EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXCOG00000006080 (Gene tree)
Gene ID
-
Gene Symbol
polr1b
Alias
wu:fc91a05|zgc:66298
Full Name
RNA polymerase I subunit B
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
11784 bases
Position
chrKQ557215.1:3390584-3402367
Accession
ZDB-GENE-040426-1598
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000007920RNA_pol_Rpa2_4PF06883.126.2e-2211
ENSXCOP00000007920RNA_pol_Rpb2_1PF04563.155.6e-3511
ENSXCOP00000007920RNA_pol_Rpb2_2PF04561.141.5e-0811
ENSXCOP00000007920RNA_pol_Rpb2_3PF04565.162.7e-2811
ENSXCOP00000007920RNA_pol_Rpb2_7PF04560.201.9e-2111
ENSXCOP00000007920RNA_pol_Rpb2_6PF00562.281.5e-11311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000008018-3399-ENSXCOP000000079201132 (aa)--
Gene Model
Click here to download ENSXCOG00000006080's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000006080's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000006080polr1b9976.190ENSG00000125630POLR1B9982.609Homo_sapiens
ENSXCOG00000006080polr1b10087.743ENSAPOG00000000931polr1b10087.743Acanthochromis_polyacanthus
ENSXCOG00000006080polr1b9230.182ENSAPOG00000018360polr3b9830.182Acanthochromis_polyacanthus
ENSXCOG00000006080polr1b9976.102ENSAMEG00000010826POLR1B9976.102Ailuropoda_melanoleuca
ENSXCOG00000006080polr1b10087.654ENSACIG00000002290polr1b10087.654Amphilophus_citrinellus
ENSXCOG00000006080polr1b10087.390ENSAOCG00000004249polr1b10087.390Amphiprion_ocellaris
ENSXCOG00000006080polr1b10087.478ENSAPEG00000004971polr1b10087.478Amphiprion_percula
ENSXCOG00000006080polr1b9230.176ENSAPEG00000006829polr3b9330.176Amphiprion_percula
ENSXCOG00000006080polr1b10087.919ENSATEG00000010957polr1b10087.919Anabas_testudineus
ENSXCOG00000006080polr1b9468.692ENSAPLG00000004142POLR1B9968.692Anas_platyrhynchos
ENSXCOG00000006080polr1b6178.726ENSACAG00000007117-9979.016Anolis_carolinensis
ENSXCOG00000006080polr1b5168.268ENSACAG00000005660POLR1B9968.268Anolis_carolinensis
ENSXCOG00000006080polr1b9976.211ENSANAG00000026201POLR1B9981.917Aotus_nancymaae
ENSXCOG00000006080polr1b10088.183ENSACLG00000019089polr1b10088.183Astatotilapia_calliptera
ENSXCOG00000006080polr1b10081.393ENSAMXG00000037818polr1b10081.393Astyanax_mexicanus
ENSXCOG00000006080polr1b9975.838ENSBTAG00000014166POLR1B9975.838Bos_taurus
ENSXCOG00000006080polr1b9745.463WBGene00008781rpoa-29945.463Caenorhabditis_elegans
ENSXCOG00000006080polr1b9976.102ENSCJAG00000016433POLR1B9982.246Callithrix_jacchus
ENSXCOG00000006080polr1b9975.661ENSCAFG00000007174POLR1B9975.661Canis_familiaris
ENSXCOG00000006080polr1b9975.750ENSCAFG00020017367POLR1B9975.750Canis_lupus_dingo
ENSXCOG00000006080polr1b9976.014ENSCHIG00000014527POLR1B9976.014Capra_hircus
ENSXCOG00000006080polr1b9974.956ENSTSYG00000003669POLR1B9980.254Carlito_syrichta
ENSXCOG00000006080polr1b9183.554ENSCAPG00000012821POLR1B8583.554Cavia_aperea
ENSXCOG00000006080polr1b9974.956ENSCPOG00000015744POLR1B9974.956Cavia_porcellus
ENSXCOG00000006080polr1b9976.367ENSCCAG00000035252POLR1B9982.246Cebus_capucinus
