EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000005943 (Gene tree)
Gene ID
-
Gene Symbol
hdlbpa
Alias
HBP|cb591|cb811|hdlbp|wu:fb36d01|wu:fb94h08|wu:fc23d06|wu:fc75h07
Full Name
high density lipoprotein binding protein a
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Minus strand
Length
9391 bases
Position
chrKQ557224.1:3357036-3366426
Accession
ZDB-GENE-030131-2032
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000007737KH_1PF00013.291.1e-180114
ENSXCOP00000007737KH_1PF00013.291.1e-180214
ENSXCOP00000007737KH_1PF00013.291.1e-180314
ENSXCOP00000007737KH_1PF00013.291.1e-180414
ENSXCOP00000007737KH_1PF00013.291.1e-180514
ENSXCOP00000007737KH_1PF00013.291.1e-180614
ENSXCOP00000007737KH_1PF00013.291.1e-180714
ENSXCOP00000007737KH_1PF00013.291.1e-180814
ENSXCOP00000007737KH_1PF00013.291.1e-180914
ENSXCOP00000007737KH_1PF00013.291.1e-1801014
ENSXCOP00000007737KH_1PF00013.291.1e-1801114
ENSXCOP00000007737KH_1PF00013.291.1e-1801214
ENSXCOP00000007737KH_1PF00013.291.1e-1801314
ENSXCOP00000007737KH_1PF00013.291.1e-1801414
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000007834-3774-ENSXCOP000000077371257 (aa)--
Gene Model
Click here to download ENSXCOG00000005943's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000005943's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000005943hdlbpa10054.045ENSXCOG00000001797hdlbpb10053.906
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000005943hdlbpa9978.319ENSG00000115677HDLBP10082.589Homo_sapiens
ENSXCOG00000005943hdlbpa10092.459ENSAPOG00000012609hdlbpa10092.380Acanthochromis_polyacanthus
ENSXCOG00000005943hdlbpa9978.370ENSAMEG00000016552HDLBP10078.370Ailuropoda_melanoleuca
ENSXCOG00000005943hdlbpa10087.719ENSACIG00000006015hdlbpa10087.544Amphilophus_citrinellus
ENSXCOG00000005943hdlbpa10092.537ENSAOCG00000000300hdlbpa10092.459Amphiprion_ocellaris
ENSXCOG00000005943hdlbpa10092.459ENSAPEG00000000522hdlbpa9993.456Amphiprion_percula
ENSXCOG00000005943hdlbpa10090.888ENSATEG00000009748hdlbpa10090.731Anabas_testudineus
ENSXCOG00000005943hdlbpa9979.183ENSACAG00000001556HDLBP10079.183Anolis_carolinensis
ENSXCOG00000005943hdlbpa9978.162ENSANAG00000020545HDLBP10078.162Aotus_nancymaae
ENSXCOG00000005943hdlbpa10091.438ENSACLG00000025965hdlbpa10091.438Astatotilapia_calliptera
ENSXCOG00000005943hdlbpa9390.000ENSAMXG00000004221hdlbpa10090.000Astyanax_mexicanus
ENSXCOG00000005943hdlbpa9978.286ENSBTAG00000004315HDLBP10077.455Bos_taurus
ENSXCOG00000005943hdlbpa9978.039ENSCJAG00000006152HDLBP10078.039Callithrix_jacchus
ENSXCOG00000005943hdlbpa9978.397ENSCAFG00000012913HDLBP10078.934Canis_familiaris
ENSXCOG00000005943hdlbpa9978.397ENSCAFG00020025089HDLBP10078.397Canis_lupus_dingo
ENSXCOG00000005943hdlbpa9977.612ENSCHIG00000022364HDLBP10077.612Capra_hircus
ENSXCOG00000005943hdlbpa9977.690ENSTSYG00000002379HDLBP10077.690Carlito_syrichta
ENSXCOG00000005943hdlbpa9975.197ENSCAPG00000008584HDLBP10075.197Cavia_aperea
