EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000006122 (Gene tree)
Gene ID: -
Gene Symbol: cpeb3
Alias: si:ch211-129m12.2
Full Name: cytoplasmic polyadenylation element binding protein 3
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 44786 bases
Position: chrKQ557215.1:3686285-3731070
Accession: ZDB-GENE-090312-68
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000007974	RRM_1	PF00076.22	9.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000008072	-	1878	-	ENSXCOP00000007974	625 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000006122's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000006122's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000006122	cpeb3	100	56.681	ENSXCOG00000010345	cpeb4a	81	60.229
ENSXCOG00000006122	cpeb3	56	81.232	ENSXCOG00000008579	-	94	81.232
ENSXCOG00000006122	cpeb3	67	76.235	ENSXCOG00000006460	CPEB4	56	75.520

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000006122	cpeb3	100	71.470	ENSG00000107864	CPEB3	100	71.825	Homo_sapiens
ENSXCOG00000006122	cpeb3	100	85.524	ENSAPOG00000003625	cpeb3	100	85.377	Acanthochromis_polyacanthus
ENSXCOG00000006122	cpeb3	100	70.562	ENSAMEG00000014204	CPEB3	100	70.501	Ailuropoda_melanoleuca
ENSXCOG00000006122	cpeb3	100	84.503	ENSACIG00000001933	cpeb3	100	84.064	Amphilophus_citrinellus
ENSXCOG00000006122	cpeb3	100	88.515	ENSAOCG00000015423	cpeb3	100	88.055	Amphiprion_ocellaris
ENSXCOG00000006122	cpeb3	100	87.634	ENSATEG00000010649	cpeb3	100	86.718	Anabas_testudineus
ENSXCOG00000006122	cpeb3	100	72.464	ENSACAG00000006335	CPEB3	100	71.182	Anolis_carolinensis
ENSXCOG00000006122	cpeb3	100	69.492	ENSANAG00000037406	CPEB3	100	68.150	Aotus_nancymaae
ENSXCOG00000006122	cpeb3	100	87.749	ENSACLG00000018590	cpeb3	89	87.289	Astatotilapia_calliptera
ENSXCOG00000006122	cpeb3	100	71.037	ENSBTAG00000015450	CPEB3	94	93.377	Bos_taurus
ENSXCOG00000006122	cpeb3	100	68.970	ENSCJAG00000008495	CPEB3	100	69.817	Callithrix_jacchus
ENSXCOG00000006122	cpeb3	100	71.679	ENSCAFG00000007423	CPEB3	100	72.555	Canis_familiaris
ENSXCOG00000006122	cpeb3	100	68.392	ENSCAFG00020001981	CPEB3	92	93.137	Canis_lupus_dingo
ENSXCOG00000006122	cpeb3	100	68.524	ENSCHIG00000017337	CPEB3	100	69.038	Capra_hircus
ENSXCOG00000006122	cpeb3	88	81.221	ENSTSYG00000003928	CPEB3	82	81.308	Carlito_syrichta
ENSXCOG00000006122	cpeb3	100	69.645	ENSCCAG00000033267	CPEB3	100	68.707	Cebus_capucinus
ENSXCOG00000006122	cpeb3	100	70.714	ENSCATG00000038447	CPEB3	100	71.449	Cercocebus_atys
ENSXCOG00000006122	cpeb3	69	81.370	ENSCLAG00000011817	CPEB3	95	81.370	Chinchilla_lanigera
ENSXCOG00000006122	cpeb3	100	71.491	ENSCSAG00000006579	CPEB3	100	71.408	Chlorocebus_sabaeus
ENSXCOG00000006122	cpeb3	56	73.118	ENSCHOG00000000272	-	100	73.118	Choloepus_hoffmanni
ENSXCOG00000006122	cpeb3	100	76.126	ENSCPBG00000023779	CPEB3	100	75.831	Chrysemys_picta_bellii