ENSXCOG00000006080polr1b6837.336ENSCATG00000035334POLR3B7137.336Cercocebus_atys
ENSXCOG00000006080polr1b9976.190ENSCATG00000037382POLR1B9982.428Cercocebus_atys
ENSXCOG00000006080polr1b9975.132ENSCLAG00000004899POLR1B9975.132Chinchilla_lanigera
ENSXCOG00000006080polr1b9976.367ENSCSAG00000016783POLR1B9976.367Chlorocebus_sabaeus
ENSXCOG00000006080polr1b8677.526ENSCHOG00000007229POLR1B9977.526Choloepus_hoffmanni
ENSXCOG00000006080polr1b9578.884ENSCPBG00000003962POLR1B9979.769Chrysemys_picta_bellii
ENSXCOG00000006080polr1b9954.329ENSCING00000003329-9954.329Ciona_intestinalis
ENSXCOG00000006080polr1b7433.655ENSCSAVG00000007982-8831.711Ciona_savignyi
ENSXCOG00000006080polr1b8541.053ENSCSAVG00000000129-7841.053Ciona_savignyi
ENSXCOG00000006080polr1b9976.102ENSCANG00000039531POLR1B9981.884Colobus_angolensis_palliatus
ENSXCOG00000006080polr1b9975.309ENSCGRG00001014254Polr1b9975.309Cricetulus_griseus_chok1gshd
ENSXCOG00000006080polr1b9975.220ENSCGRG00000017847Polr1b9975.220Cricetulus_griseus_crigri
ENSXCOG00000006080polr1b10084.568ENSCSEG00000008564polr1b10084.568Cynoglossus_semilaevis
ENSXCOG00000006080polr1b10091.711ENSCVAG00000005824polr1b10091.711Cyprinodon_variegatus
ENSXCOG00000006080polr1b9980.248ENSDARG00000077469polr1b9980.248Danio_rerio
ENSXCOG00000006080polr1b9975.625ENSDNOG00000017718POLR1B9875.573Dasypus_novemcinctus
ENSXCOG00000006080polr1b9975.044ENSDORG00000014309Polr1b9975.044Dipodomys_ordii
ENSXCOG00000006080polr1b9845.755FBgn0003278RpI1359845.755Drosophila_melanogaster
ENSXCOG00000006080polr1b8979.255ENSETEG00000004001POLR1B8979.255Echinops_telfairi
ENSXCOG00000006080polr1b5037.016ENSETEG00000011734POLR2B5037.016Echinops_telfairi
ENSXCOG00000006080polr1b5733.333ENSETEG00000017715POLR3B6133.333Echinops_telfairi
ENSXCOG00000006080polr1b6232.081ENSEBUG00000010186-6832.081Eptatretus_burgeri
ENSXCOG00000006080polr1b6470.408ENSEBUG00000015791polr1b9770.408Eptatretus_burgeri
ENSXCOG00000006080polr1b8742.623ENSEASG00005021189POLR3B9242.623Equus_asinus_asinus
ENSXCOG00000006080polr1b9975.838ENSEASG00005006504POLR1B9975.838Equus_asinus_asinus
ENSXCOG00000006080polr1b9975.838ENSECAG00000010062POLR1B9975.838Equus_caballus
ENSXCOG00000006080polr1b6834.940ENSEEUG00000009798POLR2B6834.940Erinaceus_europaeus
ENSXCOG00000006080polr1b7688.699ENSEEUG00000004559-8088.699Erinaceus_europaeus
ENSXCOG00000006080polr1b9230.137ENSELUG00000023988polr3b9530.137Esox_lucius
ENSXCOG00000006080polr1b10082.804ENSELUG00000019627polr1b10082.804Esox_lucius
ENSXCOG00000006080polr1b9976.102ENSFCAG00000008091POLR1B9981.522Felis_catus
ENSXCOG00000006080polr1b8969.436ENSFALG00000000717POLR1B10069.436Ficedula_albicollis
ENSXCOG00000006080polr1b9974.780ENSFDAG00000020976POLR1B9974.780Fukomys_damarensis
ENSXCOG00000006080polr1b7341.497ENSFHEG00000008215polr3b7541.497Fundulus_heteroclitus
ENSXCOG00000006080polr1b8688.917ENSFHEG00000000533polr1b9388.917Fundulus_heteroclitus
ENSXCOG00000006080polr1b9272.536ENSGMOG00000005847polr1b10072.536Gadus_morhua
