EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000005498 (Gene tree)
Gene ID: -
Gene Symbol: dkc1
Alias: fc87a02|fi24a05|fv62a07|wu:fa28f10|wu:fc87a02|wu:fi24a05|wu:fv62a07|zgc:110395
Full Name: dyskeratosis congenita 1%2C dyskerin
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 5708 bases
Position: chrKQ557211.1:25873760-25879467
Accession: ZDB-GENE-031118-120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000007110	TruB_N	PF01509.18	7.9e-22	1	1
ENSXCOP00000007110	PUA	PF01472.20	9.9e-17	1	1
ENSXCOP00000007110	DKCLD	PF08068.12	3.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000007200	-	1404	-	ENSXCOP00000007110	467 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000005498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000005498's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000005498	dkc1	92	79.638	ENSG00000130826	DKC1	99	87.864	Homo_sapiens
ENSXCOG00000005498	dkc1	92	90.046	ENSAPOG00000007799	dkc1	86	89.703	Acanthochromis_polyacanthus
ENSXCOG00000005498	dkc1	91	80.778	ENSAMEG00000002776	DKC1	86	80.778	Ailuropoda_melanoleuca
ENSXCOG00000005498	dkc1	92	90.000	ENSACIG00000022614	dkc1	88	89.679	Amphilophus_citrinellus
ENSXCOG00000005498	dkc1	99	88.699	ENSAOCG00000013159	dkc1	88	90.115	Amphiprion_ocellaris
ENSXCOG00000005498	dkc1	99	88.699	ENSAPEG00000002284	dkc1	88	90.115	Amphiprion_percula
ENSXCOG00000005498	dkc1	93	87.613	ENSATEG00000013682	dkc1	87	87.640	Anabas_testudineus
ENSXCOG00000005498	dkc1	92	82.609	ENSACAG00000015600	DKC1	75	82.380	Anolis_carolinensis
ENSXCOG00000005498	dkc1	92	79.864	ENSANAG00000022732	DKC1	86	79.864	Aotus_nancymaae
ENSXCOG00000005498	dkc1	100	86.864	ENSACLG00000015605	dkc1	82	94.514	Astatotilapia_calliptera
ENSXCOG00000005498	dkc1	93	86.667	ENSAMXG00000017108	dkc1	86	86.270	Astyanax_mexicanus
ENSXCOG00000005498	dkc1	91	80.365	ENSBTAG00000013045	DKC1	88	79.505	Bos_taurus
ENSXCOG00000005498	dkc1	84	65.394	WBGene00010478	K01G5.5	89	64.987	Caenorhabditis_elegans
ENSXCOG00000005498	dkc1	92	79.819	ENSCJAG00000004210	DKC1	85	79.819	Callithrix_jacchus
ENSXCOG00000005498	dkc1	95	71.106	ENSCAFG00000009311	-	79	75.990	Canis_familiaris
ENSXCOG00000005498	dkc1	95	77.827	ENSCAFG00000019620	-	77	85.354	Canis_familiaris
ENSXCOG00000005498	dkc1	95	77.827	ENSCAFG00020008918	-	77	85.354	Canis_lupus_dingo
ENSXCOG00000005498	dkc1	87	75.000	ENSCAFG00020009379	-	76	75.000	Canis_lupus_dingo
ENSXCOG00000005498	dkc1	91	80.365	ENSCHIG00000017392	DKC1	88	79.505	Capra_hircus
ENSXCOG00000005498	dkc1	99	76.559	ENSTSYG00000007681	DKC1	86	78.049	Carlito_syrichta
ENSXCOG00000005498	dkc1	84	82.382	ENSCAPG00000003342	DKC1	91	82.382	Cavia_aperea
ENSXCOG00000005498	dkc1	91	80.822	ENSCPOG00000008825	DKC1	85	80.822	Cavia_porcellus
ENSXCOG00000005498	dkc1	99	67.857	ENSCCAG00000027418	DKC1	84	70.136	Cebus_capucinus