ENSXCOG00000006122	cpeb3	100	70.630	ENSCANG00000040306	CPEB3	100	72.238	Colobus_angolensis_palliatus
ENSXCOG00000006122	cpeb3	100	68.245	ENSCGRG00001003846	Cpeb3	100	68.575	Cricetulus_griseus_chok1gshd
ENSXCOG00000006122	cpeb3	63	82.933	ENSCGRG00000002839	Cpeb3	100	82.933	Cricetulus_griseus_crigri
ENSXCOG00000006122	cpeb3	89	80.325	ENSCSEG00000008423	cpeb3	100	80.000	Cynoglossus_semilaevis
ENSXCOG00000006122	cpeb3	100	89.291	ENSCVAG00000005998	cpeb3	100	88.031	Cyprinodon_variegatus
ENSXCOG00000006122	cpeb3	100	74.068	ENSDARG00000060103	cpeb3	100	72.741	Danio_rerio
ENSXCOG00000006122	cpeb3	100	64.656	ENSDNOG00000048639	CPEB3	100	64.548	Dasypus_novemcinctus
ENSXCOG00000006122	cpeb3	93	86.036	ENSDORG00000028940	Cpeb3	86	86.036	Dipodomys_ordii
ENSXCOG00000006122	cpeb3	100	66.189	ENSETEG00000000111	CPEB3	100	66.043	Echinops_telfairi
ENSXCOG00000006122	cpeb3	99	56.570	ENSEBUG00000010745	cpeb3	90	56.546	Eptatretus_burgeri
ENSXCOG00000006122	cpeb3	100	69.339	ENSEASG00005011095	CPEB3	100	69.958	Equus_asinus_asinus
ENSXCOG00000006122	cpeb3	100	69.155	ENSECAG00000000077	CPEB3	100	70.056	Equus_caballus
ENSXCOG00000006122	cpeb3	100	81.098	ENSELUG00000019251	cpeb3	100	79.878	Esox_lucius
ENSXCOG00000006122	cpeb3	100	71.866	ENSFCAG00000032380	CPEB3	100	72.555	Felis_catus
ENSXCOG00000006122	cpeb3	100	75.225	ENSFALG00000007952	CPEB3	87	75.038	Ficedula_albicollis
ENSXCOG00000006122	cpeb3	88	81.567	ENSFDAG00000016459	CPEB3	85	81.651	Fukomys_damarensis
ENSXCOG00000006122	cpeb3	100	88.226	ENSFHEG00000021371	cpeb3	100	84.125	Fundulus_heteroclitus
ENSXCOG00000006122	cpeb3	88	77.152	ENSGMOG00000008307	cpeb3	99	75.828	Gadus_morhua
ENSXCOG00000006122	cpeb3	100	73.932	ENSGALG00000006912	CPEB3	100	74.227	Gallus_gallus
ENSXCOG00000006122	cpeb3	99	81.241	ENSGACG00000002944	cpeb3	99	82.891	Gasterosteus_aculeatus
ENSXCOG00000006122	cpeb3	100	76.284	ENSGAGG00000008528	CPEB3	100	75.680	Gopherus_agassizii
ENSXCOG00000006122	cpeb3	100	69.058	ENSGGOG00000016441	CPEB3	100	69.252	Gorilla_gorilla
ENSXCOG00000006122	cpeb3	100	84.593	ENSHBUG00000004097	cpeb3	93	83.602	Haplochromis_burtoni
ENSXCOG00000006122	cpeb3	100	70.749	ENSHGLG00000014022	CPEB3	100	71.014	Heterocephalus_glaber_female
ENSXCOG00000006122	cpeb3	100	67.288	ENSHGLG00100005200	CPEB3	100	67.532	Heterocephalus_glaber_male
ENSXCOG00000006122	cpeb3	100	76.682	ENSHCOG00000005747	cpeb3	100	76.233	Hippocampus_comes
ENSXCOG00000006122	cpeb3	100	75.744	ENSIPUG00000018571	cpeb3	100	74.307	Ictalurus_punctatus
ENSXCOG00000006122	cpeb3	100	69.341	ENSSTOG00000028061	CPEB3	100	69.688	Ictidomys_tridecemlineatus
ENSXCOG00000006122	cpeb3	63	83.173	ENSJJAG00000009135	Cpeb3	100	83.173	Jaculus_jaculus
ENSXCOG00000006122	cpeb3	100	83.994	ENSLBEG00000025961	cpeb3	100	83.847	Labrus_bergylta