ENSXCOG00000006080polr1b9568.651ENSGALG00000032273POLR1B9668.651Gallus_gallus
ENSXCOG00000006080polr1b10097.531ENSGAFG00000001383polr1b10097.531Gambusia_affinis
ENSXCOG00000006080polr1b10084.595ENSGACG00000003012polr1b10084.595Gasterosteus_aculeatus
ENSXCOG00000006080polr1b9578.233ENSGAGG00000016312POLR1B9978.894Gopherus_agassizii
ENSXCOG00000006080polr1b9976.014ENSGGOG00000013494POLR1B9982.428Gorilla_gorilla
ENSXCOG00000006080polr1b10088.183ENSHBUG00000012650polr1b10088.183Haplochromis_burtoni
ENSXCOG00000006080polr1b9974.691ENSHGLG00000011497POLR1B9974.691Heterocephalus_glaber_female
ENSXCOG00000006080polr1b9974.074ENSHGLG00100009371POLR1B9974.074Heterocephalus_glaber_male
ENSXCOG00000006080polr1b10080.159ENSHCOG00000000709polr1b10080.159Hippocampus_comes
ENSXCOG00000006080polr1b10081.922ENSIPUG00000018216polr1b10081.922Ictalurus_punctatus
ENSXCOG00000006080polr1b9576.909ENSSTOG00000008160POLR1B9976.909Ictidomys_tridecemlineatus
ENSXCOG00000006080polr1b9965.039ENSJJAG00000000143Polr1b9965.039Jaculus_jaculus
ENSXCOG00000006080polr1b10087.566ENSKMAG00000016037polr1b10087.566Kryptolebias_marmoratus
ENSXCOG00000006080polr1b10081.041ENSLBEG00000027396polr1b10081.305Labrus_bergylta
ENSXCOG00000006080polr1b10078.502ENSLACG00000009481POLR1B10078.502Latimeria_chalumnae
ENSXCOG00000006080polr1b9981.122ENSLOCG00000016558polr1b9981.122Lepisosteus_oculatus
ENSXCOG00000006080polr1b9975.286ENSLAFG00000007659POLR1B9981.193Loxodonta_africana
ENSXCOG00000006080polr1b8532.884ENSMFAG00000038425POLR3B8932.884Macaca_fascicularis
ENSXCOG00000006080polr1b9976.102ENSMFAG00000032912POLR1B9982.246Macaca_fascicularis
ENSXCOG00000006080polr1b9976.102ENSMMUG00000009468POLR1B9982.246Macaca_mulatta
ENSXCOG00000006080polr1b9976.190ENSMNEG00000036047POLR1B9982.246Macaca_nemestrina
ENSXCOG00000006080polr1b9972.880ENSMLEG00000030588POLR1B9982.428Mandrillus_leucophaeus
ENSXCOG00000006080polr1b10087.566ENSMAMG00000013118polr1b10087.566Mastacembelus_armatus
ENSXCOG00000006080polr1b10088.183ENSMZEG00005011850polr1b10088.183Maylandia_zebra
ENSXCOG00000006080polr1b9269.703ENSMGAG00000007074POLR1B9969.703Meleagris_gallopavo
ENSXCOG00000006080polr1b8473.810ENSMAUG00000010593Polr1b9673.810Mesocricetus_auratus
ENSXCOG00000006080polr1b9975.838ENSMICG00000013245POLR1B9975.838Microcebus_murinus
ENSXCOG00000006080polr1b9975.309ENSMOCG00000005942Polr1b9975.309Microtus_ochrogaster
ENSXCOG00000006080polr1b10085.903ENSMMOG00000008388polr1b10085.903Mola_mola
ENSXCOG00000006080polr1b9977.601ENSMODG00000006573POLR1B9977.601Monodelphis_domestica
ENSXCOG00000006080polr1b10084.656ENSMALG00000008958polr1b10084.656Monopterus_albus
ENSXCOG00000006080polr1b9576.744MGP_CAROLIEiJ_G0024281Polr1b9976.744Mus_caroli
ENSXCOG00000006080polr1b9974.603ENSMUSG00000027395Polr1b9974.603Mus_musculus
ENSXCOG00000006080polr1b8637.336MGP_PahariEiJ_G0031407Polr3b8837.336Mus_pahari
ENSXCOG00000006080polr1b9975.661MGP_PahariEiJ_G0025726Polr1b9975.661Mus_pahari
ENSXCOG00000006080polr1b9974.780MGP_SPRETEiJ_G0025201Polr1b9974.780Mus_spretus
