EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000005748 (Gene tree)
Gene ID: -
Gene Symbol: zgc:113305
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 666 bases
Position: chrKQ557206.1:3696489-3697154
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000007456	MTS	PF05175.14	2.1e-05	1	1
ENSXCOP00000007456	Methyltransf_31	PF13847.6	1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000007552	-	666	-	ENSXCOP00000007456	221 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000005748's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000005748's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000005748	zgc:113305	97	39.450	ENSG00000214756	CSKMT	85	39.535	Homo_sapiens
ENSXCOG00000005748	zgc:113305	100	73.303	ENSAPOG00000004295	zgc:113305	87	73.303	Acanthochromis_polyacanthus
ENSXCOG00000005748	zgc:113305	97	38.073	ENSAMEG00000006516	CSKMT	88	37.104	Ailuropoda_melanoleuca
ENSXCOG00000005748	zgc:113305	98	70.833	ENSACIG00000020925	zgc:113305	99	70.833	Amphilophus_citrinellus
ENSXCOG00000005748	zgc:113305	100	74.208	ENSAOCG00000007338	zgc:113305	87	74.208	Amphiprion_ocellaris
ENSXCOG00000005748	zgc:113305	100	74.208	ENSAPEG00000016534	zgc:113305	87	74.208	Amphiprion_percula
ENSXCOG00000005748	zgc:113305	97	74.299	ENSATEG00000019700	zgc:113305	86	74.299	Anabas_testudineus
ENSXCOG00000005748	zgc:113305	98	38.009	ENSANAG00000028032	CSKMT	88	38.009	Aotus_nancymaae
ENSXCOG00000005748	zgc:113305	98	69.907	ENSACLG00000011174	zgc:113305	99	69.907	Astatotilapia_calliptera
ENSXCOG00000005748	zgc:113305	95	38.785	ENSBTAG00000022293	CSKMT	85	38.785	Bos_taurus
ENSXCOG00000005748	zgc:113305	97	39.908	ENSCJAG00000018816	CSKMT	87	40.367	Callithrix_jacchus
ENSXCOG00000005748	zgc:113305	95	38.785	ENSCAFG00000029552	CSKMT	55	38.318	Canis_familiaris
ENSXCOG00000005748	zgc:113305	95	38.785	ENSCAFG00020013099	CSKMT	85	38.318	Canis_lupus_dingo
ENSXCOG00000005748	zgc:113305	95	38.318	ENSCHIG00000011409	CSKMT	85	38.318	Capra_hircus
ENSXCOG00000005748	zgc:113305	97	38.532	ENSTSYG00000008533	CSKMT	88	38.009	Carlito_syrichta
ENSXCOG00000005748	zgc:113305	95	40.741	ENSCPOG00000027504	CSKMT	86	40.741	Cavia_porcellus
ENSXCOG00000005748	zgc:113305	95	39.720	ENSCCAG00000037825	-	85	38.710	Cebus_capucinus
ENSXCOG00000005748	zgc:113305	95	39.720	ENSCCAG00000028173	-	85	38.710	Cebus_capucinus
ENSXCOG00000005748	zgc:113305	97	38.991	ENSCATG00000035188	CSKMT	87	38.991	Cercocebus_atys
ENSXCOG00000005748	zgc:113305	95	38.318	ENSCLAG00000000298	CSKMT	84	38.389	Chinchilla_lanigera
ENSXCOG00000005748	zgc:113305	97	38.991	ENSCSAG00000006647	CSKMT	87	38.991	Chlorocebus_sabaeus
