EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000005697 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 1902 bases
Position: chrKQ557220.1:30731581-30733482
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000007391	zf-C2H2	PF00096.26	1e-23	1	5
ENSXCOP00000007391	zf-C2H2	PF00096.26	1e-23	2	5
ENSXCOP00000007391	zf-C2H2	PF00096.26	1e-23	3	5
ENSXCOP00000007391	zf-C2H2	PF00096.26	1e-23	4	5
ENSXCOP00000007391	zf-C2H2	PF00096.26	1e-23	5	5
ENSXCOP00000007391	zf-C2H2_jaz	PF12171.8	8.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000007486	-	705	-	ENSXCOP00000007391	234 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000005697's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000005697's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000005697	-	99	48.810	ENSXCOG00000010567	-	89	48.810
ENSXCOG00000005697	-	98	50.617	ENSXCOG00000001292	-	79	50.617
ENSXCOG00000005697	-	99	40.000	ENSXCOG00000015947	-	89	40.000
ENSXCOG00000005697	-	94	41.228	ENSXCOG00000006951	-	90	32.639
ENSXCOG00000005697	-	55	43.590	ENSXCOG00000010950	si:dkey-210j14.3	61	43.590
ENSXCOG00000005697	-	93	38.298	ENSXCOG00000009668	-	74	38.298
ENSXCOG00000005697	-	97	49.315	ENSXCOG00000003451	-	91	49.315
ENSXCOG00000005697	-	69	38.554	ENSXCOG00000013213	-	79	38.554
ENSXCOG00000005697	-	100	42.373	ENSXCOG00000019401	-	93	42.373
ENSXCOG00000005697	-	55	40.426	ENSXCOG00000011372	-	78	40.426
ENSXCOG00000005697	-	95	46.809	ENSXCOG00000009794	-	74	46.809
ENSXCOG00000005697	-	97	52.427	ENSXCOG00000008116	-	88	52.427
ENSXCOG00000005697	-	98	46.809	ENSXCOG00000019484	-	96	46.809
ENSXCOG00000005697	-	97	42.308	ENSXCOG00000019482	-	85	42.308
ENSXCOG00000005697	-	97	32.743	ENSXCOG00000019481	-	78	32.743
ENSXCOG00000005697	-	97	34.197	ENSXCOG00000012458	-	80	34.197
ENSXCOG00000005697	-	99	45.098	ENSXCOG00000015312	-	94	45.098
ENSXCOG00000005697	-	57	42.308	ENSXCOG00000003484	-	63	44.578
ENSXCOG00000005697	-	93	43.038	ENSXCOG00000013306	-	64	43.038
ENSXCOG00000005697	-	97	55.435	ENSXCOG00000019457	-	80	55.435
ENSXCOG00000005697	-	97	37.766	ENSXCOG00000007937	-	85	37.766
ENSXCOG00000005697	-	99	42.478	ENSXCOG00000003896	-	60	42.478
ENSXCOG00000005697	-	98	42.991	ENSXCOG00000009003	-	97	40.698
ENSXCOG00000005697	-	94	49.533	ENSXCOG00000000528	-	94	49.038
ENSXCOG00000005697	-	97	48.352	ENSXCOG00000008062	-	99	48.352
ENSXCOG00000005697	-	93	47.436	ENSXCOG00000017871	zgc:113343	63	47.436
ENSXCOG00000005697	-	94	51.471	ENSXCOG00000007529	-	96	51.471
ENSXCOG00000005697	-	96	31.527	ENSXCOG00000008567	prdm5	61	31.527
ENSXCOG00000005697	-	96	41.441	ENSXCOG00000009768	-	75	41.441
ENSXCOG00000005697	-	96	35.193	ENSXCOG00000007396	-	87	35.193
ENSXCOG00000005697	-	98	33.951	ENSXCOG00000014361	-	69	33.951
ENSXCOG00000005697	-	97	48.780	ENSXCOG00000007406	-	99	45.263
ENSXCOG00000005697	-	98	50.000	ENSXCOG00000007981	-	88	44.538
ENSXCOG00000005697	-	99	41.129	ENSXCOG00000007987	-	81	41.129
ENSXCOG00000005697	-	98	42.500	ENSXCOG00000009665	-	76	41.441
