EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000005996 (Gene tree)
Gene ID: -
Gene Symbol: rbm4.3 (1 of many)
Alias: -
Full Name: RNA binding motif protein 4.3
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 3954 bases
Position: chrKQ557206.1:3916006-3919959
Accession: ZDB-GENE-040426-1938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000007809	RRM_5	PF13893.6	2.1e-07	1	2
ENSXCOP00000007809	RRM_5	PF13893.6	2.1e-07	2	2
ENSXCOP00000007809	RRM_1	PF00076.22	2.7e-27	1	2
ENSXCOP00000007809	RRM_1	PF00076.22	2.7e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000007907	-	1038	-	ENSXCOP00000007809	345 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000005996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000005996's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000005996	rbm4.3	96	53.595	ENSXCOG00000003731	rbm4.1	60	53.741
ENSXCOG00000005996	rbm4.3	97	64.244	ENSXCOG00000006001	rbm4.3	97	62.974

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000005996	rbm4.3	97	65.598	ENSAPOG00000002953	rbm4.3	97	65.205	Acanthochromis_polyacanthus
ENSXCOG00000005996	rbm4.3	99	76.301	ENSAPOG00000002991	rbm4.3	99	75.723	Acanthochromis_polyacanthus
ENSXCOG00000005996	rbm4.3	97	79.403	ENSACIG00000021295	rbm4.3	96	78.507	Amphilophus_citrinellus
ENSXCOG00000005996	rbm4.3	97	62.059	ENSACIG00000021311	-	97	61.765	Amphilophus_citrinellus
ENSXCOG00000005996	rbm4.3	97	77.015	ENSAOCG00000007992	rbm4.3	96	76.418	Amphiprion_ocellaris
ENSXCOG00000005996	rbm4.3	97	65.882	ENSAOCG00000008015	rbm4.3	97	65.588	Amphiprion_ocellaris
ENSXCOG00000005996	rbm4.3	97	67.941	ENSAPEG00000017324	rbm4.3	97	65.782	Amphiprion_percula
ENSXCOG00000005996	rbm4.3	97	77.015	ENSAPEG00000017288	rbm4.3	96	76.418	Amphiprion_percula
ENSXCOG00000005996	rbm4.3	99	75.652	ENSATEG00000019395	rbm4.3	99	76.232	Anabas_testudineus
ENSXCOG00000005996	rbm4.3	97	65.385	ENSATEG00000019375	rbm4.3	97	64.897	Anabas_testudineus
ENSXCOG00000005996	rbm4.3	97	62.647	ENSACLG00000010620	-	97	62.757	Astatotilapia_calliptera
ENSXCOG00000005996	rbm4.3	97	81.194	ENSACLG00000010642	rbm4.3	96	80.896	Astatotilapia_calliptera
ENSXCOG00000005996	rbm4.3	52	70.166	ENSAMXG00000040224	rbm4.3	61	74.830	Astyanax_mexicanus
ENSXCOG00000005996	rbm4.3	100	61.517	ENSCSEG00000013659	rbm4.3	97	62.281	Cynoglossus_semilaevis
ENSXCOG00000005996	rbm4.3	97	63.848	ENSCVAG00000008508	rbm4.3	97	62.974	Cyprinodon_variegatus
ENSXCOG00000005996	rbm4.3	98	87.316	ENSCVAG00000008502	rbm4.3	97	87.688	Cyprinodon_variegatus
ENSXCOG00000005996	rbm4.3	95	65.569	ENSDARG00000022129	rbm4.3	97	62.353	Danio_rerio
ENSXCOG00000005996	rbm4.3	99	68.079	ENSELUG00000022155	rbm4.3	97	65.598	Esox_lucius
ENSXCOG00000005996	rbm4.3	99	66.573	ENSELUG00000022150	rbm4.3	96	64.307	Esox_lucius
ENSXCOG00000005996	rbm4.3	100	65.156	ENSELUG00000022168	rbm4.3	97	65.396	Esox_lucius
ENSXCOG00000005996	rbm4.3	80	66.786	ENSFHEG00000023137	rbm4.3	87	66.904	Fundulus_heteroclitus
