EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000005887 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171480
Alias: -
Full Name: zgc:171480
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 6839 bases
Position: chrKQ557224.1:2137739-2144577
Accession: ZDB-GENE-080204-83
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000007651	Mitoc_L55	PF09776.9	6.1e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000007747	-	369	-	ENSXCOP00000007651	122 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000005887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000005887's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000005887	zgc:171480	76	72.043	ENSAPOG00000002881	zgc:171480	65	72.043	Acanthochromis_polyacanthus
ENSXCOG00000005887	zgc:171480	76	75.269	ENSACIG00000001646	zgc:171480	68	75.269	Amphilophus_citrinellus
ENSXCOG00000005887	zgc:171480	94	64.754	ENSAOCG00000016155	zgc:171480	85	64.754	Amphiprion_ocellaris
ENSXCOG00000005887	zgc:171480	94	64.754	ENSAPEG00000022327	zgc:171480	85	64.754	Amphiprion_percula
ENSXCOG00000005887	zgc:171480	91	64.865	ENSATEG00000005625	zgc:171480	73	64.865	Anabas_testudineus
ENSXCOG00000005887	zgc:171480	91	53.509	ENSACAG00000006897	-	90	52.632	Anolis_carolinensis
ENSXCOG00000005887	zgc:171480	76	74.194	ENSACLG00000005172	zgc:171480	67	74.194	Astatotilapia_calliptera
ENSXCOG00000005887	zgc:171480	75	64.835	ENSAMXG00000043839	zgc:171480	69	64.835	Astyanax_mexicanus
ENSXCOG00000005887	zgc:171480	75	55.435	ENSCPBG00000001771	-	73	55.435	Chrysemys_picta_bellii
ENSXCOG00000005887	zgc:171480	76	56.989	ENSCSEG00000019533	zgc:171480	67	56.989	Cynoglossus_semilaevis
ENSXCOG00000005887	zgc:171480	83	62.745	ENSDARG00000043402	zgc:171480	85	56.557	Danio_rerio
ENSXCOG00000005887	zgc:171480	80	55.140	ENSELUG00000007716	zgc:171480	81	55.140	Esox_lucius
ENSXCOG00000005887	zgc:171480	79	46.875	ENSFALG00000001083	-	99	46.875	Ficedula_albicollis
ENSXCOG00000005887	zgc:171480	83	84.466	ENSFHEG00000000203	zgc:171480	74	84.466	Fundulus_heteroclitus
ENSXCOG00000005887	zgc:171480	80	67.347	ENSGMOG00000019009	zgc:171480	96	67.347	Gadus_morhua
ENSXCOG00000005887	zgc:171480	75	46.154	ENSGALG00000038820	-	80	47.253	Gallus_gallus
ENSXCOG00000005887	zgc:171480	95	83.193	ENSGAFG00000004832	-	83	83.193	Gambusia_affinis
ENSXCOG00000005887	zgc:171480	75	78.261	ENSGACG00000002136	zgc:171480	100	78.261	Gasterosteus_aculeatus
ENSXCOG00000005887	zgc:171480	75	53.261	ENSGAGG00000001806	-	74	53.261	Gopherus_agassizii
ENSXCOG00000005887	zgc:171480	76	74.194	ENSHBUG00000007895	zgc:171480	67	74.194	Haplochromis_burtoni
ENSXCOG00000005887	zgc:171480	93	62.500	ENSHCOG00000003526	zgc:171480	66	62.500	Hippocampus_comes
ENSXCOG00000005887	zgc:171480	75	58.696	ENSIPUG00000001273	mrpl55	70	58.696	Ictalurus_punctatus
ENSXCOG00000005887	zgc:171480	92	63.393	ENSKMAG00000002011	zgc:171480	88	63.393	Kryptolebias_marmoratus
