EuRBPDB

Description

Ensembl ID: ENSXCOG00000006010 (Gene tree)
Gene ID: -
Gene Symbol: rbm4.3 (1 of many)
Alias: fb55c03|fb78a04|fj36h04|wu:fb55c03|wu:fb78a04|wu:fj36h04|zgc:56141|zgc:77000
Full Name: RNA binding motif protein 4.3
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 3072 bases
Position: chrKQ557206.1:3939007-3942078
Accession: ZDB-GENE-040426-1938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000007826	RRM_5	PF13893.6	1.6e-11	1	2
ENSXCOP00000007826	RRM_5	PF13893.6	1.6e-11	2	2
ENSXCOP00000007826	RRM_1	PF00076.22	3.1e-30	1	2
ENSXCOP00000007826	RRM_1	PF00076.22	3.1e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000007924	-	486	-	ENSXCOP00000007826	161 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000006010	rbm4.3	93	51.095	ENSXCOG00000003730	-	85	51.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000006010	rbm4.3	93	82.000	ENSAMXG00000040224	rbm4.3	63	82.000	Astyanax_mexicanus
ENSXCOG00000006010	rbm4.3	91	74.150	ENSGMOG00000004032	rbm4.3	63	74.667	Gadus_morhua
ENSXCOG00000006010	rbm4.3	92	89.855	ENSKMAG00000017456	rbm4.3	100	89.855	Kryptolebias_marmoratus
ENSXCOG00000006010	rbm4.3	93	70.000	ENSLBEG00000001025	rbm4.3	69	70.000	Labrus_bergylta
ENSXCOG00000006010	rbm4.3	93	84.667	ENSMMOG00000012143	rbm4.3	88	84.667	Mola_mola
ENSXCOG00000006010	rbm4.3	91	89.116	ENSOMEG00000021202	-	90	88.000	Oryzias_melastigma
ENSXCOG00000006010	rbm4.3	93	80.000	ENSPKIG00000007001	rbm4.3	64	80.000	Paramormyrops_kingsleyae
ENSXCOG00000006010	rbm4.3	92	72.794	ENSPMGG00000005450	-	75	72.794	Periophthalmus_magnuspinnatus
ENSXCOG00000006010	rbm4.3	93	94.667	ENSPLAG00000006107	rbm4.3	87	94.667	Poecilia_latipinna