EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000005323 (Gene tree)
Gene ID: -
Gene Symbol: hbs1l
Alias: wu:fc23c07|zgc:55400
Full Name: HBS1-like translational GTPase
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 25507 bases
Position: chrKQ557207.1:13003689-13029195
Accession: ZDB-GENE-030131-2987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000006885	GTP_EFTU	PF00009.27	8.6e-48	1	1
ENSXCOP00000006885	MMR_HSR1	PF01926.23	2.7e-06	1	1
ENSXCOP00000006885	GTP_EFTU_D2	PF03144.25	1.1e-08	1	1
ENSXCOP00000006885	GTP_EFTU_D3	PF03143.17	5.8e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000006973	-	2040	-	ENSXCOP00000006885	679 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000005323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000005323's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000005323	hbs1l	62	41.935	ENSXCOG00000013395	-	94	41.935
ENSXCOG00000005323	hbs1l	63	39.052	ENSXCOG00000012296	si:dkey-37o8.1	96	39.052
ENSXCOG00000005323	hbs1l	62	40.706	ENSXCOG00000003084	-	95	36.791
ENSXCOG00000005323	hbs1l	61	38.164	ENSXCOG00000016099	gspt1l	83	38.129
ENSXCOG00000005323	hbs1l	62	41.475	ENSXCOG00000011374	EEF1A1	94	41.475
ENSXCOG00000005323	hbs1l	63	42.105	ENSXCOG00000001542	-	84	56.410
ENSXCOG00000005323	hbs1l	56	40.306	ENSXCOG00000013465	eef1a1b	95	40.306

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000005323	hbs1l	100	73.723	ENSG00000112339	HBS1L	95	86.335	Homo_sapiens
ENSXCOG00000005323	hbs1l	81	94.370	ENSAPOG00000013169	hbs1l	91	94.370	Acanthochromis_polyacanthus
ENSXCOG00000005323	hbs1l	99	73.830	ENSAMEG00000009749	HBS1L	99	73.362	Ailuropoda_melanoleuca
ENSXCOG00000005323	hbs1l	79	89.777	ENSACIG00000017087	hbs1l	91	89.777	Amphilophus_citrinellus
ENSXCOG00000005323	hbs1l	100	88.522	ENSAPEG00000008320	hbs1l	99	88.522	Amphiprion_percula
ENSXCOG00000005323	hbs1l	100	85.491	ENSATEG00000004459	hbs1l	99	85.491	Anabas_testudineus
ENSXCOG00000005323	hbs1l	98	71.196	ENSAPLG00000007791	HBS1L	99	70.606	Anas_platyrhynchos
ENSXCOG00000005323	hbs1l	100	72.052	ENSACAG00000010120	HBS1L	99	72.052	Anolis_carolinensis
ENSXCOG00000005323	hbs1l	100	73.324	ENSANAG00000038076	HBS1L	99	73.538	Aotus_nancymaae
ENSXCOG00000005323	hbs1l	100	85.755	ENSACLG00000010469	hbs1l	99	85.755	Astatotilapia_calliptera
ENSXCOG00000005323	hbs1l	100	79.565	ENSAMXG00000004260	hbs1l	97	84.730	Astyanax_mexicanus
ENSXCOG00000005323	hbs1l	100	74.052	ENSBTAG00000020174	HBS1L	99	73.469	Bos_taurus
ENSXCOG00000005323	hbs1l	63	49.423	WBGene00010622	K07A12.4	72	49.306	Caenorhabditis_elegans
ENSXCOG00000005323	hbs1l	100	73.761	ENSCJAG00000007678	HBS1L	99	73.977	Callithrix_jacchus
ENSXCOG00000005323	hbs1l	100	72.555	ENSCAFG00000000226	HBS1L	99	72.238	Canis_familiaris
ENSXCOG00000005323	hbs1l	100	72.555	ENSCAFG00020021904	HBS1L	99	72.238	Canis_lupus_dingo
ENSXCOG00000005323	hbs1l	100	73.761	ENSCHIG00000010299	HBS1L	99	73.353	Capra_hircus