ENSXCOG00000005943hdlbpa9978.268ENSCPOG00000006297HDLBP10078.268Cavia_porcellus
ENSXCOG00000005943hdlbpa9978.240ENSCCAG00000023361-10078.240Cebus_capucinus
ENSXCOG00000005943hdlbpa9255.025ENSCCAG00000037920-10055.080Cebus_capucinus
ENSXCOG00000005943hdlbpa9978.413ENSCATG00000039363HDLBP10078.240Cercocebus_atys
ENSXCOG00000005943hdlbpa9978.425ENSCLAG00000002365HDLBP10078.425Chinchilla_lanigera
ENSXCOG00000005943hdlbpa9977.227ENSCSAG00000005781HDLBP10077.227Chlorocebus_sabaeus
ENSXCOG00000005943hdlbpa9359.223ENSCHOG00000003882-9959.239Choloepus_hoffmanni
ENSXCOG00000005943hdlbpa9977.533ENSCPBG00000002442HDLBP10077.533Chrysemys_picta_bellii
ENSXCOG00000005943hdlbpa9978.397ENSCANG00000033571HDLBP10078.397Colobus_angolensis_palliatus
ENSXCOG00000005943hdlbpa9978.240ENSCGRG00001006086Hdlbp10078.240Cricetulus_griseus_chok1gshd
ENSXCOG00000005943hdlbpa9043.158ENSCGRG000010105704921511C20Rik10043.158Cricetulus_griseus_chok1gshd
ENSXCOG00000005943hdlbpa9978.240ENSCGRG00000014444Hdlbp10078.240Cricetulus_griseus_crigri
ENSXCOG00000005943hdlbpa9743.847ENSCGRG00000015720Gm3829743.602Cricetulus_griseus_crigri
ENSXCOG00000005943hdlbpa10090.615ENSCSEG00000008853hdlbpa10090.615Cynoglossus_semilaevis
ENSXCOG00000005943hdlbpa10094.016ENSCVAG00000017892hdlbpa10093.858Cyprinodon_variegatus
ENSXCOG00000005943hdlbpa10087.431ENSDARG00000009830hdlbpa10087.667Danio_rerio
ENSXCOG00000005943hdlbpa9976.466ENSDNOG00000006753HDLBP10076.466Dasypus_novemcinctus
ENSXCOG00000005943hdlbpa9873.600ENSETEG00000005416-7873.600Echinops_telfairi
ENSXCOG00000005943hdlbpa9978.397ENSEASG00005008249HDLBP10078.397Equus_asinus_asinus
ENSXCOG00000005943hdlbpa9978.397ENSECAG00000012829HDLBP10078.397Equus_caballus
ENSXCOG00000005943hdlbpa9851.835ENSECAG00000030885-9652.622Equus_caballus
ENSXCOG00000005943hdlbpa9947.429ENSECAG00000028723-9747.429Equus_caballus
ENSXCOG00000005943hdlbpa9372.697ENSEEUG00000014648HDLBP9572.697Erinaceus_europaeus
ENSXCOG00000005943hdlbpa10085.438ENSELUG00000010700hdlbpa10085.438Esox_lucius
ENSXCOG00000005943hdlbpa9978.431ENSFCAG00000010455HDLBP10078.431Felis_catus
ENSXCOG00000005943hdlbpa9980.440ENSFALG00000003437HDLBP10080.440Ficedula_albicollis
ENSXCOG00000005943hdlbpa9978.521ENSFDAG00000000456HDLBP10078.521Fukomys_damarensis
ENSXCOG00000005943hdlbpa10094.025ENSFHEG00000004848hdlbpa10094.025Fundulus_heteroclitus
ENSXCOG00000005943hdlbpa10086.656ENSGMOG00000009932hdlbpa10086.499Gadus_morhua
ENSXCOG00000005943hdlbpa9980.126ENSGALG00000005823HDLBP10080.440Gallus_gallus
ENSXCOG00000005943hdlbpa10062.880ENSGAFG00000016766hdlbpa10062.880Gambusia_affinis
ENSXCOG00000005943hdlbpa10088.356ENSGACG00000004648hdlbpa10088.434Gasterosteus_aculeatus
ENSXCOG00000005943hdlbpa9980.047ENSGAGG00000004256HDLBP10080.047Gopherus_agassizii
ENSXCOG00000005943hdlbpa9978.319ENSGGOG00000004392HDLBP9880.716Gorilla_gorilla
ENSXCOG00000005943hdlbpa10091.595ENSHBUG00000001136hdlbpa10091.595Haplochromis_burtoni
ENSXCOG00000005943hdlbpa9978.049ENSHGLG00000004910HDLBP10078.049Heterocephalus_glaber_female