ENSXCOG00000005697	-	99	33.333	ENSXCOG00000003431	-	88	33.333
ENSXCOG00000005697	-	96	30.928	ENSXCOG00000003435	-	84	30.928
ENSXCOG00000005697	-	97	44.231	ENSXCOG00000016860	-	97	37.179
ENSXCOG00000005697	-	98	35.789	ENSXCOG00000013787	-	54	35.789
ENSXCOG00000005697	-	94	33.740	ENSXCOG00000003093	-	99	33.740
ENSXCOG00000005697	-	53	38.889	ENSXCOG00000020769	-	93	38.889
ENSXCOG00000005697	-	83	50.667	ENSXCOG00000010948	-	58	50.667
ENSXCOG00000005697	-	99	45.455	ENSXCOG00000007957	-	93	45.455
ENSXCOG00000005697	-	94	38.710	ENSXCOG00000003468	-	79	40.625
ENSXCOG00000005697	-	98	43.396	ENSXCOG00000007376	-	92	36.782
ENSXCOG00000005697	-	98	50.575	ENSXCOG00000008083	-	90	48.718
ENSXCOG00000005697	-	97	44.737	ENSXCOG00000001226	-	88	39.286
ENSXCOG00000005697	-	97	47.115	ENSXCOG00000010488	-	58	47.115
ENSXCOG00000005697	-	97	51.899	ENSXCOG00000016567	-	71	51.899
ENSXCOG00000005697	-	55	40.816	ENSXCOG00000020768	-	72	40.816
ENSXCOG00000005697	-	97	52.809	ENSXCOG00000019443	-	96	52.809
ENSXCOG00000005697	-	68	41.379	ENSXCOG00000008056	-	65	41.379
ENSXCOG00000005697	-	97	48.214	ENSXCOG00000011725	-	94	41.111
ENSXCOG00000005697	-	97	45.455	ENSXCOG00000001116	-	95	40.506
ENSXCOG00000005697	-	95	42.727	ENSXCOG00000019377	-	93	42.727
ENSXCOG00000005697	-	99	31.373	ENSXCOG00000007499	zbtb41	62	31.776
ENSXCOG00000005697	-	95	41.975	ENSXCOG00000010576	-	70	41.975
ENSXCOG00000005697	-	97	50.000	ENSXCOG00000016117	-	97	50.000
ENSXCOG00000005697	-	95	43.137	ENSXCOG00000013066	-	67	43.137
ENSXCOG00000005697	-	98	53.933	ENSXCOG00000002898	-	84	51.923
ENSXCOG00000005697	-	69	39.286	ENSXCOG00000007413	-	71	39.286
ENSXCOG00000005697	-	97	49.524	ENSXCOG00000007414	-	94	49.524
ENSXCOG00000005697	-	95	41.772	ENSXCOG00000009597	ZNF319	62	41.772
ENSXCOG00000005697	-	94	52.128	ENSXCOG00000001200	-	86	52.128
ENSXCOG00000005697	-	98	52.336	ENSXCOG00000002473	-	88	52.336
ENSXCOG00000005697	-	100	40.449	ENSXCOG00000015441	-	83	40.449
ENSXCOG00000005697	-	97	51.648	ENSXCOG00000008978	-	92	51.648
ENSXCOG00000005697	-	94	38.384	ENSXCOG00000003441	-	58	38.384
ENSXCOG00000005697	-	97	48.718	ENSXCOG00000014363	-	56	48.718
ENSXCOG00000005697	-	98	50.000	ENSXCOG00000017328	-	98	50.000
ENSXCOG00000005697	-	98	46.154	ENSXCOG00000012921	-	96	46.392
ENSXCOG00000005697	-	95	45.614	ENSXCOG00000012924	-	83	45.614
ENSXCOG00000005697	-	98	33.168	ENSXCOG00000009798	-	84	33.168
ENSXCOG00000005697	-	97	32.524	ENSXCOG00000000354	-	70	32.524
ENSXCOG00000005697	-	97	49.038	ENSXCOG00000002857	-	92	49.038
ENSXCOG00000005697	-	94	44.643	ENSXCOG00000019492	-	90	44.643
ENSXCOG00000005697	-	81	35.294	ENSXCOG00000019861	-	54	35.294
ENSXCOG00000005697	-	97	49.296	ENSXCOG00000003538	-	97	37.037
ENSXCOG00000005697	-	99	38.462	ENSXCOG00000003530	-	91	30.374
ENSXCOG00000005697	-	97	45.133	ENSXCOG00000003532	-	77	45.133
ENSXCOG00000005697	-	94	45.098	ENSXCOG00000003537	-	74	45.098
ENSXCOG00000005697	-	99	36.264	ENSXCOG00000007945	-	93	36.264
ENSXCOG00000005697	-	97	44.762	ENSXCOG00000007941	-	85	44.762