ENSXCOG00000005996	rbm4.3	97	76.765	ENSFHEG00000023096	rbm4.3	97	79.179	Fundulus_heteroclitus
ENSXCOG00000005996	rbm4.3	97	89.851	ENSGAFG00000001935	rbm4.3	97	89.254	Gambusia_affinis
ENSXCOG00000005996	rbm4.3	97	75.225	ENSGACG00000019980	rbm4.3	95	71.217	Gasterosteus_aculeatus
ENSXCOG00000005996	rbm4.3	97	80.896	ENSHBUG00000009051	rbm4.3	96	80.597	Haplochromis_burtoni
ENSXCOG00000005996	rbm4.3	97	62.647	ENSHBUG00000009020	-	97	62.757	Haplochromis_burtoni
ENSXCOG00000005996	rbm4.3	95	59.281	ENSHCOG00000010349	rbm4.3	96	58.284	Hippocampus_comes
ENSXCOG00000005996	rbm4.3	99	64.387	ENSHCOG00000010363	rbm4.3	94	65.680	Hippocampus_comes
ENSXCOG00000005996	rbm4.3	97	62.500	ENSIPUG00000022943	RBM4B	97	61.516	Ictalurus_punctatus
ENSXCOG00000005996	rbm4.3	95	77.341	ENSKMAG00000014541	rbm4.3	95	76.716	Kryptolebias_marmoratus
ENSXCOG00000005996	rbm4.3	100	59.429	ENSKMAG00000017468	rbm4.3	97	60.234	Kryptolebias_marmoratus
ENSXCOG00000005996	rbm4.3	97	64.012	ENSLBEG00000001071	-	97	63.824	Labrus_bergylta
ENSXCOG00000005996	rbm4.3	57	79.082	ENSLBEG00000001025	rbm4.3	89	78.061	Labrus_bergylta
ENSXCOG00000005996	rbm4.3	95	53.973	ENSLOCG00000002755	rbm4.3	97	55.405	Lepisosteus_oculatus
ENSXCOG00000005996	rbm4.3	97	66.372	ENSMAMG00000004715	-	81	65.882	Mastacembelus_armatus
ENSXCOG00000005996	rbm4.3	99	76.812	ENSMAMG00000004701	rbm4.3	99	76.812	Mastacembelus_armatus
ENSXCOG00000005996	rbm4.3	97	59.412	ENSMZEG00005007417	-	97	59.531	Maylandia_zebra
ENSXCOG00000005996	rbm4.3	97	81.194	ENSMZEG00005028540	rbm4.3	96	80.896	Maylandia_zebra
ENSXCOG00000005996	rbm4.3	84	58.054	ENSMZEG00005028537	-	81	59.322	Maylandia_zebra
ENSXCOG00000005996	rbm4.3	85	81.695	ENSMZEG00005007441	rbm4.3	78	80.623	Maylandia_zebra
ENSXCOG00000005996	rbm4.3	97	73.669	ENSMMOG00000012191	rbm4.3	96	73.591	Mola_mola
ENSXCOG00000005996	rbm4.3	90	74.441	ENSMALG00000003032	rbm4.3	95	75.080	Monopterus_albus
ENSXCOG00000005996	rbm4.3	86	63.816	ENSMALG00000003001	rbm4.3	86	64.164	Monopterus_albus
ENSXCOG00000005996	rbm4.3	99	74.203	ENSMALG00000015014	-	93	76.398	Monopterus_albus
ENSXCOG00000005996	rbm4.3	97	81.194	ENSNBRG00000012372	rbm4.3	96	80.000	Neolamprologus_brichardi
ENSXCOG00000005996	rbm4.3	97	79.882	ENSONIG00000018378	rbm4.3	96	78.698	Oreochromis_niloticus
ENSXCOG00000005996	rbm4.3	97	62.647	ENSONIG00000018380	-	97	62.757	Oreochromis_niloticus
ENSXCOG00000005996	rbm4.3	97	69.552	ENSORLG00000024749	rbm4.3	96	68.263	Oryzias_latipes
ENSXCOG00000005996	rbm4.3	100	57.222	ENSORLG00000012473	rbm4.3	100	56.787	Oryzias_latipes
ENSXCOG00000005996	rbm4.3	100	58.333	ENSORLG00000011589	rbm4.3	100	57.778	Oryzias_latipes
ENSXCOG00000005996	rbm4.3	99	68.497	ENSORLG00020012482	rbm4.3	97	67.964	Oryzias_latipes_hni
ENSXCOG00000005996	rbm4.3	100	58.056	ENSORLG00020012474	rbm4.3	100	57.500	Oryzias_latipes_hni
ENSXCOG00000005996	rbm4.3	100	57.222	ENSORLG00020012464	rbm4.3	100	56.787	Oryzias_latipes_hni