ENSXCOG00000005498	dkc1	92	79.592	ENSCATG00000033602	DKC1	86	79.592	Cercocebus_atys
ENSXCOG00000005498	dkc1	91	81.050	ENSCLAG00000000720	DKC1	86	81.050	Chinchilla_lanigera
ENSXCOG00000005498	dkc1	92	79.412	ENSCSAG00000006706	DKC1	86	79.412	Chlorocebus_sabaeus
ENSXCOG00000005498	dkc1	85	86.364	ENSCPBG00000005858	DKC1	85	86.364	Chrysemys_picta_bellii
ENSXCOG00000005498	dkc1	93	74.541	ENSCING00000004599	-	84	74.260	Ciona_intestinalis
ENSXCOG00000005498	dkc1	88	77.372	ENSCSAVG00000010047	-	89	79.345	Ciona_savignyi
ENSXCOG00000005498	dkc1	92	79.412	ENSCANG00000027987	DKC1	86	79.412	Colobus_angolensis_palliatus
ENSXCOG00000005498	dkc1	97	57.616	ENSCGRG00001016789	-	90	57.562	Cricetulus_griseus_chok1gshd
ENSXCOG00000005498	dkc1	92	80.543	ENSCGRG00001014574	-	86	80.543	Cricetulus_griseus_chok1gshd
ENSXCOG00000005498	dkc1	92	80.543	ENSCGRG00000016075	-	86	80.543	Cricetulus_griseus_crigri
ENSXCOG00000005498	dkc1	97	57.363	ENSCGRG00000014809	-	88	57.562	Cricetulus_griseus_crigri
ENSXCOG00000005498	dkc1	99	87.174	ENSCSEG00000012633	dkc1	91	87.872	Cynoglossus_semilaevis
ENSXCOG00000005498	dkc1	99	92.489	ENSCVAG00000010155	dkc1	91	92.275	Cyprinodon_variegatus
ENSXCOG00000005498	dkc1	85	91.709	ENSDARG00000016484	dkc1	86	85.747	Danio_rerio
ENSXCOG00000005498	dkc1	92	80.272	ENSDNOG00000004218	DKC1	86	80.272	Dasypus_novemcinctus
ENSXCOG00000005498	dkc1	59	71.119	ENSDORG00000013566	-	91	71.119	Dipodomys_ordii
ENSXCOG00000005498	dkc1	85	72.911	FBgn0259937	Nop60B	88	68.000	Drosophila_melanogaster
ENSXCOG00000005498	dkc1	85	84.091	ENSETEG00000016095	DKC1	80	84.091	Echinops_telfairi
ENSXCOG00000005498	dkc1	68	78.616	ENSEBUG00000015962	dkc1	98	80.412	Eptatretus_burgeri
ENSXCOG00000005498	dkc1	95	78.604	ENSEASG00005007484	DKC1	86	78.125	Equus_asinus_asinus
ENSXCOG00000005498	dkc1	99	76.407	ENSECAG00000023524	DKC1	86	78.125	Equus_caballus
ENSXCOG00000005498	dkc1	83	86.856	ENSEEUG00000003323	DKC1	91	86.856	Erinaceus_europaeus
ENSXCOG00000005498	dkc1	93	86.818	ENSELUG00000014538	dkc1	86	86.818	Esox_lucius
ENSXCOG00000005498	dkc1	85	86.111	ENSFCAG00000006577	DKC1	86	80.460	Felis_catus
ENSXCOG00000005498	dkc1	91	81.279	ENSFALG00000011496	DKC1	86	80.222	Ficedula_albicollis
ENSXCOG00000005498	dkc1	91	82.284	ENSFDAG00000002516	DKC1	88	81.379	Fukomys_damarensis
ENSXCOG00000005498	dkc1	92	92.558	ENSFHEG00000004627	dkc1	87	92.202	Fundulus_heteroclitus
ENSXCOG00000005498	dkc1	84	88.747	ENSGMOG00000017277	dkc1	100	88.747	Gadus_morhua
ENSXCOG00000005498	dkc1	90	83.023	ENSGALG00000005054	DKC1	86	81.166	Gallus_gallus
ENSXCOG00000005498	dkc1	100	95.522	ENSGAFG00000011486	dkc1	81	95.522	Gambusia_affinis
ENSXCOG00000005498	dkc1	85	92.965	ENSGACG00000004373	dkc1	96	93.617	Gasterosteus_aculeatus
ENSXCOG00000005498	dkc1	91	82.217	ENSGAGG00000011330	DKC1	84	82.217	Gopherus_agassizii