ENSXCOG00000005943hdlbpa9978.049ENSHGLG00100013326HDLBP10080.337Heterocephalus_glaber_male
ENSXCOG00000005943hdlbpa10089.412ENSHCOG00000014837hdlbpa10089.255Hippocampus_comes
ENSXCOG00000005943hdlbpa8977.820ENSIPUG00000013177-9477.820Ictalurus_punctatus
ENSXCOG00000005943hdlbpa10087.451ENSIPUG00000013088hdlbp10087.451Ictalurus_punctatus
ENSXCOG00000005943hdlbpa9977.874ENSSTOG00000013331HDLBP10078.442Ictidomys_tridecemlineatus
ENSXCOG00000005943hdlbpa9240.345ENSJJAG00000013712-9440.345Jaculus_jaculus
ENSXCOG00000005943hdlbpa9978.633ENSJJAG00000003596Hdlbp10078.633Jaculus_jaculus
ENSXCOG00000005943hdlbpa10091.503ENSKMAG00000007571hdlbpa10091.581Kryptolebias_marmoratus
ENSXCOG00000005943hdlbpa10090.547ENSLBEG00000027461hdlbpa10090.312Labrus_bergylta
ENSXCOG00000005943hdlbpa10082.810ENSLACG00000003592HDLBP10082.810Latimeria_chalumnae
ENSXCOG00000005943hdlbpa10085.793ENSLOCG00000006278hdlbpa10085.793Lepisosteus_oculatus
ENSXCOG00000005943hdlbpa9977.926ENSLAFG00000014826HDLBP10077.926Loxodonta_africana
ENSXCOG00000005943hdlbpa9978.240ENSMFAG00000033641HDLBP10078.240Macaca_fascicularis
ENSXCOG00000005943hdlbpa9978.549ENSMMUG00000004730HDLBP10078.549Macaca_mulatta
ENSXCOG00000005943hdlbpa9978.240ENSMNEG00000024260HDLBP10078.240Macaca_nemestrina
ENSXCOG00000005943hdlbpa9978.240ENSMLEG00000042734HDLBP10078.240Mandrillus_leucophaeus
ENSXCOG00000005943hdlbpa10090.966ENSMAMG00000008611hdlbpa10091.045Mastacembelus_armatus
ENSXCOG00000005943hdlbpa10091.438ENSMZEG00005009513hdlbpa10091.438Maylandia_zebra
ENSXCOG00000005943hdlbpa9977.848ENSMGAG00000003686HDLBP10081.003Meleagris_gallopavo
ENSXCOG00000005943hdlbpa9978.397ENSMAUG00000017743Hdlbp10078.397Mesocricetus_auratus
ENSXCOG00000005943hdlbpa9978.633ENSMICG00000004569HDLBP10078.633Microcebus_murinus
ENSXCOG00000005943hdlbpa9978.476ENSMOCG00000006679Hdlbp10078.476Microtus_ochrogaster
ENSXCOG00000005943hdlbpa9885.922ENSMMOG00000006880hdlbpa9985.680Mola_mola
ENSXCOG00000005943hdlbpa9978.488ENSMODG00000016033HDLBP10078.488Monodelphis_domestica
ENSXCOG00000005943hdlbpa10090.267ENSMALG00000015095hdlbpa10090.267Monopterus_albus
ENSXCOG00000005943hdlbpa9041.053MGP_CAROLIEiJ_G00333744921511C20Rik10041.053Mus_caroli
ENSXCOG00000005943hdlbpa9643.575MGP_CAROLIEiJ_G0033373Gm3829643.446Mus_caroli
ENSXCOG00000005943hdlbpa9978.397MGP_CAROLIEiJ_G0014456Hdlbp10080.337Mus_caroli
ENSXCOG00000005943hdlbpa9642.681ENSMUSG00000062791Gm3829642.387Mus_musculus
ENSXCOG00000005943hdlbpa9978.397ENSMUSG00000034088Hdlbp10080.337Mus_musculus
ENSXCOG00000005943hdlbpa9041.474ENSMUSG000000498154921511C20Rik10041.474Mus_musculus
ENSXCOG00000005943hdlbpa9978.319MGP_PahariEiJ_G0027692Hdlbp10080.337Mus_pahari
ENSXCOG00000005943hdlbpa9643.421MGP_PahariEiJ_G0031913Gm3829642.963Mus_pahari
ENSXCOG00000005943hdlbpa8940.506MGP_PahariEiJ_G00319144921511C20Rik10040.506Mus_pahari
ENSXCOG00000005943hdlbpa9978.397MGP_SPRETEiJ_G0015260Hdlbp10080.337Mus_spretus