ENSXCOG00000005323	hbs1l	100	71.512	ENSTSYG00000007089	HBS1L	99	71.076	Carlito_syrichta
ENSXCOG00000005323	hbs1l	99	64.474	ENSCPOG00000007015	HBS1L	99	64.181	Cavia_porcellus
ENSXCOG00000005323	hbs1l	99	72.368	ENSCCAG00000033863	HBS1L	99	74.204	Cebus_capucinus
ENSXCOG00000005323	hbs1l	100	73.043	ENSCATG00000043042	HBS1L	99	73.043	Cercocebus_atys
ENSXCOG00000005323	hbs1l	100	72.279	ENSCLAG00000004937	HBS1L	99	72.052	Chinchilla_lanigera
ENSXCOG00000005323	hbs1l	99	73.110	ENSCSAG00000016791	HBS1L	99	73.110	Chlorocebus_sabaeus
ENSXCOG00000005323	hbs1l	97	57.721	ENSCHOG00000001852	HBS1L	99	56.825	Choloepus_hoffmanni
ENSXCOG00000005323	hbs1l	100	71.866	ENSCPBG00000017635	HBS1L	99	71.866	Chrysemys_picta_bellii
ENSXCOG00000005323	hbs1l	99	49.028	ENSCING00000005592	-	99	49.028	Ciona_intestinalis
ENSXCOG00000005323	hbs1l	99	49.782	ENSCSAVG00000002297	-	99	60.741	Ciona_savignyi
ENSXCOG00000005323	hbs1l	100	72.464	ENSCANG00000031208	HBS1L	99	72.464	Colobus_angolensis_palliatus
ENSXCOG00000005323	hbs1l	100	73.654	ENSCGRG00001024531	Hbs1l	99	72.926	Cricetulus_griseus_chok1gshd
ENSXCOG00000005323	hbs1l	100	73.654	ENSCGRG00000017361	Hbs1l	99	72.926	Cricetulus_griseus_crigri
ENSXCOG00000005323	hbs1l	100	84.188	ENSCSEG00000002794	hbs1l	94	83.618	Cynoglossus_semilaevis
ENSXCOG00000005323	hbs1l	100	89.444	ENSCVAG00000001462	hbs1l	99	89.444	Cyprinodon_variegatus
ENSXCOG00000005323	hbs1l	100	80.261	ENSDARG00000036778	hbs1l	99	80.261	Danio_rerio
ENSXCOG00000005323	hbs1l	100	72.807	ENSDORG00000005958	Hbs1l	99	72.807	Dipodomys_ordii
ENSXCOG00000005323	hbs1l	100	48.519	FBgn0042712	HBS1	100	48.936	Drosophila_melanogaster
ENSXCOG00000005323	hbs1l	100	67.930	ENSETEG00000000913	HBS1L	99	67.055	Echinops_telfairi
ENSXCOG00000005323	hbs1l	100	58.651	ENSEBUG00000010759	hbs1l	100	63.819	Eptatretus_burgeri
ENSXCOG00000005323	hbs1l	100	73.004	ENSEASG00005011148	HBS1L	99	71.948	Equus_asinus_asinus
ENSXCOG00000005323	hbs1l	100	72.714	ENSECAG00000004470	HBS1L	99	71.948	Equus_caballus
ENSXCOG00000005323	hbs1l	100	68.705	ENSEEUG00000013582	HBS1L	99	68.559	Erinaceus_europaeus
ENSXCOG00000005323	hbs1l	71	76.240	ENSELUG00000006444	hbs1l	96	67.093	Esox_lucius
ENSXCOG00000005323	hbs1l	100	73.285	ENSFCAG00000001810	HBS1L	99	79.576	Felis_catus
ENSXCOG00000005323	hbs1l	87	73.322	ENSFALG00000011898	HBS1L	99	73.322	Ficedula_albicollis
ENSXCOG00000005323	hbs1l	100	72.424	ENSFDAG00000011841	HBS1L	99	72.134	Fukomys_damarensis
ENSXCOG00000005323	hbs1l	100	90.585	ENSFHEG00000006942	hbs1l	99	90.585	Fundulus_heteroclitus
ENSXCOG00000005323	hbs1l	99	81.176	ENSGMOG00000011843	hbs1l	99	81.176	Gadus_morhua
ENSXCOG00000005323	hbs1l	100	73.004	ENSGALG00000013962	HBS1L	99	71.843	Gallus_gallus
ENSXCOG00000005323	hbs1l	100	95.292	ENSGAFG00000004157	hbs1l	99	95.292	Gambusia_affinis
ENSXCOG00000005323	hbs1l	100	85.965	ENSGACG00000011035	hbs1l	100	86.111	Gasterosteus_aculeatus