ENSXCOG00000005697	-	97	34.545	ENSXCOG00000007139	-	71	41.758
ENSXCOG00000005697	-	97	49.275	ENSXCOG00000003472	-	89	37.500
ENSXCOG00000005697	-	92	37.500	ENSXCOG00000009992	zbtb47b	63	37.500
ENSXCOG00000005697	-	54	47.115	ENSXCOG00000010259	-	55	47.115
ENSXCOG00000005697	-	97	43.089	ENSXCOG00000006614	-	96	43.089
ENSXCOG00000005697	-	95	33.495	ENSXCOG00000013004	-	69	33.495
ENSXCOG00000005697	-	95	31.364	ENSXCOG00000002869	-	64	31.222
ENSXCOG00000005697	-	61	38.824	ENSXCOG00000019675	scrt1b	66	38.824
ENSXCOG00000005697	-	93	39.286	ENSXCOG00000009772	-	87	39.286
ENSXCOG00000005697	-	98	48.413	ENSXCOG00000007994	-	81	47.619
ENSXCOG00000005697	-	97	41.176	ENSXCOG00000002512	-	88	41.176
ENSXCOG00000005697	-	99	33.333	ENSXCOG00000013870	-	74	44.944
ENSXCOG00000005697	-	98	48.810	ENSXCOG00000007368	-	93	48.810
ENSXCOG00000005697	-	100	47.541	ENSXCOG00000016307	-	85	43.137
ENSXCOG00000005697	-	96	31.351	ENSXCOG00000009785	-	76	30.702
ENSXCOG00000005697	-	99	40.000	ENSXCOG00000007076	-	99	40.000
ENSXCOG00000005697	-	99	30.081	ENSXCOG00000019149	znf526	57	46.835
ENSXCOG00000005697	-	96	48.649	ENSXCOG00000018253	-	92	48.649
ENSXCOG00000005697	-	99	34.807	ENSXCOG00000019382	-	88	34.807
ENSXCOG00000005697	-	93	47.525	ENSXCOG00000006553	-	86	47.525
ENSXCOG00000005697	-	95	34.375	ENSXCOG00000003001	-	86	34.375

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000005697	-	82	40.517	ENSACIG00000017166	-	52	40.517	Amphilophus_citrinellus
ENSXCOG00000005697	-	95	35.211	ENSAPEG00000019755	-	84	35.211	Amphiprion_percula
ENSXCOG00000005697	-	83	40.741	ENSCING00000004861	zf(c2h2)-12	64	36.066	Ciona_intestinalis
ENSXCOG00000005697	-	96	32.039	ENSCING00000005713	-	92	32.039	Ciona_intestinalis
ENSXCOG00000005697	-	99	38.202	ENSCSAVG00000009574	-	99	38.202	Ciona_savignyi
ENSXCOG00000005697	-	99	38.750	ENSCSAVG00000005896	-	70	37.383	Ciona_savignyi
ENSXCOG00000005697	-	97	38.462	ENSCSAVG00000006729	-	69	32.710	Ciona_savignyi
ENSXCOG00000005697	-	97	41.860	ENSCSEG00000005491	-	76	32.540	Cynoglossus_semilaevis
ENSXCOG00000005697	-	99	37.895	ENSCVAG00000016098	-	89	37.895	Cyprinodon_variegatus
ENSXCOG00000005697	-	98	49.425	ENSCVAG00000002295	-	83	49.425	Cyprinodon_variegatus
ENSXCOG00000005697	-	93	31.481	FBgn0037722	CG8319	50	31.481	Drosophila_melanogaster
ENSXCOG00000005697	-	97	40.336	ENSEBUG00000015522	-	69	40.336	Eptatretus_burgeri
ENSXCOG00000005697	-	97	40.164	ENSEBUG00000004841	-	81	40.164	Eptatretus_burgeri
ENSXCOG00000005697	-	97	42.308	ENSEBUG00000000735	-	98	42.308	Eptatretus_burgeri
ENSXCOG00000005697	-	100	42.593	ENSEBUG00000008392	-	76	42.593	Eptatretus_burgeri
ENSXCOG00000005697	-	99	32.456	ENSFHEG00000003596	-	74	32.456	Fundulus_heteroclitus
ENSXCOG00000005697	-	95	48.077	ENSFHEG00000013644	-	91	37.600	Fundulus_heteroclitus
ENSXCOG00000005697	-	100	40.625	ENSFHEG00000012990	-	91	40.625	Fundulus_heteroclitus
ENSXCOG00000005697	-	97	38.393	ENSGACG00000018415	-	98	38.393	Gasterosteus_aculeatus