ENSXCOG00000005943hdlbpa9040.717MGP_SPRETEiJ_G00345394921511C20Rik10040.717Mus_spretus
ENSXCOG00000005943hdlbpa9642.387MGP_SPRETEiJ_G0034538Gm3829642.387Mus_spretus
ENSXCOG00000005943hdlbpa9978.493ENSMPUG00000000163HDLBP10078.493Mustela_putorius_furo
ENSXCOG00000005943hdlbpa9978.363ENSMLUG00000005628HDLBP10078.363Myotis_lucifugus
ENSXCOG00000005943hdlbpa9978.712ENSNGAG00000014873Hdlbp10078.712Nannospalax_galili
ENSXCOG00000005943hdlbpa9892.196ENSNBRG00000000051hdlbpa9992.357Neolamprologus_brichardi
ENSXCOG00000005943hdlbpa9978.162ENSNLEG00000013818HDLBP9981.841Nomascus_leucogenys
ENSXCOG00000005943hdlbpa9574.016ENSNLEG00000031018-9976.157Nomascus_leucogenys
ENSXCOG00000005943hdlbpa9984.642ENSMEUG00000008427HDLBP8884.642Notamacropus_eugenii
ENSXCOG00000005943hdlbpa9478.494ENSOPRG00000011965-9478.494Ochotona_princeps
ENSXCOG00000005943hdlbpa9973.858ENSODEG00000017391-10073.858Octodon_degus
ENSXCOG00000005943hdlbpa9977.795ENSODEG00000012313-10077.795Octodon_degus
ENSXCOG00000005943hdlbpa10091.202ENSONIG00000019272hdlbpa10091.202Oreochromis_niloticus
ENSXCOG00000005943hdlbpa6488.732ENSOANG00000021864-9989.209Ornithorhynchus_anatinus
ENSXCOG00000005943hdlbpa9979.167ENSOANG00000011759-10079.088Ornithorhynchus_anatinus
ENSXCOG00000005943hdlbpa9978.240ENSOCUG00000012667HDLBP10078.240Oryctolagus_cuniculus
ENSXCOG00000005943hdlbpa10091.023ENSORLG00000002226hdlbpa10091.023Oryzias_latipes
ENSXCOG00000005943hdlbpa10091.023ENSORLG00020007905hdlbpa10091.023Oryzias_latipes_hni
ENSXCOG00000005943hdlbpa10091.257ENSORLG00015004126hdlbpa10091.257Oryzias_latipes_hsok
ENSXCOG00000005943hdlbpa10088.332ENSOMEG00000000247hdlbpa10088.645Oryzias_melastigma
ENSXCOG00000005943hdlbpa9977.690ENSOGAG00000000738HDLBP10077.690Otolemur_garnettii
ENSXCOG00000005943hdlbpa9975.781ENSOARG00000017870HDLBP10075.547Ovis_aries
ENSXCOG00000005943hdlbpa9978.162ENSPPAG00000023318HDLBP9880.716Pan_paniscus
ENSXCOG00000005943hdlbpa9978.510ENSPPRG00000010215HDLBP10078.510Panthera_pardus
ENSXCOG00000005943hdlbpa9380.165ENSPTIG00000009328HDLBP9782.368Panthera_tigris_altaica
ENSXCOG00000005943hdlbpa9978.240ENSPTRG00000013121HDLBP9880.716Pan_troglodytes
ENSXCOG00000005943hdlbpa9978.162ENSPANG00000011832HDLBP10078.162Papio_anubis
ENSXCOG00000005943hdlbpa10086.028ENSPKIG00000002392hdlbpa10086.028Paramormyrops_kingsleyae
ENSXCOG00000005943hdlbpa9580.517ENSPSIG00000010068HDLBP10080.517Pelodiscus_sinensis
ENSXCOG00000005943hdlbpa10079.298ENSPMGG00000002102hdlbpa10078.957Periophthalmus_magnuspinnatus
ENSXCOG00000005943hdlbpa9978.555ENSPEMG00000017704Hdlbp10078.555Peromyscus_maniculatus_bairdii
ENSXCOG00000005943hdlbpa9979.291ENSPCIG00000015375HDLBP9479.291Phascolarctos_cinereus
ENSXCOG00000005943hdlbpa10097.013ENSPFOG00000000236hdlbpa10097.013Poecilia_formosa
ENSXCOG00000005943hdlbpa9596.841ENSPLAG00000006033hdlbpa10096.841Poecilia_latipinna
ENSXCOG00000005943hdlbpa10097.013ENSPMEG00000006627hdlbpa10097.013Poecilia_mexicana
ENSXCOG00000005943hdlbpa10069.224ENSPREG00000014450hdlbpa10069.113Poecilia_reticulata
