EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000005364 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 8037 bases
Position: chrKQ557215.1:2281940-2289976
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000006936	FAM83	PF07894.12	3e-99	1	1
ENSXCOP00000006935	FAM83	PF07894.12	3.6e-99	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000007023	-	3600	-	ENSXCOP00000006935	1199 (aa)	-	-
ENSXCOT00000007024	-	3732	-	ENSXCOP00000006936	1243 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000005364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000005364's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000005364	-	96	36.019	ENSXCOG00000020106	fam83hb	99	35.445

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000005364	-	96	36.120	ENSAPOG00000009257	fam83hb	67	41.754	Acanthochromis_polyacanthus
ENSXCOG00000005364	-	96	65.780	ENSAPOG00000000745	-	78	59.701	Acanthochromis_polyacanthus
ENSXCOG00000005364	-	95	74.815	ENSACIG00000004226	-	58	74.815	Amphilophus_citrinellus
ENSXCOG00000005364	-	98	34.843	ENSACIG00000011141	fam83hb	99	35.164	Amphilophus_citrinellus
ENSXCOG00000005364	-	95	65.496	ENSAOCG00000004401	-	74	65.625	Amphiprion_ocellaris
ENSXCOG00000005364	-	96	37.003	ENSAOCG00000007284	fam83hb	99	36.606	Amphiprion_ocellaris
ENSXCOG00000005364	-	96	36.842	ENSAPEG00000012397	fam83hb	99	36.682	Amphiprion_percula
ENSXCOG00000005364	-	96	65.625	ENSAPEG00000024662	-	74	65.625	Amphiprion_percula
ENSXCOG00000005364	-	96	37.433	ENSATEG00000014310	fam83hb	63	43.711	Anabas_testudineus
ENSXCOG00000005364	-	70	39.490	ENSAPLG00000010481	FAM83H	75	39.490	Anas_platyrhynchos
ENSXCOG00000005364	-	57	41.374	ENSACAG00000001808	FAM83H	71	39.344	Anolis_carolinensis
ENSXCOG00000005364	-	96	36.957	ENSACLG00000017085	fam83hb	99	37.152	Astatotilapia_calliptera
ENSXCOG00000005364	-	96	60.261	ENSACLG00000021078	-	58	65.663	Astatotilapia_calliptera
ENSXCOG00000005364	-	64	46.106	ENSAMXG00000020626	fam83hb	69	45.087	Astyanax_mexicanus
ENSXCOG00000005364	-	96	38.189	ENSAMXG00000003637	-	99	37.818	Astyanax_mexicanus
ENSXCOG00000005364	-	79	38.327	ENSCPBG00000006321	FAM83H	86	38.089	Chrysemys_picta_bellii
ENSXCOG00000005364	-	96	36.667	ENSCSEG00000018065	fam83hb	99	35.606	Cynoglossus_semilaevis
ENSXCOG00000005364	-	96	51.144	ENSCSEG00000017411	-	99	55.692	Cynoglossus_semilaevis
ENSXCOG00000005364	-	96	37.273	ENSCVAG00000020763	fam83hb	99	36.950	Cyprinodon_variegatus
ENSXCOG00000005364	-	96	79.357	ENSCVAG00000004532	-	63	78.986	Cyprinodon_variegatus
ENSXCOG00000005364	-	63	45.967	ENSDARG00000060830	fam83hb	64	46.232	Danio_rerio
ENSXCOG00000005364	-	66	57.432	ENSEASG00005009670	FAM83H	79	57.432	Equus_asinus_asinus
ENSXCOG00000005364	-	67	54.110	ENSELUG00000021435	-	83	54.110	Esox_lucius
ENSXCOG00000005364	-	71	45.614	ENSELUG00000001087	fam83hb	76	45.614	Esox_lucius
ENSXCOG00000005364	-	68	41.667	ENSFALG00000008669	FAM83H	69	41.667	Ficedula_albicollis
ENSXCOG00000005364	-	96	37.068	ENSFHEG00000013522	fam83hb	70	40.107	Fundulus_heteroclitus
ENSXCOG00000005364	-	96	76.039	ENSFHEG00000019359	-	81	72.368	Fundulus_heteroclitus
