EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000005917 (Gene tree)
Gene ID: -
Gene Symbol: srsf2a
Alias: PR264|SC-35|SC35|SFRS2|SFRS2A
Full Name: serine/arginine-rich splicing factor 2a
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 1104 bases
Position: chrKQ557202.1:15748500-15749603
Accession: ZDB-GENE-040426-2706
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000007695	RRM_1	PF00076.22	6.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000007792	-	657	-	ENSXCOP00000007695	218 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000005917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000005917's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000005917	srsf2a	50	31.532	ENSXCOG00000018826	srsf4	72	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000005917	srsf2a	52	83.621	ENSAPOG00000008073	srsf2b	53	86.207	Acanthochromis_polyacanthus
ENSXCOG00000005917	srsf2a	50	99.083	ENSAPOG00000024396	srsf2a	50	99.123	Acanthochromis_polyacanthus
ENSXCOG00000005917	srsf2a	52	100.000	ENSAOCG00000021878	srsf2a	52	100.000	Amphiprion_ocellaris
ENSXCOG00000005917	srsf2a	52	100.000	ENSAPEG00000023494	srsf2a	52	100.000	Amphiprion_percula
ENSXCOG00000005917	srsf2a	52	93.103	ENSACAG00000008553	-	52	93.103	Anolis_carolinensis
ENSXCOG00000005917	srsf2a	52	98.246	ENSACLG00000027016	srsf2a	50	98.246	Astatotilapia_calliptera
ENSXCOG00000005917	srsf2a	99	61.751	ENSCHOG00000014019	-	53	91.667	Choloepus_hoffmanni
ENSXCOG00000005917	srsf2a	51	99.107	ENSCSEG00000013387	srsf2a	52	99.107	Cynoglossus_semilaevis
ENSXCOG00000005917	srsf2a	54	97.458	ENSDARG00000057484	srsf2a	100	97.458	Danio_rerio
ENSXCOG00000005917	srsf2a	92	47.264	ENSDNOG00000033905	-	53	63.000	Dasypus_novemcinctus
ENSXCOG00000005917	srsf2a	54	88.136	ENSFALG00000000869	-	50	91.743	Ficedula_albicollis
ENSXCOG00000005917	srsf2a	50	100.000	ENSFHEG00000010835	srsf2a	100	78.390	Fundulus_heteroclitus
ENSXCOG00000005917	srsf2a	52	93.103	ENSGALG00000017357	SRSF2	52	93.103	Gallus_gallus
ENSXCOG00000005917	srsf2a	100	79.358	ENSGAFG00000005791	srsf2a	100	83.945	Gambusia_affinis
ENSXCOG00000005917	srsf2a	52	98.246	ENSHBUG00000013254	srsf2a	50	98.246	Haplochromis_burtoni
ENSXCOG00000005917	srsf2a	51	96.396	ENSIPUG00000004066	SRSF2	52	96.491	Ictalurus_punctatus
ENSXCOG00000005917	srsf2a	60	73.846	ENSSTOG00000025265	-	52	96.809	Ictidomys_tridecemlineatus
ENSXCOG00000005917	srsf2a	51	99.107	ENSKMAG00000009464	srsf2a	57	91.603	Kryptolebias_marmoratus
ENSXCOG00000005917	srsf2a	51	99.107	ENSLBEG00000027265	srsf2a	52	99.107	Labrus_bergylta
ENSXCOG00000005917	srsf2a	52	93.860	ENSLOCG00000011252	srsf2a	53	93.860	Lepisosteus_oculatus
ENSXCOG00000005917	srsf2a	50	100.000	ENSMAMG00000002803	srsf2a	50	100.000	Mastacembelus_armatus
ENSXCOG00000005917	srsf2a	52	98.246	ENSMZEG00005004205	srsf2a	50	98.246	Maylandia_zebra
ENSXCOG00000005917	srsf2a	51	86.607	ENSMZEG00005001748	-	50	86.607	Maylandia_zebra
ENSXCOG00000005917	srsf2a	52	99.123	ENSMMOG00000020751	srsf2a	53	99.123	Mola_mola
ENSXCOG00000005917	srsf2a	52	100.000	ENSMALG00000012956	srsf2a	50	100.000	Monopterus_albus
ENSXCOG00000005917	srsf2a	89	44.845	ENSMLUG00000026613	-	52	59.813	Myotis_lucifugus
ENSXCOG00000005917	srsf2a	57	72.441	ENSOCUG00000021840	-	51	74.336	Oryctolagus_cuniculus
ENSXCOG00000005917	srsf2a	52	97.368	ENSOMEG00000007583	srsf2a	56	94.697	Oryzias_melastigma
ENSXCOG00000005917	srsf2a	52	92.982	ENSPKIG00000023128	-	50	92.982	Paramormyrops_kingsleyae
ENSXCOG00000005917	srsf2a	89	68.528	ENSPMGG00000010911	srsf2a	56	92.308	Periophthalmus_magnuspinnatus
ENSXCOG00000005917	srsf2a	52	100.000	ENSPREG00000003658	srsf2a	100	79.661	Poecilia_reticulata
ENSXCOG00000005917	srsf2a	52	98.246	ENSPNYG00000001148	srsf2a	50	98.246	Pundamilia_nyererei
ENSXCOG00000005917	srsf2a	51	95.495	ENSPNAG00000010477	srsf2a	52	95.614	Pygocentrus_nattereri
ENSXCOG00000005917	srsf2a	72	58.659	ENSRROG00000026503	SRSF8	58	56.627	Rhinopithecus_roxellana
ENSXCOG00000005917	srsf2a	59	90.698	ENSSFOG00015003975	-	50	96.460	Scleropages_formosus
ENSXCOG00000005917	srsf2a	55	95.833	ENSSMAG00000005854	srsf2a	53	99.107	Scophthalmus_maximus
ENSXCOG00000005917	srsf2a	55	96.667	ENSSDUG00000013865	srsf2a	50	100.000	Seriola_dumerili
ENSXCOG00000005917	srsf2a	55	96.667	ENSSLDG00000017717	srsf2a	50	100.000	Seriola_lalandi_dorsalis
ENSXCOG00000005917	srsf2a	64	66.429	ENSSSCG00000012212	-	56	70.909	Sus_scrofa
ENSXCOG00000005917	srsf2a	52	92.241	ENSTGUG00000007799	-	52	92.241	Taeniopygia_guttata
ENSXCOG00000005917	srsf2a	55	86.066	ENSTRUG00000024363	srsf2b	50	88.596	Takifugu_rubripes
ENSXCOG00000005917	srsf2a	52	99.123	ENSTRUG00000018104	srsf2a	50	99.123	Takifugu_rubripes
ENSXCOG00000005917	srsf2a	52	99.123	ENSTNIG00000001280	srsf2a	51	99.123	Tetraodon_nigroviridis
ENSXCOG00000005917	srsf2a	52	93.860	ENSXETG00000025271	srsf2	52	93.860	Xenopus_tropicalis