ENSXCOG00000005943hdlbpa9978.083ENSPPYG00000013351HDLBP10078.083Pongo_abelii
ENSXCOG00000005943hdlbpa9974.689ENSPCAG00000011136HDLBP7974.689Procavia_capensis
ENSXCOG00000005943hdlbpa9375.315ENSPCOG00000021622HDLBP9275.315Propithecus_coquereli
ENSXCOG00000005943hdlbpa9977.655ENSPVAG00000000555HDLBP10077.655Pteropus_vampyrus
ENSXCOG00000005943hdlbpa10091.516ENSPNYG00000020753hdlbpa10091.516Pundamilia_nyererei
ENSXCOG00000005943hdlbpa10084.810ENSPNAG00000029610hdlbpa10084.810Pygocentrus_nattereri
ENSXCOG00000005943hdlbpa9440.852ENSRNOG00000042823RGD15612309640.852Rattus_norvegicus
ENSXCOG00000005943hdlbpa8941.309ENSRNOG00000028847AABR07040251.110041.309Rattus_norvegicus
ENSXCOG00000005943hdlbpa9643.990ENSRNOG00000031294RGD15631049743.990Rattus_norvegicus
ENSXCOG00000005943hdlbpa9978.319ENSRNOG00000031479Hdlbp9979.459Rattus_norvegicus
ENSXCOG00000005943hdlbpa9978.319ENSRBIG00000041381HDLBP10078.319Rhinopithecus_bieti
ENSXCOG00000005943hdlbpa9978.319ENSRROG00000034263HDLBP10078.319Rhinopithecus_roxellana
ENSXCOG00000005943hdlbpa9978.066ENSSBOG00000029714-9680.992Saimiri_boliviensis_boliviensis
ENSXCOG00000005943hdlbpa9269.085ENSSBOG00000033067-9668.998Saimiri_boliviensis_boliviensis
ENSXCOG00000005943hdlbpa9979.340ENSSHAG00000012422HDLBP10079.340Sarcophilus_harrisii
ENSXCOG00000005943hdlbpa10087.579ENSSFOG00015018627hdlbp10087.579Scleropages_formosus
ENSXCOG00000005943hdlbpa10090.718ENSSMAG00000002382hdlbpa10090.640Scophthalmus_maximus
ENSXCOG00000005943hdlbpa10091.451ENSSDUG00000022258hdlbpa10091.216Seriola_dumerili
ENSXCOG00000005943hdlbpa10091.451ENSSLDG00000004437hdlbpa10091.216Seriola_lalandi_dorsalis
ENSXCOG00000005943hdlbpa9468.037ENSSARG00000012639HDLBP9468.037Sorex_araneus
ENSXCOG00000005943hdlbpa9979.026ENSSPUG00000009182HDLBP10079.026Sphenodon_punctatus
ENSXCOG00000005943hdlbpa10092.072ENSSPAG00000009145hdlbpa10091.994Stegastes_partitus
ENSXCOG00000005943hdlbpa9977.376ENSSSCG00000016379HDLBP10077.750Sus_scrofa
ENSXCOG00000005943hdlbpa9581.291ENSTGUG00000006189HDLBP10081.946Taeniopygia_guttata
ENSXCOG00000005943hdlbpa10089.072ENSTRUG00000012148hdlbpa10088.836Takifugu_rubripes
ENSXCOG00000005943hdlbpa9988.871ENSTNIG00000004185hdlbpa10088.633Tetraodon_nigroviridis
ENSXCOG00000005943hdlbpa8874.214ENSTBEG00000001860HDLBP8874.214Tupaia_belangeri
ENSXCOG00000005943hdlbpa9981.282ENSTTRG00000015251HDLBP7781.282Tursiops_truncatus
ENSXCOG00000005943hdlbpa9978.633ENSUAMG00000018383HDLBP10079.213Ursus_americanus
ENSXCOG00000005943hdlbpa9978.555ENSUMAG00000010539HDLBP10078.555Ursus_maritimus
ENSXCOG00000005943hdlbpa9255.371ENSVPAG00000003112HDLBP9255.444Vicugna_pacos
ENSXCOG00000005943hdlbpa9479.483ENSVVUG00000022797HDLBP9979.638Vulpes_vulpes
ENSXCOG00000005943hdlbpa9977.978ENSXETG00000012164hdlbp9977.978Xenopus_tropicalis
ENSXCOG00000005943hdlbpa10097.887ENSXMAG00000003787hdlbpa10097.887Xiphophorus_maculatus

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