ENSXCOG00000006080polr1b9972.310ENSMPUG00000009644POLR1B9972.310Mustela_putorius_furo
ENSXCOG00000006080polr1b9976.455ENSMLUG00000004910POLR1B9976.455Myotis_lucifugus
ENSXCOG00000006080polr1b9975.397ENSNGAG00000021472Polr1b9975.397Nannospalax_galili
ENSXCOG00000006080polr1b10088.007ENSNBRG00000017979polr1b10088.007Neolamprologus_brichardi
ENSXCOG00000006080polr1b9973.016ENSNLEG00000001656POLR1B9982.065Nomascus_leucogenys
ENSXCOG00000006080polr1b7580.080ENSMEUG00000013915POLR1B7580.080Notamacropus_eugenii
ENSXCOG00000006080polr1b9974.780ENSOPRG00000012742POLR1B9974.780Ochotona_princeps
ENSXCOG00000006080polr1b5536.986ENSOPRG00000008568POLR3B5536.986Ochotona_princeps
ENSXCOG00000006080polr1b9969.312ENSODEG00000005501POLR1B9969.312Octodon_degus
ENSXCOG00000006080polr1b10088.183ENSONIG00000010382polr1b10088.183Oreochromis_niloticus
ENSXCOG00000006080polr1b9379.600ENSOANG00000003621POLR1B9979.600Ornithorhynchus_anatinus
ENSXCOG00000006080polr1b9975.838ENSOCUG00000006058POLR1B9975.838Oryctolagus_cuniculus
ENSXCOG00000006080polr1b10087.577ENSORLG00000000890polr1b10087.577Oryzias_latipes
ENSXCOG00000006080polr1b10087.577ENSORLG00015011105polr1b10087.577Oryzias_latipes_hsok
ENSXCOG00000006080polr1b10086.696ENSOMEG00000005073polr1b10086.696Oryzias_melastigma
ENSXCOG00000006080polr1b9975.838ENSOGAG00000007367POLR1B9775.838Otolemur_garnettii
ENSXCOG00000006080polr1b9976.035ENSOARG00000020904POLR1B9976.035Ovis_aries
ENSXCOG00000006080polr1b9976.102ENSPPAG00000002774POLR1B9982.428Pan_paniscus
ENSXCOG00000006080polr1b9976.367ENSPPRG00000005760POLR1B9981.703Panthera_pardus
ENSXCOG00000006080polr1b9976.367ENSPTIG00000013496POLR1B9981.703Panthera_tigris_altaica
ENSXCOG00000006080polr1b9976.102ENSPTRG00000012366POLR1B9982.246Pan_troglodytes
ENSXCOG00000006080polr1b9976.190ENSPANG00000023423POLR1B9982.428Papio_anubis
ENSXCOG00000006080polr1b9230.018ENSPKIG00000025403polr3b9630.018Paramormyrops_kingsleyae
ENSXCOG00000006080polr1b9154.762ENSPKIG00000000008polr2b8854.762Paramormyrops_kingsleyae
ENSXCOG00000006080polr1b10078.307ENSPKIG00000007536polr1b10078.307Paramormyrops_kingsleyae
ENSXCOG00000006080polr1b9677.982ENSPSIG00000002443POLR1B9977.982Pelodiscus_sinensis
ENSXCOG00000006080polr1b10083.510ENSPMGG00000021622polr1b10083.510Periophthalmus_magnuspinnatus
ENSXCOG00000006080polr1b9183.885ENSPEMG00000008619Polr1b9383.885Peromyscus_maniculatus_bairdii
ENSXCOG00000006080polr1b7030.724ENSPMAG00000001164-9330.724Petromyzon_marinus
ENSXCOG00000006080polr1b9977.513ENSPCIG00000029738POLR1B9577.513Phascolarctos_cinereus
ENSXCOG00000006080polr1b7532.804ENSPCIG00000009510POLR3B7832.804Phascolarctos_cinereus
ENSXCOG00000006080polr1b10097.707ENSPFOG00000010484polr1b10097.707Poecilia_formosa
ENSXCOG00000006080polr1b7632.586ENSPLAG00000015107polr3b8032.586Poecilia_latipinna
ENSXCOG00000006080polr1b10097.884ENSPLAG00000007518polr1b10097.884Poecilia_latipinna
ENSXCOG00000006080polr1b10097.619ENSPMEG00000006810polr1b10097.619Poecilia_mexicana