ENSXCOG00000005748	zgc:113305	95	37.674	ENSCHOG00000002925	CSKMT	85	37.674	Choloepus_hoffmanni
ENSXCOG00000005748	zgc:113305	96	41.475	ENSCPBG00000017939	CSKMT	86	41.014	Chrysemys_picta_bellii
ENSXCOG00000005748	zgc:113305	97	38.991	ENSCANG00000043308	CSKMT	87	38.991	Colobus_angolensis_palliatus
ENSXCOG00000005748	zgc:113305	97	67.442	ENSCSEG00000013910	zgc:113305	85	66.977	Cynoglossus_semilaevis
ENSXCOG00000005748	zgc:113305	100	80.995	ENSCVAG00000008527	zgc:113305	100	80.995	Cyprinodon_variegatus
ENSXCOG00000005748	zgc:113305	97	64.651	ENSDARG00000054856	CSKMT	84	63.721	Danio_rerio
ENSXCOG00000005748	zgc:113305	97	38.073	ENSDNOG00000036002	CSKMT	85	38.140	Dasypus_novemcinctus
ENSXCOG00000005748	zgc:113305	96	37.500	ENSEASG00005011179	CSKMT	86	36.986	Equus_asinus_asinus
ENSXCOG00000005748	zgc:113305	96	37.500	ENSECAG00000017322	CSKMT	86	36.986	Equus_caballus
ENSXCOG00000005748	zgc:113305	87	68.229	ENSELUG00000013394	zgc:113305	86	68.229	Esox_lucius
ENSXCOG00000005748	zgc:113305	98	38.462	ENSFCAG00000019062	CSKMT	88	38.462	Felis_catus
ENSXCOG00000005748	zgc:113305	99	80.000	ENSFHEG00000022529	zgc:113305	87	80.000	Fundulus_heteroclitus
ENSXCOG00000005748	zgc:113305	97	66.047	ENSGMOG00000020225	zgc:113305	99	66.047	Gadus_morhua
ENSXCOG00000005748	zgc:113305	100	96.380	ENSGAFG00000003065	zgc:113305	87	96.380	Gambusia_affinis
ENSXCOG00000005748	zgc:113305	97	68.519	ENSGACG00000020022	zgc:113305	98	68.519	Gasterosteus_aculeatus
ENSXCOG00000005748	zgc:113305	96	41.014	ENSGAGG00000016783	CSKMT	82	40.553	Gopherus_agassizii
ENSXCOG00000005748	zgc:113305	97	38.532	ENSGGOG00000027342	CSKMT	85	39.070	Gorilla_gorilla
ENSXCOG00000005748	zgc:113305	96	69.811	ENSHBUG00000009964	zgc:113305	84	69.811	Haplochromis_burtoni
ENSXCOG00000005748	zgc:113305	97	68.692	ENSHCOG00000019343	zgc:113305	96	68.224	Hippocampus_comes
ENSXCOG00000005748	zgc:113305	97	69.159	ENSHCOG00000003322	-	82	68.692	Hippocampus_comes
ENSXCOG00000005748	zgc:113305	99	78.182	ENSKMAG00000004256	zgc:113305	84	78.182	Kryptolebias_marmoratus
ENSXCOG00000005748	zgc:113305	97	70.698	ENSLBEG00000001556	zgc:113305	97	69.767	Labrus_bergylta
ENSXCOG00000005748	zgc:113305	97	49.065	ENSLACG00000017239	CSKMT	81	49.065	Latimeria_chalumnae
ENSXCOG00000005748	zgc:113305	97	38.991	ENSMFAG00000032323	CSKMT	87	38.991	Macaca_fascicularis
ENSXCOG00000005748	zgc:113305	97	38.991	ENSMMUG00000046328	CSKMT	87	38.991	Macaca_mulatta
ENSXCOG00000005748	zgc:113305	97	38.991	ENSMNEG00000032750	CSKMT	87	38.991	Macaca_nemestrina
ENSXCOG00000005748	zgc:113305	97	38.532	ENSMLEG00000029829	CSKMT	87	38.532	Mandrillus_leucophaeus
