EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000006001 (Gene tree)
Gene ID: -
Gene Symbol: rbm4.3 (1 of many)
Alias: -
Full Name: RNA binding motif protein 4.3
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 1109 bases
Position: chrKQ557206.1:3928784-3929892
Accession: ZDB-GENE-040426-1938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000007817	RRM_5	PF13893.6	1.8e-09	1	2
ENSXCOP00000007817	RRM_5	PF13893.6	1.8e-09	2	2
ENSXCOP00000007817	RRM_1	PF00076.22	3.6e-29	1	2
ENSXCOP00000007817	RRM_1	PF00076.22	3.6e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000007915	-	1023	-	ENSXCOP00000007817	340 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000006001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000006001's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000006001	rbm4.3	100	53.333	ENSXCOG00000003731	rbm4.1	65	53.333
ENSXCOG00000006001	rbm4.3	97	62.974	ENSXCOG00000005996	rbm4.3	97	64.244

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000006001	rbm4.3	97	60.882	ENSAPOG00000002991	rbm4.3	96	62.463	Acanthochromis_polyacanthus
ENSXCOG00000006001	rbm4.3	100	78.693	ENSAPOG00000002953	rbm4.3	100	76.989	Acanthochromis_polyacanthus
ENSXCOG00000006001	rbm4.3	97	62.722	ENSACIG00000021295	rbm4.3	96	65.000	Amphilophus_citrinellus
ENSXCOG00000006001	rbm4.3	100	79.825	ENSACIG00000021311	-	100	79.240	Amphilophus_citrinellus
ENSXCOG00000006001	rbm4.3	100	77.778	ENSAOCG00000008015	rbm4.3	100	76.353	Amphiprion_ocellaris
ENSXCOG00000006001	rbm4.3	97	61.765	ENSAOCG00000007992	rbm4.3	96	62.170	Amphiprion_ocellaris
ENSXCOG00000006001	rbm4.3	97	62.059	ENSAPEG00000017288	rbm4.3	96	62.170	Amphiprion_percula
ENSXCOG00000006001	rbm4.3	100	78.632	ENSAPEG00000017324	rbm4.3	100	75.783	Amphiprion_percula
ENSXCOG00000006001	rbm4.3	100	77.208	ENSATEG00000019375	rbm4.3	100	76.923	Anabas_testudineus
ENSXCOG00000006001	rbm4.3	97	66.864	ENSATEG00000019395	rbm4.3	96	65.875	Anabas_testudineus
ENSXCOG00000006001	rbm4.3	100	80.117	ENSACLG00000010620	-	100	79.532	Astatotilapia_calliptera
ENSXCOG00000006001	rbm4.3	99	63.920	ENSACLG00000010642	rbm4.3	99	63.920	Astatotilapia_calliptera
ENSXCOG00000006001	rbm4.3	61	75.238	ENSAMXG00000040224	rbm4.3	82	75.000	Astyanax_mexicanus
ENSXCOG00000006001	rbm4.3	100	74.859	ENSCSEG00000013659	rbm4.3	100	73.446	Cynoglossus_semilaevis
ENSXCOG00000006001	rbm4.3	100	89.706	ENSCVAG00000008508	rbm4.3	100	89.706	Cyprinodon_variegatus
ENSXCOG00000006001	rbm4.3	99	61.823	ENSCVAG00000008502	rbm4.3	99	63.352	Cyprinodon_variegatus
ENSXCOG00000006001	rbm4.3	95	65.396	ENSDARG00000022129	rbm4.3	97	65.205	Danio_rerio
ENSXCOG00000006001	rbm4.3	99	70.822	ENSELUG00000022155	rbm4.3	99	71.105	Esox_lucius
ENSXCOG00000006001	rbm4.3	99	70.339	ENSELUG00000022150	rbm4.3	97	68.605	Esox_lucius
ENSXCOG00000006001	rbm4.3	100	65.449	ENSELUG00000022168	rbm4.3	100	65.722	Esox_lucius