ENSXCOG00000005498	dkc1	92	79.638	ENSGGOG00000001045	DKC1	86	79.638	Gorilla_gorilla
ENSXCOG00000005498	dkc1	99	88.197	ENSHBUG00000012436	dkc1	87	89.908	Haplochromis_burtoni
ENSXCOG00000005498	dkc1	85	85.354	ENSHGLG00000000649	DKC1	85	79.271	Heterocephalus_glaber_female
ENSXCOG00000005498	dkc1	85	85.354	ENSHGLG00100001153	DKC1	86	79.271	Heterocephalus_glaber_male
ENSXCOG00000005498	dkc1	99	86.207	ENSHCOG00000021099	dkc1	86	88.657	Hippocampus_comes
ENSXCOG00000005498	dkc1	92	84.738	ENSIPUG00000010309	dkc1	86	83.820	Ictalurus_punctatus
ENSXCOG00000005498	dkc1	92	73.843	ENSSTOG00000020149	-	85	73.843	Ictidomys_tridecemlineatus
ENSXCOG00000005498	dkc1	92	79.910	ENSSTOG00000001074	-	91	79.910	Ictidomys_tridecemlineatus
ENSXCOG00000005498	dkc1	92	69.144	ENSSTOG00000011904	-	82	69.144	Ictidomys_tridecemlineatus
ENSXCOG00000005498	dkc1	60	71.583	ENSJJAG00000010086	-	93	71.429	Jaculus_jaculus
ENSXCOG00000005498	dkc1	92	88.605	ENSKMAG00000008010	dkc1	87	87.414	Kryptolebias_marmoratus
ENSXCOG00000005498	dkc1	91	89.930	ENSLBEG00000019122	dkc1	90	89.245	Labrus_bergylta
ENSXCOG00000005498	dkc1	93	79.773	ENSLACG00000014025	DKC1	91	85.965	Latimeria_chalumnae
ENSXCOG00000005498	dkc1	93	87.156	ENSLOCG00000013713	dkc1	88	88.443	Lepisosteus_oculatus
ENSXCOG00000005498	dkc1	91	79.638	ENSLAFG00000000221	DKC1	87	78.795	Loxodonta_africana
ENSXCOG00000005498	dkc1	92	79.684	ENSMFAG00000032398	DKC1	74	79.684	Macaca_fascicularis
ENSXCOG00000005498	dkc1	92	79.412	ENSMMUG00000005768	DKC1	86	79.412	Macaca_mulatta
ENSXCOG00000005498	dkc1	92	79.412	ENSMNEG00000034503	DKC1	86	79.412	Macaca_nemestrina
ENSXCOG00000005498	dkc1	92	79.412	ENSMLEG00000034422	DKC1	86	79.412	Mandrillus_leucophaeus
ENSXCOG00000005498	dkc1	86	94.789	ENSMAMG00000005427	dkc1	90	94.789	Mastacembelus_armatus
ENSXCOG00000005498	dkc1	99	88.412	ENSMZEG00005014503	dkc1	87	90.138	Maylandia_zebra
ENSXCOG00000005498	dkc1	78	89.807	ENSMGAG00000009238	DKC1	89	82.524	Meleagris_gallopavo
ENSXCOG00000005498	dkc1	59	71.119	ENSMAUG00000016454	-	91	71.119	Mesocricetus_auratus
ENSXCOG00000005498	dkc1	85	72.616	ENSMICG00000002818	-	99	75.890	Microcebus_murinus
ENSXCOG00000005498	dkc1	92	78.947	ENSMICG00000038751	-	87	78.947	Microcebus_murinus
ENSXCOG00000005498	dkc1	59	68.953	ENSMOCG00000001169	-	91	68.953	Microtus_ochrogaster
ENSXCOG00000005498	dkc1	86	92.750	ENSMMOG00000020348	dkc1	87	92.750	Mola_mola
ENSXCOG00000005498	dkc1	89	83.373	ENSMODG00000009243	DKC1	74	82.547	Monodelphis_domestica
ENSXCOG00000005498	dkc1	92	89.277	ENSMALG00000009454	dkc1	86	88.558	Monopterus_albus
ENSXCOG00000005498	dkc1	92	68.736	MGP_CAROLIEiJ_G0033191	Dkc1	88	80.620	Mus_caroli
ENSXCOG00000005498	dkc1	91	80.227	ENSMUSG00000031403	Dkc1	86	80.227	Mus_musculus
ENSXCOG00000005498	dkc1	91	80.549	MGP_PahariEiJ_G0031735	Dkc1	85	80.549	Mus_pahari