ENSXCOG00000005364	-	68	44.167	ENSGALG00000033118	FAM83H	71	44.167	Gallus_gallus
ENSXCOG00000005364	-	96	94.079	ENSGAFG00000017827	-	84	94.079	Gambusia_affinis
ENSXCOG00000005364	-	96	37.062	ENSGAFG00000011105	fam83hb	80	41.509	Gambusia_affinis
ENSXCOG00000005364	-	96	60.261	ENSHBUG00000011170	-	59	65.663	Haplochromis_burtoni
ENSXCOG00000005364	-	96	36.491	ENSHBUG00000003140	fam83hb	99	36.908	Haplochromis_burtoni
ENSXCOG00000005364	-	96	37.628	ENSHCOG00000019264	fam83hb	70	41.121	Hippocampus_comes
ENSXCOG00000005364	-	94	62.687	ENSHCOG00000004219	-	81	62.687	Hippocampus_comes
ENSXCOG00000005364	-	65	44.521	ENSIPUG00000020131	fam83h	68	44.804	Ictalurus_punctatus
ENSXCOG00000005364	-	96	37.638	ENSKMAG00000006085	fam83hb	99	37.237	Kryptolebias_marmoratus
ENSXCOG00000005364	-	94	67.537	ENSKMAG00000008619	-	54	67.164	Kryptolebias_marmoratus
ENSXCOG00000005364	-	96	36.448	ENSLBEG00000003167	fam83hb	99	36.062	Labrus_bergylta
ENSXCOG00000005364	-	85	61.847	ENSLBEG00000017805	-	75	58.306	Labrus_bergylta
ENSXCOG00000005364	-	98	32.566	ENSLACG00000012784	FAM83H	97	33.015	Latimeria_chalumnae
ENSXCOG00000005364	-	75	43.593	ENSLOCG00000005513	fam83hb	82	43.303	Lepisosteus_oculatus
ENSXCOG00000005364	-	96	37.549	ENSMAMG00000013042	fam83hb	65	42.910	Mastacembelus_armatus
ENSXCOG00000005364	-	96	62.052	ENSMAMG00000015417	-	85	51.688	Mastacembelus_armatus
ENSXCOG00000005364	-	96	36.957	ENSMZEG00005004572	fam83hb	99	37.152	Maylandia_zebra
ENSXCOG00000005364	-	96	60.380	ENSMZEG00005011038	-	58	65.663	Maylandia_zebra
ENSXCOG00000005364	-	73	39.119	ENSMGAG00000013067	FAM83H	78	38.270	Meleagris_gallopavo
ENSXCOG00000005364	-	68	37.383	ENSMICG00000009499	FAM83H	54	59.122	Microcebus_murinus
ENSXCOG00000005364	-	75	77.551	ENSMMOG00000008508	-	82	77.570	Mola_mola
ENSXCOG00000005364	-	96	36.081	ENSMMOG00000019073	fam83hb	100	34.204	Mola_mola
ENSXCOG00000005364	-	72	39.207	ENSMALG00000014368	fam83hb	73	38.713	Monopterus_albus
ENSXCOG00000005364	-	96	50.040	ENSMALG00000007504	-	100	49.067	Monopterus_albus
ENSXCOG00000005364	-	81	58.784	MGP_SPRETEiJ_G0020809	Fam83h	79	58.784	Mus_spretus
ENSXCOG00000005364	-	96	65.854	ENSNBRG00000016501	-	60	65.854	Neolamprologus_brichardi
ENSXCOG00000005364	-	96	40.860	ENSNBRG00000012168	fam83hb	97	44.354	Neolamprologus_brichardi
ENSXCOG00000005364	-	96	36.399	ENSONIG00000002496	fam83hb	99	36.985	Oreochromis_niloticus
ENSXCOG00000005364	-	67	66.779	ENSONIG00000010254	-	63	66.779	Oreochromis_niloticus
ENSXCOG00000005364	-	66	41.603	ENSORLG00000029070	fam83hb	74	40.649	Oryzias_latipes
ENSXCOG00000005364	-	77	69.474	ENSORLG00000029445	-	69	69.474	Oryzias_latipes
ENSXCOG00000005364	-	77	71.277	ENSORLG00020005552	-	69	71.277	Oryzias_latipes_hni
ENSXCOG00000005364	-	66	41.493	ENSORLG00020005821	fam83hb	69	42.019	Oryzias_latipes_hni
ENSXCOG00000005364	-	66	41.376	ENSORLG00015013524	fam83hb	65	43.140	Oryzias_latipes_hsok
ENSXCOG00000005364	-	75	73.404	ENSORLG00015020652	-	69	73.404	Oryzias_latipes_hsok
ENSXCOG00000005364	-	62	43.159	ENSOMEG00000000980	fam83hb	65	42.537	Oryzias_melastigma