ENSXCOG00000006001	rbm4.3	81	87.726	ENSFHEG00000023137	rbm4.3	86	87.546	Fundulus_heteroclitus
ENSXCOG00000006001	rbm4.3	100	61.127	ENSGAFG00000001935	rbm4.3	100	61.236	Gambusia_affinis
ENSXCOG00000006001	rbm4.3	91	72.778	ENSGACG00000019980	rbm4.3	95	60.174	Gasterosteus_aculeatus
ENSXCOG00000006001	rbm4.3	99	63.920	ENSHBUG00000009051	rbm4.3	99	63.920	Haplochromis_burtoni
ENSXCOG00000006001	rbm4.3	100	80.117	ENSHBUG00000009020	-	100	79.532	Haplochromis_burtoni
ENSXCOG00000006001	rbm4.3	95	72.973	ENSHCOG00000010349	rbm4.3	100	72.727	Hippocampus_comes
ENSXCOG00000006001	rbm4.3	100	63.202	ENSIPUG00000022943	RBM4B	100	63.202	Ictalurus_punctatus
ENSXCOG00000006001	rbm4.3	100	80.000	ENSKMAG00000017468	rbm4.3	100	78.824	Kryptolebias_marmoratus
ENSXCOG00000006001	rbm4.3	54	70.588	ENSLBEG00000001025	rbm4.3	79	71.264	Labrus_bergylta
ENSXCOG00000006001	rbm4.3	100	75.000	ENSLBEG00000001071	-	100	71.875	Labrus_bergylta
ENSXCOG00000006001	rbm4.3	95	58.564	ENSLOCG00000002755	rbm4.3	100	61.741	Lepisosteus_oculatus
ENSXCOG00000006001	rbm4.3	100	77.208	ENSMAMG00000004715	-	84	76.353	Mastacembelus_armatus
ENSXCOG00000006001	rbm4.3	97	63.930	ENSMAMG00000004701	rbm4.3	96	63.529	Mastacembelus_armatus
ENSXCOG00000006001	rbm4.3	88	67.785	ENSMZEG00005007441	rbm4.3	79	66.892	Maylandia_zebra
ENSXCOG00000006001	rbm4.3	100	76.023	ENSMZEG00005007417	-	100	73.684	Maylandia_zebra
ENSXCOG00000006001	rbm4.3	99	63.920	ENSMZEG00005028540	rbm4.3	99	63.920	Maylandia_zebra
ENSXCOG00000006001	rbm4.3	87	72.819	ENSMZEG00005028537	-	83	72.819	Maylandia_zebra
ENSXCOG00000006001	rbm4.3	97	60.997	ENSMMOG00000012191	rbm4.3	96	62.463	Mola_mola
ENSXCOG00000006001	rbm4.3	95	63.467	ENSMALG00000015014	-	89	60.000	Monopterus_albus
ENSXCOG00000006001	rbm4.3	98	61.261	ENSMALG00000003032	rbm4.3	94	59.554	Monopterus_albus
ENSXCOG00000006001	rbm4.3	91	77.742	ENSMALG00000003001	rbm4.3	87	79.866	Monopterus_albus
ENSXCOG00000006001	rbm4.3	97	64.307	ENSNBRG00000012372	rbm4.3	96	63.422	Neolamprologus_brichardi
ENSXCOG00000006001	rbm4.3	97	63.158	ENSONIG00000018378	rbm4.3	96	62.281	Oreochromis_niloticus
ENSXCOG00000006001	rbm4.3	100	80.117	ENSONIG00000018380	-	100	79.532	Oreochromis_niloticus
ENSXCOG00000006001	rbm4.3	100	79.714	ENSORLG00000011589	rbm4.3	100	78.571	Oryzias_latipes
ENSXCOG00000006001	rbm4.3	96	57.602	ENSORLG00000024749	rbm4.3	96	57.310	Oryzias_latipes
ENSXCOG00000006001	rbm4.3	100	77.429	ENSORLG00000012473	rbm4.3	100	76.286	Oryzias_latipes
ENSXCOG00000006001	rbm4.3	100	77.429	ENSORLG00020012464	rbm4.3	100	76.286	Oryzias_latipes_hni
ENSXCOG00000006001	rbm4.3	99	57.224	ENSORLG00020012482	rbm4.3	99	57.265	Oryzias_latipes_hni
ENSXCOG00000006001	rbm4.3	100	79.714	ENSORLG00020012474	rbm4.3	100	78.571	Oryzias_latipes_hni
ENSXCOG00000006001	rbm4.3	97	56.105	ENSORLG00015013721	rbm4.3	99	56.818	Oryzias_latipes_hsok