ENSXCOG00000005323	hbs1l	100	71.179	ENSGAGG00000002033	HBS1L	99	70.392	Gopherus_agassizii
ENSXCOG00000005323	hbs1l	79	74.074	ENSGGOG00000034956	-	93	83.333	Gorilla_gorilla
ENSXCOG00000005323	hbs1l	100	85.897	ENSHBUG00000013424	hbs1l	99	85.897	Haplochromis_burtoni
ENSXCOG00000005323	hbs1l	100	72.198	ENSHGLG00000000516	HBS1L	99	71.223	Heterocephalus_glaber_female
ENSXCOG00000005323	hbs1l	100	72.198	ENSHGLG00100003550	HBS1L	99	71.223	Heterocephalus_glaber_male
ENSXCOG00000005323	hbs1l	100	83.141	ENSHCOG00000007581	hbs1l	94	82.148	Hippocampus_comes
ENSXCOG00000005323	hbs1l	100	79.736	ENSIPUG00000010748	hbs1l	99	79.148	Ictalurus_punctatus
ENSXCOG00000005323	hbs1l	100	73.362	ENSSTOG00000007551	HBS1L	99	72.741	Ictidomys_tridecemlineatus
ENSXCOG00000005323	hbs1l	100	56.522	ENSJJAG00000012660	-	99	55.571	Jaculus_jaculus
ENSXCOG00000005323	hbs1l	99	70.742	ENSJJAG00000017024	-	97	70.949	Jaculus_jaculus
ENSXCOG00000005323	hbs1l	100	87.874	ENSKMAG00000012130	hbs1l	99	88.160	Kryptolebias_marmoratus
ENSXCOG00000005323	hbs1l	100	85.877	ENSLBEG00000002784	hbs1l	99	86.163	Labrus_bergylta
ENSXCOG00000005323	hbs1l	72	77.189	ENSLACG00000004528	HBS1L	99	77.189	Latimeria_chalumnae
ENSXCOG00000005323	hbs1l	100	73.833	ENSLOCG00000016221	hbs1l	99	73.833	Lepisosteus_oculatus
ENSXCOG00000005323	hbs1l	100	70.785	ENSLAFG00000007835	HBS1L	100	70.657	Loxodonta_africana
ENSXCOG00000005323	hbs1l	100	73.043	ENSMFAG00000003766	HBS1L	99	73.043	Macaca_fascicularis
ENSXCOG00000005323	hbs1l	100	69.795	ENSMMUG00000004802	HBS1L	98	77.901	Macaca_mulatta
ENSXCOG00000005323	hbs1l	100	73.043	ENSMNEG00000043942	HBS1L	99	73.043	Macaca_nemestrina
ENSXCOG00000005323	hbs1l	99	73.538	ENSMLEG00000043218	HBS1L	98	73.538	Mandrillus_leucophaeus
ENSXCOG00000005323	hbs1l	100	84.900	ENSMAMG00000016498	hbs1l	99	84.758	Mastacembelus_armatus
ENSXCOG00000005323	hbs1l	79	89.572	ENSMZEG00005024018	-	90	89.572	Maylandia_zebra
ENSXCOG00000005323	hbs1l	100	85.755	ENSMZEG00005015575	hbs1l	99	85.755	Maylandia_zebra
ENSXCOG00000005323	hbs1l	99	71.637	ENSMGAG00000013065	HBS1L	99	71.199	Meleagris_gallopavo
ENSXCOG00000005323	hbs1l	100	73.869	ENSMAUG00000001077	Hbs1l	99	73.139	Mesocricetus_auratus
ENSXCOG00000005323	hbs1l	99	69.051	ENSMICG00000001533	-	99	69.781	Microcebus_murinus
ENSXCOG00000005323	hbs1l	100	61.953	ENSMICG00000030043	-	95	80.000	Microcebus_murinus
ENSXCOG00000005323	hbs1l	100	73.508	ENSMOCG00000023038	Hbs1l	99	72.780	Microtus_ochrogaster
ENSXCOG00000005323	hbs1l	97	86.758	ENSMMOG00000015507	hbs1l	99	86.758	Mola_mola
ENSXCOG00000005323	hbs1l	100	71.657	ENSMODG00000017499	HBS1L	99	71.449	Monodelphis_domestica
ENSXCOG00000005323	hbs1l	100	86.040	ENSMALG00000010768	hbs1l	99	86.040	Monopterus_albus
ENSXCOG00000005323	hbs1l	100	74.128	MGP_CAROLIEiJ_G0015162	Hbs1l	99	73.837	Mus_caroli
ENSXCOG00000005323	hbs1l	100	74.236	ENSMUSG00000019977	Hbs1l	100	93.548	Mus_musculus