ENSXCOG00000005498	dkc1	91	80.227	MGP_SPRETEiJ_G0034351	Dkc1	86	80.227	Mus_spretus
ENSXCOG00000005498	dkc1	98	76.688	ENSMPUG00000016136	DKC1	73	85.606	Mustela_putorius_furo
ENSXCOG00000005498	dkc1	92	77.252	ENSMLUG00000011918	DKC1	85	77.252	Myotis_lucifugus
ENSXCOG00000005498	dkc1	59	71.480	ENSNGAG00000015724	-	92	71.480	Nannospalax_galili
ENSXCOG00000005498	dkc1	85	95.477	ENSNBRG00000005638	dkc1	81	95.262	Neolamprologus_brichardi
ENSXCOG00000005498	dkc1	92	78.959	ENSNLEG00000014323	DKC1	86	78.959	Nomascus_leucogenys
ENSXCOG00000005498	dkc1	85	82.323	ENSMEUG00000001066	DKC1	87	82.323	Notamacropus_eugenii
ENSXCOG00000005498	dkc1	75	79.023	ENSOPRG00000005248	DKC1	69	79.023	Ochotona_princeps
ENSXCOG00000005498	dkc1	59	71.119	ENSODEG00000000549	-	91	71.119	Octodon_degus
ENSXCOG00000005498	dkc1	85	87.121	ENSODEG00000011816	-	86	81.735	Octodon_degus
ENSXCOG00000005498	dkc1	92	91.628	ENSONIG00000013889	dkc1	87	91.055	Oreochromis_niloticus
ENSXCOG00000005498	dkc1	90	82.243	ENSOANG00000008713	-	90	81.881	Ornithorhynchus_anatinus
ENSXCOG00000005498	dkc1	60	63.816	ENSOANG00000022295	-	86	63.107	Ornithorhynchus_anatinus
ENSXCOG00000005498	dkc1	92	79.138	ENSOCUG00000012646	DKC1	86	79.138	Oryctolagus_cuniculus
ENSXCOG00000005498	dkc1	97	87.417	ENSORLG00000018748	dkc1	85	87.760	Oryzias_latipes
ENSXCOG00000005498	dkc1	92	87.646	ENSOMEG00000005786	dkc1	83	88.843	Oryzias_melastigma
ENSXCOG00000005498	dkc1	99	76.458	ENSOGAG00000003399	DKC1	86	77.827	Otolemur_garnettii
ENSXCOG00000005498	dkc1	91	80.822	ENSOARG00000003047	DKC1	88	79.730	Ovis_aries
ENSXCOG00000005498	dkc1	85	85.859	ENSPPAG00000023820	DKC1	86	79.864	Pan_paniscus
ENSXCOG00000005498	dkc1	85	86.111	ENSPPRG00000009104	DKC1	86	80.460	Panthera_pardus
ENSXCOG00000005498	dkc1	91	82.033	ENSPTIG00000017469	DKC1	85	82.033	Panthera_tigris_altaica
ENSXCOG00000005498	dkc1	92	79.638	ENSPTRG00000022449	DKC1	86	79.638	Pan_troglodytes
ENSXCOG00000005498	dkc1	92	79.638	ENSPTRG00000043416	-	74	79.638	Pan_troglodytes
ENSXCOG00000005498	dkc1	92	79.412	ENSPANG00000011978	DKC1	86	79.412	Papio_anubis
ENSXCOG00000005498	dkc1	93	86.468	ENSPKIG00000008443	dkc1	92	86.468	Paramormyrops_kingsleyae
ENSXCOG00000005498	dkc1	77	89.106	ENSPSIG00000013765	DKC1	86	89.356	Pelodiscus_sinensis
ENSXCOG00000005498	dkc1	99	75.813	ENSPMGG00000004097	dkc1	83	79.560	Periophthalmus_magnuspinnatus
ENSXCOG00000005498	dkc1	67	84.302	ENSPEMG00000013348	Dkc1	83	84.302	Peromyscus_maniculatus_bairdii
ENSXCOG00000005498	dkc1	85	86.364	ENSPCIG00000016706	DKC1	72	81.860	Phascolarctos_cinereus
ENSXCOG00000005498	dkc1	93	95.632	ENSPFOG00000018653	dkc1	94	94.456	Poecilia_formosa
ENSXCOG00000005498	dkc1	93	95.632	ENSPLAG00000003272	dkc1	85	94.456	Poecilia_latipinna
ENSXCOG00000005498	dkc1	93	95.172	ENSPMEG00000010413	dkc1	93	94.231	Poecilia_mexicana