ENSXCOG00000006080polr1b10097.178ENSPREG00000002867polr1b10097.178Poecilia_reticulata
ENSXCOG00000006080polr1b9976.014ENSPPYG00000012168POLR1B9976.014Pongo_abelii
ENSXCOG00000006080polr1b9966.872ENSPCAG00000013293POLR1B9966.872Procavia_capensis
ENSXCOG00000006080polr1b7148.819ENSPCAG00000000881POLR3B7248.819Procavia_capensis
ENSXCOG00000006080polr1b9975.573ENSPCOG00000015852POLR1B9972.615Propithecus_coquereli
ENSXCOG00000006080polr1b9272.121ENSPVAG00000005727POLR1B9272.121Pteropus_vampyrus
ENSXCOG00000006080polr1b6837.336ENSPVAG00000005861POLR3B6737.336Pteropus_vampyrus
ENSXCOG00000006080polr1b7637.831ENSPVAG00000010951POLR2B7337.831Pteropus_vampyrus
ENSXCOG00000006080polr1b10088.007ENSPNYG00000004767polr1b10088.007Pundamilia_nyererei
ENSXCOG00000006080polr1b10081.834ENSPNAG00000013503polr1b9581.834Pygocentrus_nattereri
ENSXCOG00000006080polr1b9970.174ENSRNOG00000018349Polr1b9970.174Rattus_norvegicus
ENSXCOG00000006080polr1b9976.190ENSRBIG00000019757POLR1B9982.246Rhinopithecus_bieti
ENSXCOG00000006080polr1b9842.797YPR010CRPA1359742.797Saccharomyces_cerevisiae
ENSXCOG00000006080polr1b9976.102ENSSBOG00000024562POLR1B9982.065Saimiri_boliviensis_boliviensis
ENSXCOG00000006080polr1b10076.775ENSSFOG00015004632polr1b10076.775Scleropages_formosus
ENSXCOG00000006080polr1b10086.684ENSSMAG00000013682polr1b10086.684Scophthalmus_maximus
ENSXCOG00000006080polr1b10087.654ENSSDUG00000019471polr1b10087.654Seriola_dumerili
ENSXCOG00000006080polr1b6835.870ENSSARG00000013960POLR3B8335.870Sorex_araneus
ENSXCOG00000006080polr1b8277.381ENSSPUG00000014298POLR1B10077.381Sphenodon_punctatus
ENSXCOG00000006080polr1b10088.272ENSSPAG00000006345polr1b10088.272Stegastes_partitus
ENSXCOG00000006080polr1b9976.455ENSSSCG00000008098POLR1B9972.663Sus_scrofa
ENSXCOG00000006080polr1b9169.595ENSTGUG00000005237POLR1B10069.595Taeniopygia_guttata
ENSXCOG00000006080polr1b10082.892ENSTRUG00000006581polr1b10082.892Takifugu_rubripes
ENSXCOG00000006080polr1b9982.890ENSTNIG00000002722polr1b9982.890Tetraodon_nigroviridis
ENSXCOG00000006080polr1b7341.837ENSTBEG00000017278POLR3B7141.837Tupaia_belangeri
ENSXCOG00000006080polr1b8633.112ENSTTRG00000010682POLR3B8533.112Tursiops_truncatus
ENSXCOG00000006080polr1b9976.190ENSTTRG00000010988POLR1B9976.190Tursiops_truncatus
ENSXCOG00000006080polr1b9577.395ENSUAMG00000022527-9877.395Ursus_americanus
ENSXCOG00000006080polr1b9976.190ENSUMAG00000008619POLR1B9978.170Ursus_maritimus
ENSXCOG00000006080polr1b6340.268ENSVPAG00000010478POLR3B6240.268Vicugna_pacos
ENSXCOG00000006080polr1b9369.814ENSVPAG00000011111POLR1B9369.814Vicugna_pacos
ENSXCOG00000006080polr1b9975.661ENSVVUG00000028670POLR1B9876.930Vulpes_vulpes
ENSXCOG00000006080polr1b8532.884ENSVVUG00000023101POLR3B8932.884Vulpes_vulpes
ENSXCOG00000006080polr1b9973.898ENSXETG00000013749polr1b9973.898Xenopus_tropicalis
ENSXCOG00000006080polr1b7433.198ENSXETG00000005721polr3b7533.198Xenopus_tropicalis
ENSXCOG00000006080polr1b10099.295ENSXMAG00000007723polr1b10099.295Xiphophorus_maculatus

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