ENSXCOG00000005323	hbs1l	100	73.983	MGP_PahariEiJ_G0023782	Hbs1l	99	73.837	Mus_pahari
ENSXCOG00000005323	hbs1l	100	74.273	MGP_SPRETEiJ_G0015970	Hbs1l	99	74.128	Mus_spretus
ENSXCOG00000005323	hbs1l	100	73.469	ENSMPUG00000014810	HBS1L	99	73.032	Mustela_putorius_furo
ENSXCOG00000005323	hbs1l	100	73.032	ENSMLUG00000010618	HBS1L	99	72.595	Myotis_lucifugus
ENSXCOG00000005323	hbs1l	100	72.303	ENSNGAG00000015184	Hbs1l	99	72.157	Nannospalax_galili
ENSXCOG00000005323	hbs1l	100	85.470	ENSNBRG00000020095	hbs1l	99	85.470	Neolamprologus_brichardi
ENSXCOG00000005323	hbs1l	100	72.701	ENSNLEG00000014721	HBS1L	99	72.489	Nomascus_leucogenys
ENSXCOG00000005323	hbs1l	82	82.741	ENSMEUG00000003907	HBS1L	81	82.741	Notamacropus_eugenii
ENSXCOG00000005323	hbs1l	78	79.167	ENSOPRG00000013595	HBS1L	71	82.609	Ochotona_princeps
ENSXCOG00000005323	hbs1l	99	72.807	ENSODEG00000008959	HBS1L	99	72.515	Octodon_degus
ENSXCOG00000005323	hbs1l	100	85.613	ENSONIG00000000460	hbs1l	99	85.127	Oreochromis_niloticus
ENSXCOG00000005323	hbs1l	100	71.512	ENSOANG00000002684	-	99	71.553	Ornithorhynchus_anatinus
ENSXCOG00000005323	hbs1l	99	69.489	ENSOCUG00000011619	HBS1L	99	71.026	Oryctolagus_cuniculus
ENSXCOG00000005323	hbs1l	100	82.739	ENSORLG00000016559	hbs1l	99	82.739	Oryzias_latipes
ENSXCOG00000005323	hbs1l	100	82.596	ENSORLG00020003827	hbs1l	99	82.596	Oryzias_latipes_hni
ENSXCOG00000005323	hbs1l	100	82.596	ENSORLG00015023105	hbs1l	99	82.596	Oryzias_latipes_hsok
ENSXCOG00000005323	hbs1l	100	83.738	ENSOMEG00000016715	hbs1l	99	83.738	Oryzias_melastigma
ENSXCOG00000005323	hbs1l	100	72.926	ENSOGAG00000012604	HBS1L	99	72.926	Otolemur_garnettii
ENSXCOG00000005323	hbs1l	100	73.615	ENSOARG00000005671	-	99	73.032	Ovis_aries
ENSXCOG00000005323	hbs1l	99	74.015	ENSOARG00000014798	-	99	73.431	Ovis_aries
ENSXCOG00000005323	hbs1l	100	73.869	ENSPPAG00000029900	HBS1L	99	73.869	Pan_paniscus
ENSXCOG00000005323	hbs1l	100	73.285	ENSPPRG00000005285	HBS1L	99	72.820	Panthera_pardus
ENSXCOG00000005323	hbs1l	100	73.285	ENSPTIG00000015803	HBS1L	99	72.820	Panthera_tigris_altaica
ENSXCOG00000005323	hbs1l	100	73.869	ENSPTRG00000018630	HBS1L	99	73.869	Pan_troglodytes
ENSXCOG00000005323	hbs1l	100	72.754	ENSPANG00000007075	HBS1L	99	72.754	Papio_anubis
ENSXCOG00000005323	hbs1l	99	79.545	ENSPKIG00000023171	hbs1l	99	74.453	Paramormyrops_kingsleyae
ENSXCOG00000005323	hbs1l	86	69.983	ENSPSIG00000016467	HBS1L	97	69.983	Pelodiscus_sinensis
ENSXCOG00000005323	hbs1l	99	85.081	ENSPMGG00000018051	hbs1l	96	91.489	Periophthalmus_magnuspinnatus
ENSXCOG00000005323	hbs1l	100	73.654	ENSPEMG00000014369	Hbs1l	99	72.926	Peromyscus_maniculatus_bairdii
ENSXCOG00000005323	hbs1l	100	64.818	ENSPMAG00000002516	hbs1l	99	64.380	Petromyzon_marinus
ENSXCOG00000005323	hbs1l	100	94.026	ENSPFOG00000021764	hbs1l	99	94.026	Poecilia_formosa
ENSXCOG00000005323	hbs1l	100	94.437	ENSPLAG00000006193	hbs1l	99	94.437	Poecilia_latipinna