ENSXCOG00000006001	rbm4.3	100	77.429	ENSORLG00015013686	rbm4.3	100	76.286	Oryzias_latipes_hsok
ENSXCOG00000006001	rbm4.3	100	77.714	ENSORLG00015013698	rbm4.3	100	78.857	Oryzias_latipes_hsok
ENSXCOG00000006001	rbm4.3	96	59.420	ENSOMEG00000005950	rbm4.3	96	59.238	Oryzias_melastigma
ENSXCOG00000006001	rbm4.3	97	78.466	ENSOMEG00000005929	rbm4.3	100	78.632	Oryzias_melastigma
ENSXCOG00000006001	rbm4.3	100	73.729	ENSOMEG00000005918	rbm4.3	100	74.294	Oryzias_melastigma
ENSXCOG00000006001	rbm4.3	93	67.913	ENSPKIG00000007001	rbm4.3	100	63.739	Paramormyrops_kingsleyae
ENSXCOG00000006001	rbm4.3	99	63.739	ENSPLAG00000006077	rbm4.3	99	63.842	Poecilia_latipinna
ENSXCOG00000006001	rbm4.3	100	90.544	ENSPLAG00000006131	rbm4.3	100	90.544	Poecilia_latipinna
ENSXCOG00000006001	rbm4.3	100	98.529	ENSPMEG00000024263	rbm4.3	100	98.529	Poecilia_mexicana
ENSXCOG00000006001	rbm4.3	100	90.258	ENSPMEG00000024271	rbm4.3	100	90.258	Poecilia_mexicana
ENSXCOG00000006001	rbm4.3	99	63.739	ENSPMEG00000024260	rbm4.3	99	63.456	Poecilia_mexicana
ENSXCOG00000006001	rbm4.3	100	84.527	ENSPREG00000002156	rbm4.3	100	84.527	Poecilia_reticulata
ENSXCOG00000006001	rbm4.3	99	63.352	ENSPREG00000002093	-	99	64.589	Poecilia_reticulata
ENSXCOG00000006001	rbm4.3	100	80.117	ENSPNYG00000018541	rbm4.3	100	79.532	Pundamilia_nyererei
ENSXCOG00000006001	rbm4.3	99	64.489	ENSPNYG00000018564	rbm4.3	99	64.489	Pundamilia_nyererei
ENSXCOG00000006001	rbm4.3	100	65.479	ENSPNAG00000013053	rbm4.3	100	64.738	Pygocentrus_nattereri
ENSXCOG00000006001	rbm4.3	100	62.568	ENSSFOG00015015563	rbm4.3	100	61.475	Scleropages_formosus
ENSXCOG00000006001	rbm4.3	97	63.824	ENSSMAG00000013653	rbm4.3	96	62.130	Scophthalmus_maximus
ENSXCOG00000006001	rbm4.3	100	78.063	ENSSMAG00000013644	rbm4.3	100	72.934	Scophthalmus_maximus
ENSXCOG00000006001	rbm4.3	100	77.493	ENSSDUG00000018435	rbm4.3	100	76.638	Seriola_dumerili
ENSXCOG00000006001	rbm4.3	97	64.431	ENSSDUG00000018422	rbm4.3	96	63.450	Seriola_dumerili
ENSXCOG00000006001	rbm4.3	100	77.493	ENSSLDG00000017204	rbm4.3	100	76.638	Seriola_lalandi_dorsalis
ENSXCOG00000006001	rbm4.3	97	64.035	ENSSLDG00000017182	rbm4.3	96	63.050	Seriola_lalandi_dorsalis
ENSXCOG00000006001	rbm4.3	100	77.493	ENSSPAG00000008062	rbm4.3	100	76.068	Stegastes_partitus
ENSXCOG00000006001	rbm4.3	96	60.651	ENSSPAG00000008041	rbm4.3	76	62.975	Stegastes_partitus
ENSXCOG00000006001	rbm4.3	100	75.071	ENSTRUG00000020901	rbm4.3	100	73.371	Takifugu_rubripes
ENSXCOG00000006001	rbm4.3	97	60.588	ENSTRUG00000023874	rbm4.3	96	63.930	Takifugu_rubripes
ENSXCOG00000006001	rbm4.3	100	72.934	ENSTNIG00000005668	rbm4.3	100	72.650	Tetraodon_nigroviridis
ENSXCOG00000006001	rbm4.3	100	99.706	ENSXMAG00000021997	rbm4.3	100	99.706	Xiphophorus_maculatus
ENSXCOG00000006001	rbm4.3	97	62.974	ENSXMAG00000025173	rbm4.3	99	64.773	Xiphophorus_maculatus
ENSXCOG00000006001	rbm4.3	100	90.831	ENSXMAG00000011698	rbm4.3	100	90.831	Xiphophorus_maculatus