ENSXCOG00000005996	rbm4.3	100	57.222	ENSORLG00015013698	rbm4.3	100	58.056	Oryzias_latipes_hsok
ENSXCOG00000005996	rbm4.3	97	68.955	ENSORLG00015013721	rbm4.3	96	67.665	Oryzias_latipes_hsok
ENSXCOG00000005996	rbm4.3	100	57.500	ENSORLG00015013686	rbm4.3	100	57.064	Oryzias_latipes_hsok
ENSXCOG00000005996	rbm4.3	99	72.174	ENSOMEG00000005950	rbm4.3	99	72.464	Oryzias_melastigma
ENSXCOG00000005996	rbm4.3	99	59.167	ENSOMEG00000005929	rbm4.3	100	58.011	Oryzias_melastigma
ENSXCOG00000005996	rbm4.3	100	59.945	ENSOMEG00000005918	rbm4.3	97	59.714	Oryzias_melastigma
ENSXCOG00000005996	rbm4.3	93	63.473	ENSPKIG00000007001	rbm4.3	97	61.471	Paramormyrops_kingsleyae
ENSXCOG00000005996	rbm4.3	98	96.199	ENSPLAG00000006077	rbm4.3	99	96.199	Poecilia_latipinna
ENSXCOG00000005996	rbm4.3	100	64.607	ENSPLAG00000006131	rbm4.3	97	64.140	Poecilia_latipinna
ENSXCOG00000005996	rbm4.3	97	65.706	ENSPMEG00000024271	rbm4.3	97	64.431	Poecilia_mexicana
ENSXCOG00000005996	rbm4.3	98	96.188	ENSPMEG00000024260	rbm4.3	99	96.188	Poecilia_mexicana
ENSXCOG00000005996	rbm4.3	97	65.116	ENSPMEG00000024263	rbm4.3	97	63.848	Poecilia_mexicana
ENSXCOG00000005996	rbm4.3	99	95.954	ENSPREG00000002093	-	97	96.716	Poecilia_reticulata
ENSXCOG00000005996	rbm4.3	100	63.533	ENSPREG00000002156	rbm4.3	97	62.130	Poecilia_reticulata
ENSXCOG00000005996	rbm4.3	97	80.597	ENSPNYG00000018564	rbm4.3	96	80.299	Pundamilia_nyererei
ENSXCOG00000005996	rbm4.3	97	62.647	ENSPNYG00000018541	rbm4.3	97	62.757	Pundamilia_nyererei
ENSXCOG00000005996	rbm4.3	100	61.264	ENSPNAG00000013053	rbm4.3	97	61.932	Pygocentrus_nattereri
ENSXCOG00000005996	rbm4.3	100	59.673	ENSSFOG00015015563	rbm4.3	97	59.490	Scleropages_formosus
ENSXCOG00000005996	rbm4.3	97	65.588	ENSSMAG00000013644	rbm4.3	97	63.422	Scophthalmus_maximus
ENSXCOG00000005996	rbm4.3	97	72.321	ENSSMAG00000013653	rbm4.3	96	71.131	Scophthalmus_maximus
ENSXCOG00000005996	rbm4.3	97	65.385	ENSSDUG00000018435	rbm4.3	97	64.897	Seriola_dumerili
ENSXCOG00000005996	rbm4.3	97	75.298	ENSSDUG00000018422	rbm4.3	96	75.298	Seriola_dumerili
ENSXCOG00000005996	rbm4.3	97	65.385	ENSSLDG00000017204	rbm4.3	97	64.897	Seriola_lalandi_dorsalis
ENSXCOG00000005996	rbm4.3	97	74.702	ENSSLDG00000017182	rbm4.3	96	74.702	Seriola_lalandi_dorsalis
ENSXCOG00000005996	rbm4.3	96	75.602	ENSSPAG00000008041	rbm4.3	85	74.277	Stegastes_partitus
ENSXCOG00000005996	rbm4.3	100	64.489	ENSSPAG00000008062	rbm4.3	97	64.897	Stegastes_partitus
ENSXCOG00000005996	rbm4.3	100	63.944	ENSTRUG00000020901	rbm4.3	97	63.529	Takifugu_rubripes
ENSXCOG00000005996	rbm4.3	97	74.107	ENSTRUG00000023874	rbm4.3	96	74.405	Takifugu_rubripes
ENSXCOG00000005996	rbm4.3	100	61.473	ENSTNIG00000005668	rbm4.3	97	60.000	Tetraodon_nigroviridis
ENSXCOG00000005996	rbm4.3	98	99.413	ENSXMAG00000025173	rbm4.3	99	99.413	Xiphophorus_maculatus
ENSXCOG00000005996	rbm4.3	100	64.888	ENSXMAG00000011698	rbm4.3	97	64.431	Xiphophorus_maculatus
ENSXCOG00000005996	rbm4.3	97	63.953	ENSXMAG00000021997	rbm4.3	97	62.682	Xiphophorus_maculatus