilia_formosa
ENSXCOG00000005312	frg1	100	88.123	ENSPMEG00000013816	frg1	100	90.588	Poecilia_mexicana
ENSXCOG00000005312	frg1	100	87.739	ENSPREG00000000097	frg1	100	88.123	Poecilia_reticulata
ENSXCOG00000005312	frg1	57	71.034	ENSPPYG00000029810	-	100	71.034	Pongo_abelii
ENSXCOG00000005312	frg1	63	64.557	ENSPPYG00000011275	-	87	64.557	Pongo_abelii
ENSXCOG00000005312	frg1	95	61.789	ENSPCAG00000014953	-	100	61.789	Procavia_capensis
ENSXCOG00000005312	frg1	79	51.961	ENSPCOG00000022726	FRG1	95	51.961	Propithecus_coquereli
ENSXCOG00000005312	frg1	100	50.775	ENSPVAG00000010551	FRG1	100	50.775	Pteropus_vampyrus
ENSXCOG00000005312	frg1	68	86.628	ENSPNYG00000015209	frg1	74	86.628	Pundamilia_nyererei
ENSXCOG00000005312	frg1	100	78.346	ENSPNAG00000013259	frg1	100	78.346	Pygocentrus_nattereri
ENSXCOG00000005312	frg1	100	64.341	ENSRNOG00000009846	Frg1	100	64.341	Rattus_norvegicus
ENSXCOG00000005312	frg1	88	62.445	ENSRBIG00000042219	-	96	62.445	Rhinopithecus_bieti
ENSXCOG00000005312	frg1	100	62.791	ENSRROG00000015523	FRG1	100	62.791	Rhinopithecus_roxellana
ENSXCOG00000005312	frg1	98	59.274	ENSRROG00000032084	-	97	59.274	Rhinopithecus_roxellana
ENSXCOG00000005312	frg1	100	64.591	ENSSBOG00000034175	FRG1	100	65.370	Saimiri_boliviensis_boliviensis
ENSXCOG00000005312	frg1	100	65.504	ENSSHAG00000005886	-	100	65.637	Sarcophilus_harrisii
ENSXCOG00000005312	frg1	97	70.968	ENSSFOG00015021361	frg1	99	71.774	Scleropages_formosus
ENSXCOG00000005312	frg1	84	83.962	ENSSMAG00000001213	frg1	100	76.471	Scophthalmus_maximus
ENSXCOG00000005312	frg1	100	81.176	ENSSDUG00000018886	frg1	100	81.176	Seriola_dumerili
ENSXCOG00000005312	frg1	100	80.784	ENSSLDG00000024191	frg1	100	80.784	Seriola_lalandi_dorsalis
ENSXCOG00000005312	frg1	65	70.303	ENSSARG00000002471	-	88	70.303	Sorex_araneus
ENSXCOG00000005312	frg1	100	68.651	ENSSPUG00000017326	-	100	68.651	Sphenodon_punctatus
ENSXCOG00000005312	frg1	100	80.632	ENSSPAG00000013294	frg1	100	80.632	Stegastes_partitus
ENSXCOG00000005312	frg1	100	65.116	ENSSSCG00000006996	FRG1	100	65.116	Sus_scrofa
ENSXCOG00000005312	frg1	100	66.797	ENSTGUG00000007028	-	100	66.797	Taeniopygia_guttata
ENSXCOG00000005312	frg1	100	78.039	ENSTRUG00000016208	frg1	100	78.039	Takifugu_rubripes
ENSXCOG00000005312	frg1	100	77.255	ENSTNIG00000007128	frg1	100	77.255	Tetraodon_nigroviridis
ENSXCOG00000005312	frg1	100	63.953	ENSTBEG00000014491	-	100	63.985	Tupaia_belangeri
ENSXCOG00000005312	frg1	79	44.444	ENSTBEG00000017605	-	99	44.444	Tupaia_belangeri
ENSXCOG00000005312	frg1	84	49.763	ENSTBEG00000012789	-	99	49.763	Tupaia_belangeri
ENSXCOG00000005312	frg1	100	64.341	ENSTTRG00000003429	FRG1	100	64.341	Tursiops_truncatus
ENSXCOG00000005312	frg1	96	65.289	ENSUAMG00000012123	-	100	65.289	Ursus_americanus
ENSXCOG00000005312	frg1	100	64.729	ENSUMAG00000021119	FRG1	100	64.729	Ursus_maritimus
ENSXCOG00000005312	frg1	100	62.403	ENSVPAG00000000616	FRG1	100	62.403	Vicugna_pacos
ENSXCOG00000005312	frg1	85	70.561	ENSVPAG00000011977	-	90	70.561	Vicugna_pacos
ENSXCOG00000005312	frg1	84	70.755	ENSVVUG00000007181	-	77	70.755	Vulpes_vulpes
ENSXCOG00000005312	frg1	100	64.453	ENSXETG00000012470	frg1	100	65.234	Xenopus_tropicalis
ENSXCOG00000005312	frg1	100	100.000	ENSXMAG00000007751	frg1	100	100.000	Xiphophorus_maculatus