ENSXCOG00000005887	zgc:171480	94	65.289	ENSLBEG00000016107	-	96	65.289	Labrus_bergylta
ENSXCOG00000005887	zgc:171480	94	65.289	ENSLBEG00000010915	zgc:171480	96	65.289	Labrus_bergylta
ENSXCOG00000005887	zgc:171480	75	61.290	ENSLACG00000016281	zgc:171480	70	61.290	Latimeria_chalumnae
ENSXCOG00000005887	zgc:171480	90	62.500	ENSMAMG00000022250	zgc:171480	76	62.500	Mastacembelus_armatus
ENSXCOG00000005887	zgc:171480	76	74.194	ENSMZEG00005015585	zgc:171480	67	74.194	Maylandia_zebra
ENSXCOG00000005887	zgc:171480	75	47.253	ENSMGAG00000002612	-	80	47.253	Meleagris_gallopavo
ENSXCOG00000005887	zgc:171480	95	43.103	ENSMMOG00000008740	-	87	43.103	Mola_mola
ENSXCOG00000005887	zgc:171480	86	60.377	ENSMALG00000019823	zgc:171480	84	60.377	Monopterus_albus
ENSXCOG00000005887	zgc:171480	76	74.194	ENSNBRG00000019447	zgc:171480	67	74.194	Neolamprologus_brichardi
ENSXCOG00000005887	zgc:171480	76	73.118	ENSONIG00000007645	zgc:171480	69	73.118	Oreochromis_niloticus
ENSXCOG00000005887	zgc:171480	79	66.667	ENSORLG00020006963	zgc:171480	72	66.667	Oryzias_latipes_hni
ENSXCOG00000005887	zgc:171480	79	67.708	ENSORLG00015003266	zgc:171480	72	67.708	Oryzias_latipes_hsok
ENSXCOG00000005887	zgc:171480	79	68.750	ENSOMEG00000008184	zgc:171480	70	68.750	Oryzias_melastigma
ENSXCOG00000005887	zgc:171480	79	59.794	ENSPKIG00000006753	zgc:171480	75	59.794	Paramormyrops_kingsleyae
ENSXCOG00000005887	zgc:171480	75	54.945	ENSPSIG00000010893	-	73	54.945	Pelodiscus_sinensis
ENSXCOG00000005887	zgc:171480	76	62.766	ENSPMGG00000012657	-	73	62.766	Periophthalmus_magnuspinnatus
ENSXCOG00000005887	zgc:171480	76	47.368	ENSPMAG00000000867	zgc:171480	85	46.465	Petromyzon_marinus
ENSXCOG00000005887	zgc:171480	79	46.392	ENSPCIG00000021848	-	77	46.392	Phascolarctos_cinereus
ENSXCOG00000005887	zgc:171480	95	79.832	ENSPFOG00000012703	zgc:171480	85	79.832	Poecilia_formosa
ENSXCOG00000005887	zgc:171480	95	80.672	ENSPREG00000020328	zgc:171480	85	80.672	Poecilia_reticulata
ENSXCOG00000005887	zgc:171480	75	63.043	ENSPNAG00000017309	zgc:171480	70	63.043	Pygocentrus_nattereri
ENSXCOG00000005887	zgc:171480	84	60.194	ENSSFOG00015015668	mrpl55	79	60.194	Scleropages_formosus
ENSXCOG00000005887	zgc:171480	83	66.990	ENSSMAG00000005429	zgc:171480	74	66.990	Scophthalmus_maximus
ENSXCOG00000005887	zgc:171480	76	68.817	ENSSDUG00000022556	zgc:171480	63	68.817	Seriola_dumerili
ENSXCOG00000005887	zgc:171480	76	67.742	ENSSLDG00000019598	zgc:171480	63	67.742	Seriola_lalandi_dorsalis
ENSXCOG00000005887	zgc:171480	85	48.077	ENSSPUG00000000735	-	83	48.077	Sphenodon_punctatus
ENSXCOG00000005887	zgc:171480	94	68.908	ENSSPAG00000011598	zgc:171480	84	68.908	Stegastes_partitus
ENSXCOG00000005887	zgc:171480	76	69.892	ENSTRUG00000003082	zgc:171480	65	69.892	Takifugu_rubripes
ENSXCOG00000005887	zgc:171480	95	85.714	ENSXMAG00000007937	zgc:171480	85	85.714	Xiphophorus_maculatus