EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000005719 (Gene tree)
Gene ID: -
Gene Symbol: fscn1b
Alias: si:ch211-160d14.1
Full Name: fascin actin-bundling protein 1b
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 8315 bases
Position: chrKQ557220.1:30858872-30867186
Accession: ZDB-GENE-120507-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000007413	FRG1	PF06229.12	2.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000007509	-	1476	-	ENSXCOP00000007413	491 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000005719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000005719's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000005719	fscn1b	98	54.037	ENSACIG00000002025	fscn2b	98	54.037	Amphilophus_citrinellus
ENSXCOG00000005719	fscn1b	98	53.623	ENSATEG00000013607	fscn2b	98	53.623	Anabas_testudineus
ENSXCOG00000005719	fscn1b	58	90.783	ENSATEG00000005335	fscn1b	100	90.783	Anabas_testudineus
ENSXCOG00000005719	fscn1b	98	56.289	ENSACAG00000015216	FSCN2	98	56.289	Anolis_carolinensis
ENSXCOG00000005719	fscn1b	98	53.209	ENSACLG00000014453	fscn2b	98	53.209	Astatotilapia_calliptera
ENSXCOG00000005719	fscn1b	100	73.347	ENSCSEG00000019160	fscn1a	100	73.347	Cynoglossus_semilaevis
ENSXCOG00000005719	fscn1b	91	51.902	ENSCVAG00000018645	fscn2b	99	51.902	Cyprinodon_variegatus
ENSXCOG00000005719	fscn1b	98	45.238	ENSEBUG00000014215	FSCN2	98	45.238	Eptatretus_burgeri
ENSXCOG00000005719	fscn1b	98	72.541	ENSELUG00000011363	fscn1a	99	72.541	Esox_lucius
ENSXCOG00000005719	fscn1b	98	57.618	ENSFALG00000012651	FSCN2	98	48.660	Ficedula_albicollis
ENSXCOG00000005719	fscn1b	98	55.372	ENSGALG00000023354	FSCN2	98	55.372	Gallus_gallus
ENSXCOG00000005719	fscn1b	100	98.371	ENSGAFG00000013512	fscn1b	100	98.371	Gambusia_affinis
ENSXCOG00000005719	fscn1b	98	53.209	ENSHBUG00000021952	fscn2b	98	53.209	Haplochromis_burtoni
ENSXCOG00000005719	fscn1b	98	53.830	ENSHCOG00000015421	fscn2a	98	53.830	Hippocampus_comes
ENSXCOG00000005719	fscn1b	98	69.772	ENSLACG00000016447	FSCN1	98	69.772	Latimeria_chalumnae
ENSXCOG00000005719	fscn1b	100	70.588	ENSLOCG00000004693	fscn1a	98	70.588	Lepisosteus_oculatus
ENSXCOG00000005719	fscn1b	98	53.209	ENSMZEG00005009107	fscn2b	98	53.209	Maylandia_zebra
ENSXCOG00000005719	fscn1b	98	53.209	ENSNBRG00000021249	fscn2b	98	53.209	Neolamprologus_brichardi
ENSXCOG00000005719	fscn1b	98	53.830	ENSONIG00000019860	fscn2b	98	53.830	Oreochromis_niloticus
ENSXCOG00000005719	fscn1b	100	87.805	ENSORLG00000009620	fscn1b	100	87.805	Oryzias_latipes
ENSXCOG00000005719	fscn1b	100	88.008	ENSORLG00020010658	fscn1b	100	88.008	Oryzias_latipes_hni
ENSXCOG00000005719	fscn1b	100	87.602	ENSORLG00015010020	fscn1b	100	87.602	Oryzias_latipes_hsok
ENSXCOG00000005719	fscn1b	98	54.037	ENSOMEG00000008432	fscn2a	98	54.037	Oryzias_melastigma
ENSXCOG00000005719	fscn1b	100	89.024	ENSOMEG00000019920	fscn1b	100	89.024	Oryzias_melastigma
ENSXCOG00000005719	fscn1b	98	54.451	ENSPKIG00000013426	fscn2b	98	54.451	Paramormyrops_kingsleyae
ENSXCOG00000005719	fscn1b	100	67.140	ENSPKIG00000010464	fscn1a	100	67.140	Paramormyrops_kingsleyae
ENSXCOG00000005719	fscn1b	100	98.574	ENSPFOG00000011521	fscn1b	100	98.574	Poecilia_formosa
ENSXCOG00000005719	fscn1b	100	97.760	ENSPLAG00000006140	fscn1b	100	97.760	Poecilia_latipinna
ENSXCOG00000005719	fscn1b	100	98.371	ENSPMEG00000019975	fscn1b	100	98.371	Poecilia_mexicana
ENSXCOG00000005719	fscn1b	98	53.209	ENSPNYG00000019474	fscn2b	98	53.209	Pundamilia_nyererei
ENSXCOG00000005719	fscn1b	100	60.808	ENSPNAG00000014780	fscn1b	100	60.808	Pygocentrus_nattereri
ENSXCOG00000005719	fscn1b	100	55.781	ENSSPUG00000014373	FSCN2	100	55.781	Sphenodon_punctatus
ENSXCOG00000005719	fscn1b	98	69.772	ENSSPUG00000002887	FSCN1	98	69.772	Sphenodon_punctatus
ENSXCOG00000005719	fscn1b	59	58.966	ENSTGUG00000014701	FSCN2	95	58.966	Taeniopygia_guttata
ENSXCOG00000005719	fscn1b	100	69.138	ENSTRUG00000005218	fscn1a	100	69.138	Takifugu_rubripes
ENSXCOG00000005719	fscn1b	98	52.588	ENSTRUG00000011674	fscn2a	98	52.588	Takifugu_rubripes
ENSXCOG00000005719	fscn1b	100	52.130	ENSTNIG00000009778	fscn2a	99	52.130	Tetraodon_nigroviridis
ENSXCOG00000005719	fscn1b	100	99.796	ENSXMAG00000012851	fscn1b	100	99.796	Xiphophorus_maculatus