ENSXCOG00000005364	-	86	62.958	ENSOMEG00000017183	-	69	62.958	Oryzias_melastigma
ENSXCOG00000005364	-	75	45.038	ENSPKIG00000021594	-	59	45.038	Paramormyrops_kingsleyae
ENSXCOG00000005364	-	63	46.015	ENSPKIG00000011416	fam83hb	72	43.681	Paramormyrops_kingsleyae
ENSXCOG00000005364	-	69	39.205	ENSPSIG00000003110	FAM83H	74	38.636	Pelodiscus_sinensis
ENSXCOG00000005364	-	98	33.591	ENSPMGG00000001766	fam83hb	76	42.342	Periophthalmus_magnuspinnatus
ENSXCOG00000005364	-	79	56.312	ENSPMGG00000022601	-	99	47.816	Periophthalmus_magnuspinnatus
ENSXCOG00000005364	-	54	58.305	ENSPCIG00000019007	FAM83H	51	58.305	Phascolarctos_cinereus
ENSXCOG00000005364	-	71	94.702	ENSPFOG00000013288	-	73	95.364	Poecilia_formosa
ENSXCOG00000005364	-	96	90.493	ENSPLAG00000022026	-	99	90.493	Poecilia_latipinna
ENSXCOG00000005364	-	96	93.201	ENSPMEG00000020860	-	81	91.447	Poecilia_mexicana
ENSXCOG00000005364	-	96	36.045	ENSPREG00000007242	fam83hb	69	38.445	Poecilia_reticulata
ENSXCOG00000005364	-	97	94.410	ENSPREG00000001508	-	81	94.410	Poecilia_reticulata
ENSXCOG00000005364	-	54	53.378	ENSPVAG00000005711	FAM83H	53	53.378	Pteropus_vampyrus
ENSXCOG00000005364	-	96	36.491	ENSPNYG00000010992	fam83hb	99	36.908	Pundamilia_nyererei
ENSXCOG00000005364	-	96	60.828	ENSPNYG00000012210	-	58	65.060	Pundamilia_nyererei
ENSXCOG00000005364	-	77	50.877	ENSPNAG00000007905	-	53	50.877	Pygocentrus_nattereri
ENSXCOG00000005364	-	68	44.734	ENSPNAG00000026242	fam83hb	69	45.741	Pygocentrus_nattereri
ENSXCOG00000005364	-	89	49.043	ENSRNOG00000030264	Fam83h	89	49.043	Rattus_norvegicus
ENSXCOG00000005364	-	55	58.644	ENSSHAG00000003316	FAM83H	54	58.644	Sarcophilus_harrisii
ENSXCOG00000005364	-	75	48.148	ENSSFOG00015007757	-	63	42.563	Scleropages_formosus
ENSXCOG00000005364	-	76	46.405	ENSSFOG00015020932	fam83h	78	44.694	Scleropages_formosus
ENSXCOG00000005364	-	96	63.059	ENSSMAG00000012479	-	74	63.059	Scophthalmus_maximus
ENSXCOG00000005364	-	96	36.778	ENSSMAG00000008612	fam83hb	77	41.667	Scophthalmus_maximus
ENSXCOG00000005364	-	96	62.651	ENSSDUG00000005051	-	76	62.651	Seriola_dumerili
ENSXCOG00000005364	-	96	37.500	ENSSDUG00000010634	fam83hb	99	36.968	Seriola_dumerili
ENSXCOG00000005364	-	96	55.643	ENSSLDG00000023360	-	99	57.092	Seriola_lalandi_dorsalis
ENSXCOG00000005364	-	96	37.568	ENSSLDG00000012462	fam83hb	99	37.258	Seriola_lalandi_dorsalis
ENSXCOG00000005364	-	72	43.972	ENSSPUG00000012746	FAM83H	78	43.972	Sphenodon_punctatus
ENSXCOG00000005364	-	96	36.521	ENSSPAG00000015180	fam83hb	80	42.240	Stegastes_partitus
ENSXCOG00000005364	-	96	64.628	ENSSPAG00000021937	-	71	64.508	Stegastes_partitus
ENSXCOG00000005364	-	59	39.096	ENSTGUG00000012789	FAM83H	73	38.594	Taeniopygia_guttata
ENSXCOG00000005364	-	96	36.090	ENSTRUG00000009193	fam83hb	68	55.396	Takifugu_rubripes
ENSXCOG00000005364	-	79	53.174	ENSTRUG00000024578	-	88	55.788	Takifugu_rubripes
ENSXCOG00000005364	-	55	38.080	ENSTTRG00000015190	FAM83H	66	36.526	Tursiops_truncatus
ENSXCOG00000005364	-	96	36.927	ENSXMAG00000003383	fam83hb	99	35.905	Xiphophorus_maculatus
ENSXCOG00000005364	-	96	99.258	ENSXMAG00000026782	-	82	98.026	Xiphophorus_maculatus