ENSXCOG00000005323	hbs1l	100	94.722	ENSPMEG00000000925	hbs1l	99	94.722	Poecilia_mexicana
ENSXCOG00000005323	hbs1l	100	94.294	ENSPREG00000011270	hbs1l	99	94.294	Poecilia_reticulata
ENSXCOG00000005323	hbs1l	100	73.139	ENSPPYG00000017027	HBS1L	99	73.139	Pongo_abelii
ENSXCOG00000005323	hbs1l	88	77.407	ENSPCAG00000007002	HBS1L	79	77.407	Procavia_capensis
ENSXCOG00000005323	hbs1l	86	77.143	ENSPVAG00000015229	HBS1L	85	77.419	Pteropus_vampyrus
ENSXCOG00000005323	hbs1l	100	85.613	ENSPNYG00000013360	hbs1l	99	85.613	Pundamilia_nyererei
ENSXCOG00000005323	hbs1l	100	80.145	ENSPNAG00000026721	hbs1l	99	80.000	Pygocentrus_nattereri
ENSXCOG00000005323	hbs1l	100	74.236	ENSRNOG00000014531	Hbs1l	99	74.090	Rattus_norvegicus
ENSXCOG00000005323	hbs1l	100	72.899	ENSRBIG00000004484	HBS1L	99	72.899	Rhinopithecus_bieti
ENSXCOG00000005323	hbs1l	100	72.754	ENSRROG00000026176	HBS1L	99	72.754	Rhinopithecus_roxellana
ENSXCOG00000005323	hbs1l	62	39.101	YKR084C	-	73	39.101	Saccharomyces_cerevisiae
ENSXCOG00000005323	hbs1l	100	65.452	ENSSBOG00000016930	-	98	78.075	Saimiri_boliviensis_boliviensis
ENSXCOG00000005323	hbs1l	100	73.324	ENSSBOG00000019696	-	99	73.538	Saimiri_boliviensis_boliviensis
ENSXCOG00000005323	hbs1l	100	71.596	ENSSHAG00000013509	HBS1L	99	71.806	Sarcophilus_harrisii
ENSXCOG00000005323	hbs1l	100	76.023	ENSSFOG00015017544	hbs1l	96	76.023	Scleropages_formosus
ENSXCOG00000005323	hbs1l	100	83.333	ENSSMAG00000010621	hbs1l	99	83.618	Scophthalmus_maximus
ENSXCOG00000005323	hbs1l	100	86.610	ENSSDUG00000012974	hbs1l	99	86.610	Seriola_dumerili
ENSXCOG00000005323	hbs1l	100	85.897	ENSSLDG00000004960	hbs1l	99	85.897	Seriola_lalandi_dorsalis
ENSXCOG00000005323	hbs1l	98	72.048	ENSSARG00000006747	HBS1L	99	72.347	Sorex_araneus
ENSXCOG00000005323	hbs1l	99	70.949	ENSSPUG00000012389	HBS1L	99	71.241	Sphenodon_punctatus
ENSXCOG00000005323	hbs1l	97	73.565	ENSSSCG00000004169	HBS1L	100	72.642	Sus_scrofa
ENSXCOG00000005323	hbs1l	100	71.866	ENSTGUG00000011507	HBS1L	99	71.866	Taeniopygia_guttata
ENSXCOG00000005323	hbs1l	100	82.684	ENSTRUG00000016128	hbs1l	89	94.595	Takifugu_rubripes
ENSXCOG00000005323	hbs1l	99	86.892	ENSTNIG00000016320	hbs1l	99	86.892	Tetraodon_nigroviridis
ENSXCOG00000005323	hbs1l	100	67.299	ENSTBEG00000009950	HBS1L	99	67.299	Tupaia_belangeri
ENSXCOG00000005323	hbs1l	100	73.032	ENSTTRG00000003715	HBS1L	99	72.449	Tursiops_truncatus
ENSXCOG00000005323	hbs1l	100	73.869	ENSUAMG00000001064	HBS1L	99	73.401	Ursus_americanus
ENSXCOG00000005323	hbs1l	85	89.189	ENSUMAG00000024395	HBS1L	99	89.189	Ursus_maritimus
ENSXCOG00000005323	hbs1l	91	79.113	ENSVPAG00000006280	HBS1L	85	89.130	Vicugna_pacos
ENSXCOG00000005323	hbs1l	100	72.701	ENSVVUG00000000295	HBS1L	99	72.384	Vulpes_vulpes
ENSXCOG00000005323	hbs1l	100	71.159	ENSXETG00000003726	hbs1l	99	71.657	Xenopus_tropicalis
ENSXCOG00000005323	hbs1l	100	96.291	ENSXMAG00000004359	hbs1l	99	96.291	Xiphophorus_maculatus