ENSXCOG00000005697	-	100	47.222	ENSHCOG00000017437	-	70	47.917	Hippocampus_comes
ENSXCOG00000005697	-	95	46.269	ENSHCOG00000014887	-	66	46.269	Hippocampus_comes
ENSXCOG00000005697	-	95	38.889	ENSHCOG00000001313	-	58	38.889	Hippocampus_comes
ENSXCOG00000005697	-	95	42.857	ENSHCOG00000014881	-	72	42.857	Hippocampus_comes
ENSXCOG00000005697	-	97	33.161	ENSHCOG00000008181	-	77	35.359	Hippocampus_comes
ENSXCOG00000005697	-	99	43.299	ENSKMAG00000012909	-	83	43.299	Kryptolebias_marmoratus
ENSXCOG00000005697	-	93	30.894	ENSKMAG00000007658	-	78	30.894	Kryptolebias_marmoratus
ENSXCOG00000005697	-	97	32.258	ENSONIG00000009894	-	96	32.258	Oreochromis_niloticus
ENSXCOG00000005697	-	99	46.847	ENSONIG00000007812	-	99	46.847	Oreochromis_niloticus
ENSXCOG00000005697	-	99	39.000	ENSONIG00000016416	-	96	39.000	Oreochromis_niloticus
ENSXCOG00000005697	-	98	40.000	ENSONIG00000003224	-	99	40.000	Oreochromis_niloticus
ENSXCOG00000005697	-	95	37.705	ENSONIG00000003471	-	99	38.136	Oreochromis_niloticus
ENSXCOG00000005697	-	98	37.179	ENSORLG00015018254	-	89	37.179	Oryzias_latipes_hsok
ENSXCOG00000005697	-	95	42.718	ENSOMEG00000017673	-	66	42.718	Oryzias_melastigma
ENSXCOG00000005697	-	99	41.935	ENSPMGG00000000243	-	75	44.681	Periophthalmus_magnuspinnatus
ENSXCOG00000005697	-	95	41.346	ENSPMGG00000000489	-	73	41.346	Periophthalmus_magnuspinnatus
ENSXCOG00000005697	-	95	30.058	ENSPMGG00000000218	-	71	31.034	Periophthalmus_magnuspinnatus
ENSXCOG00000005697	-	99	37.607	ENSPMGG00000000458	-	94	37.607	Periophthalmus_magnuspinnatus
ENSXCOG00000005697	-	100	46.429	ENSPMGG00000010563	-	64	46.429	Periophthalmus_magnuspinnatus
ENSXCOG00000005697	-	99	44.037	ENSPMGG00000022524	-	96	41.509	Periophthalmus_magnuspinnatus
ENSXCOG00000005697	-	97	33.333	ENSPMGG00000012289	-	51	33.333	Periophthalmus_magnuspinnatus
ENSXCOG00000005697	-	97	35.246	ENSPMGG00000019842	-	67	35.246	Periophthalmus_magnuspinnatus
ENSXCOG00000005697	-	100	36.082	ENSPMGG00000010664	-	92	36.082	Periophthalmus_magnuspinnatus
ENSXCOG00000005697	-	99	44.578	ENSPMAG00000007983	-	98	44.578	Petromyzon_marinus
ENSXCOG00000005697	-	98	43.750	ENSPFOG00000002879	-	99	43.750	Poecilia_formosa
ENSXCOG00000005697	-	55	41.772	ENSPLAG00000011254	-	55	41.772	Poecilia_latipinna
ENSXCOG00000005697	-	99	41.414	ENSPLAG00000006174	-	76	33.624	Poecilia_latipinna
ENSXCOG00000005697	-	99	35.294	ENSPMEG00000019229	-	62	35.294	Poecilia_mexicana
ENSXCOG00000005697	-	55	41.772	ENSPMEG00000007503	-	57	41.772	Poecilia_mexicana
ENSXCOG00000005697	-	99	43.810	ENSPREG00000016204	-	67	43.810	Poecilia_reticulata
ENSXCOG00000005697	-	99	31.140	ENSPREG00000007146	-	68	31.140	Poecilia_reticulata
ENSXCOG00000005697	-	96	30.172	ENSSMAG00000001359	-	60	30.172	Scophthalmus_maximus
ENSXCOG00000005697	-	99	50.000	ENSSDUG00000000946	-	95	50.000	Seriola_dumerili
ENSXCOG00000005697	-	95	37.168	ENSSLDG00000000464	-	53	37.168	Seriola_lalandi_dorsalis
ENSXCOG00000005697	-	93	35.659	ENSXMAG00000022242	-	70	35.659	Xiphophorus_maculatus