ENSXCOG00000005498	dkc1	100	97.665	ENSPREG00000004100	dkc1	92	97.665	Poecilia_reticulata
ENSXCOG00000005498	dkc1	92	79.638	ENSPPYG00000020892	DKC1	86	79.638	Pongo_abelii
ENSXCOG00000005498	dkc1	78	86.740	ENSPCAG00000015034	DKC1	71	86.740	Procavia_capensis
ENSXCOG00000005498	dkc1	96	77.538	ENSPCOG00000026874	DKC1	86	79.186	Propithecus_coquereli
ENSXCOG00000005498	dkc1	92	80.742	ENSPVAG00000009222	DKC1	86	80.742	Pteropus_vampyrus
ENSXCOG00000005498	dkc1	99	87.002	ENSPNYG00000020063	dkc1	89	88.641	Pundamilia_nyererei
ENSXCOG00000005498	dkc1	93	86.239	ENSPNAG00000005780	dkc1	87	86.270	Pygocentrus_nattereri
ENSXCOG00000005498	dkc1	92	77.376	ENSRNOG00000055562	Dkc1	86	77.376	Rattus_norvegicus
ENSXCOG00000005498	dkc1	92	79.412	ENSRBIG00000028457	DKC1	74	79.412	Rhinopithecus_bieti
ENSXCOG00000005498	dkc1	92	79.412	ENSRROG00000044780	DKC1	86	79.412	Rhinopithecus_roxellana
ENSXCOG00000005498	dkc1	82	70.757	YLR175W	-	85	66.587	Saccharomyces_cerevisiae
ENSXCOG00000005498	dkc1	92	79.638	ENSSBOG00000033746	DKC1	85	79.638	Saimiri_boliviensis_boliviensis
ENSXCOG00000005498	dkc1	97	77.925	ENSSHAG00000002463	DKC1	93	80.455	Sarcophilus_harrisii
ENSXCOG00000005498	dkc1	92	85.057	ENSSFOG00015009585	dkc1	86	84.703	Scleropages_formosus
ENSXCOG00000005498	dkc1	93	85.616	ENSSMAG00000002552	dkc1	86	85.649	Scophthalmus_maximus
ENSXCOG00000005498	dkc1	97	89.207	ENSSDUG00000009963	dkc1	87	89.703	Seriola_dumerili
ENSXCOG00000005498	dkc1	98	88.596	ENSSLDG00000019342	dkc1	88	89.245	Seriola_lalandi_dorsalis
ENSXCOG00000005498	dkc1	85	81.658	ENSSARG00000001822	DKC1	88	76.818	Sorex_araneus
ENSXCOG00000005498	dkc1	85	86.111	ENSSPUG00000018907	DKC1	87	78.289	Sphenodon_punctatus
ENSXCOG00000005498	dkc1	93	90.762	ENSSPAG00000002585	dkc1	83	90.367	Stegastes_partitus
ENSXCOG00000005498	dkc1	91	81.412	ENSSSCG00000012823	DKC1	84	85.250	Sus_scrofa
ENSXCOG00000005498	dkc1	84	85.176	ENSTGUG00000006781	DKC1	89	82.968	Taeniopygia_guttata
ENSXCOG00000005498	dkc1	92	88.372	ENSTRUG00000004413	dkc1	86	88.372	Takifugu_rubripes
ENSXCOG00000005498	dkc1	92	71.171	ENSTNIG00000002582	dkc1	87	70.852	Tetraodon_nigroviridis
ENSXCOG00000005498	dkc1	58	86.617	ENSTBEG00000011262	DKC1	85	78.964	Tupaia_belangeri
ENSXCOG00000005498	dkc1	59	85.560	ENSTTRG00000008089	DKC1	55	85.560	Tursiops_truncatus
ENSXCOG00000005498	dkc1	91	80.615	ENSUAMG00000022721	DKC1	83	85.354	Ursus_americanus
ENSXCOG00000005498	dkc1	91	80.516	ENSUMAG00000016899	DKC1	93	86.807	Ursus_maritimus
ENSXCOG00000005498	dkc1	85	83.871	ENSVVUG00000020734	-	69	83.871	Vulpes_vulpes
ENSXCOG00000005498	dkc1	87	70.123	ENSVVUG00000021671	-	75	70.123	Vulpes_vulpes
ENSXCOG00000005498	dkc1	99	80.562	ENSXETG00000032517	DKC1	85	85.047	Xenopus_tropicalis
ENSXCOG00000005498	dkc1	100	96.788	ENSXMAG00000004919	dkc1	94	96.788	Xiphophorus_maculatus