EuRBPDB

Description

Ensembl ID: ENSXCOG00000005936 (Gene tree)
Gene ID: -
Gene Symbol: cherp
Alias: fc83d01|ik:tdsubc_2h12|tdsubc_2h12|wu:fc83d01|xx:tdsubc_2h12|zgc:55518
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 9477 bases
Position: chrKQ557224.1:2388987-2398463
Accession: ZDB-GENE-040407-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000007721	Surp	PF01805.20	1.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000007818	-	1146	-	ENSXCOP00000007721	381 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000005936	cherp	78	86.532	ENSAPOG00000019215	cherp	97	86.532	Acanthochromis_polyacanthus
ENSXCOG00000005936	cherp	87	80.422	ENSDARG00000021812	cherp	100	79.699	Danio_rerio
ENSXCOG00000005936	cherp	79	64.062	FBgn0261872	scaf6	94	36.017	Drosophila_melanogaster
ENSXCOG00000005936	cherp	98	94.118	ENSGAFG00000004421	cherp	91	94.118	Gambusia_affinis
ENSXCOG00000005936	cherp	97	82.880	ENSORLG00020013142	cherp	82	85.890	Oryzias_latipes_hni
ENSXCOG00000005936	cherp	96	83.836	ENSOMEG00000016947	cherp	75	88.323	Oryzias_melastigma
ENSXCOG00000005936	cherp	87	53.314	ENSPMAG00000001655	-	96	54.438	Petromyzon_marinus
ENSXCOG00000005936	cherp	99	93.883	ENSPLAG00000003350	cherp	99	93.883	Poecilia_latipinna
ENSXCOG00000005936	cherp	98	70.292	ENSSFOG00015008022	cherp	85	76.946	Scleropages_formosus
ENSXCOG00000005936	cherp	92	97.721	ENSXMAG00000008026	cherp	92	97.721	Xiphophorus_maculatus