ENSXCOG00000005748	zgc:113305	97	70.561	ENSMAMG00000004277	zgc:113305	97	70.561	Mastacembelus_armatus
ENSXCOG00000005748	zgc:113305	98	69.907	ENSMZEG00005008208	zgc:113305	86	69.907	Maylandia_zebra
ENSXCOG00000005748	zgc:113305	98	38.914	ENSMICG00000038782	CSKMT	85	40.000	Microcebus_murinus
ENSXCOG00000005748	zgc:113305	97	70.561	ENSMMOG00000012286	zgc:113305	97	70.561	Mola_mola
ENSXCOG00000005748	zgc:113305	95	38.140	ENSMPUG00000013738	CSKMT	85	37.674	Mustela_putorius_furo
ENSXCOG00000005748	zgc:113305	95	39.815	ENSMLUG00000023559	CSKMT	85	39.815	Myotis_lucifugus
ENSXCOG00000005748	zgc:113305	97	38.073	ENSNGAG00000013023	-	86	38.073	Nannospalax_galili
ENSXCOG00000005748	zgc:113305	98	68.981	ENSNBRG00000012057	zgc:113305	86	68.981	Neolamprologus_brichardi
ENSXCOG00000005748	zgc:113305	98	37.557	ENSNLEG00000004038	CSKMT	88	37.557	Nomascus_leucogenys
ENSXCOG00000005748	zgc:113305	95	41.981	ENSOPRG00000018764	CSKMT	85	41.981	Ochotona_princeps
ENSXCOG00000005748	zgc:113305	98	68.981	ENSONIG00000018334	zgc:113305	86	68.981	Oreochromis_niloticus
ENSXCOG00000005748	zgc:113305	98	39.367	ENSOCUG00000024025	CSKMT	88	39.367	Oryctolagus_cuniculus
ENSXCOG00000005748	zgc:113305	97	71.028	ENSORLG00000011219	zgc:113305	84	70.093	Oryzias_latipes
ENSXCOG00000005748	zgc:113305	97	71.495	ENSORLG00020000328	zgc:113305	84	70.561	Oryzias_latipes_hni
ENSXCOG00000005748	zgc:113305	97	71.028	ENSORLG00015014178	zgc:113305	84	70.093	Oryzias_latipes_hsok
ENSXCOG00000005748	zgc:113305	98	69.907	ENSOMEG00000006408	zgc:113305	85	69.907	Oryzias_melastigma
ENSXCOG00000005748	zgc:113305	96	39.545	ENSOGAG00000024258	CSKMT	87	39.545	Otolemur_garnettii
ENSXCOG00000005748	zgc:113305	95	38.318	ENSOARG00000016344	CSKMT	85	38.318	Ovis_aries
ENSXCOG00000005748	zgc:113305	97	38.532	ENSPPAG00000029192	CSKMT	85	39.070	Pan_paniscus
ENSXCOG00000005748	zgc:113305	98	38.462	ENSPPRG00000012199	CSKMT	97	38.462	Panthera_pardus
ENSXCOG00000005748	zgc:113305	98	38.462	ENSPTIG00000013521	CSKMT	88	38.462	Panthera_tigris_altaica
ENSXCOG00000005748	zgc:113305	97	38.532	ENSPTRG00000034411	CSKMT	85	39.070	Pan_troglodytes
ENSXCOG00000005748	zgc:113305	97	38.991	ENSPANG00000013481	CSKMT	87	38.991	Papio_anubis
ENSXCOG00000005748	zgc:113305	97	40.826	ENSPSIG00000014942	CSKMT	84	40.826	Pelodiscus_sinensis
ENSXCOG00000005748	zgc:113305	97	63.134	ENSPMGG00000012039	zgc:113305	98	63.134	Periophthalmus_magnuspinnatus
ENSXCOG00000005748	zgc:113305	95	44.907	ENSPMAG00000006721	zgc:113305	82	44.907	Petromyzon_marinus
ENSXCOG00000005748	zgc:113305	97	39.189	ENSPCIG00000015383	CSKMT	86	38.739	Phascolarctos_cinereus
ENSXCOG00000005748	zgc:113305	100	95.928	ENSPFOG00000020763	zgc:113305	86	95.928	Poecilia_formosa
ENSXCOG00000005748	zgc:113305	100	95.023	ENSPLAG00000004614	zgc:113305	87	95.023	Poecilia_latipinna
ENSXCOG00000005748	zgc:113305	100	95.023	ENSPMEG00000003923	zgc:113305	87	95.023	Poecilia_mexicana
ENSXCOG00000005748	zgc:113305	100	94.570	ENSPREG00000000773	zgc:113305	100	94.570	Poecilia_reticulata
ENSXCOG00000005748	zgc:113305	97	38.073	ENSPPYG00000003156	CSKMT	87	38.073	Pongo_abelii
ENSXCOG00000005748	zgc:113305	95	40.465	ENSPCAG00000015776	CSKMT	86	40.465	Procavia_capensis
ENSXCOG00000005748	zgc:113305	98	39.367	ENSPCOG00000016342	CSKMT	88	39.367	Propithecus_coquereli
ENSXCOG00000005748	zgc:113305	97	38.991	ENSPVAG00000003467	CSKMT	87	38.991	Pteropus_vampyrus
ENSXCOG00000005748	zgc:113305	98	68.981	ENSPNYG00000019154	zgc:113305	86	68.981	Pundamilia_nyererei
ENSXCOG00000005748	zgc:113305	97	64.486	ENSPNAG00000003600	zgc:113305	84	64.019	Pygocentrus_nattereri
ENSXCOG00000005748	zgc:113305	97	38.532	ENSRBIG00000037785	CSKMT	87	38.073	Rhinopithecus_bieti
ENSXCOG00000005748	zgc:113305	97	38.532	ENSRROG00000027675	CSKMT	87	38.073	Rhinopithecus_roxellana
ENSXCOG00000005748	zgc:113305	97	40.367	ENSSBOG00000030424	CSKMT	88	39.367	Saimiri_boliviensis_boliviensis
ENSXCOG00000005748	zgc:113305	97	57.944	ENSSFOG00015021937	mettl12	81	57.944	Scleropages_formosus
ENSXCOG00000005748	zgc:113305	97	72.811	ENSSMAG00000013931	zgc:113305	84	72.811	Scophthalmus_maximus
ENSXCOG00000005748	zgc:113305	97	76.168	ENSSDUG00000018128	zgc:113305	84	76.168	Seriola_dumerili
ENSXCOG00000005748	zgc:113305	97	76.168	ENSSLDG00000016745	zgc:113305	97	76.168	Seriola_lalandi_dorsalis
ENSXCOG00000005748	zgc:113305	96	42.723	ENSSPUG00000008416	CSKMT	83	42.723	Sphenodon_punctatus
ENSXCOG00000005748	zgc:113305	100	73.303	ENSSPAG00000007589	zgc:113305	87	73.303	Stegastes_partitus
ENSXCOG00000005748	zgc:113305	95	38.318	ENSSSCG00000027847	CSKMT	84	38.863	Sus_scrofa
ENSXCOG00000005748	zgc:113305	97	66.977	ENSTNIG00000001012	zgc:113305	98	66.977	Tetraodon_nigroviridis
ENSXCOG00000005748	zgc:113305	94	37.441	ENSTTRG00000002469	METTL12	84	37.441	Tursiops_truncatus
ENSXCOG00000005748	zgc:113305	97	38.532	ENSUAMG00000025977	CSKMT	88	37.557	Ursus_americanus
ENSXCOG00000005748	zgc:113305	97	38.532	ENSUMAG00000014401	CSKMT	88	37.557	Ursus_maritimus
ENSXCOG00000005748	zgc:113305	95	39.070	ENSVVUG00000029858	CSKMT	85	38.605	Vulpes_vulpes
ENSXCOG00000005748	zgc:113305	100	99.095	ENSXMAG00000020830	zgc:113305	87	99.095	Xiphophorus_maculatus