ENSXCOG00000006122	cpeb3	100	74.924	ENSLACG00000011307	CPEB3	92	75.076	Latimeria_chalumnae
ENSXCOG00000006122	cpeb3	100	80.422	ENSLOCG00000007131	cpeb3	100	77.612	Lepisosteus_oculatus
ENSXCOG00000006122	cpeb3	100	71.449	ENSLAFG00000018716	CPEB3	100	80.083	Loxodonta_africana
ENSXCOG00000006122	cpeb3	100	67.878	ENSMFAG00000025613	CPEB3	100	68.459	Macaca_fascicularis
ENSXCOG00000006122	cpeb3	100	71.739	ENSMMUG00000015050	CPEB3	100	72.238	Macaca_mulatta
ENSXCOG00000006122	cpeb3	100	70.613	ENSMNEG00000045465	CPEB3	100	71.346	Macaca_nemestrina
ENSXCOG00000006122	cpeb3	91	81.221	ENSMLEG00000031794	CPEB3	97	81.221	Mandrillus_leucophaeus
ENSXCOG00000006122	cpeb3	100	84.875	ENSMAMG00000012794	cpeb3	100	84.581	Mastacembelus_armatus
ENSXCOG00000006122	cpeb3	100	84.911	ENSMZEG00005012068	cpeb3	100	83.333	Maylandia_zebra
ENSXCOG00000006122	cpeb3	100	75.336	ENSMGAG00000009148	CPEB3	99	74.589	Meleagris_gallopavo
ENSXCOG00000006122	cpeb3	100	71.387	ENSMAUG00000002789	Cpeb3	100	71.304	Mesocricetus_auratus
ENSXCOG00000006122	cpeb3	100	68.061	ENSMICG00000026866	CPEB3	100	68.399	Microcebus_murinus
ENSXCOG00000006122	cpeb3	100	68.239	ENSMOCG00000016486	Cpeb3	100	68.011	Microtus_ochrogaster
ENSXCOG00000006122	cpeb3	96	83.492	ENSMMOG00000008209	cpeb3	88	86.667	Mola_mola
ENSXCOG00000006122	cpeb3	100	69.916	ENSMODG00000006673	CPEB3	100	69.081	Monodelphis_domestica
ENSXCOG00000006122	cpeb3	100	86.656	ENSMALG00000009305	cpeb3	98	92.020	Monopterus_albus
ENSXCOG00000006122	cpeb3	100	71.098	MGP_CAROLIEiJ_G0022910	Cpeb3	100	83.173	Mus_caroli
ENSXCOG00000006122	cpeb3	100	72.012	ENSMUSG00000039652	Cpeb3	100	83.173	Mus_musculus
ENSXCOG00000006122	cpeb3	100	71.201	MGP_PahariEiJ_G0014405	Cpeb3	100	83.173	Mus_pahari
ENSXCOG00000006122	cpeb3	100	71.408	MGP_SPRETEiJ_G0023829	Cpeb3	100	83.173	Mus_spretus
ENSXCOG00000006122	cpeb3	100	70.791	ENSMPUG00000017227	CPEB3	100	71.470	Mustela_putorius_furo
ENSXCOG00000006122	cpeb3	100	69.633	ENSNGAG00000015621	Cpeb3	100	69.972	Nannospalax_galili
ENSXCOG00000006122	cpeb3	100	86.910	ENSNBRG00000018343	cpeb3	91	87.062	Neolamprologus_brichardi
ENSXCOG00000006122	cpeb3	100	71.698	ENSNLEG00000012600	CPEB3	100	72.198	Nomascus_leucogenys
ENSXCOG00000006122	cpeb3	80	81.267	ENSMEUG00000009948	-	75	81.267	Notamacropus_eugenii
ENSXCOG00000006122	cpeb3	90	71.406	ENSODEG00000004591	CPEB3	100	66.849	Octodon_degus
ENSXCOG00000006122	cpeb3	51	89.908	ENSOANG00000015723	-	99	89.908	Ornithorhynchus_anatinus
ENSXCOG00000006122	cpeb3	100	68.663	ENSOCUG00000010454	CPEB3	100	68.207	Oryctolagus_cuniculus
ENSXCOG00000006122	cpeb3	100	82.418	ENSORLG00000000726	cpeb3	100	84.301	Oryzias_latipes
ENSXCOG00000006122	cpeb3	100	81.221	ENSORLG00020004475	cpeb3	100	83.881	Oryzias_latipes_hni
ENSXCOG00000006122	cpeb3	100	81.690	ENSORLG00015011683	cpeb3	100	84.351	Oryzias_latipes_hsok
ENSXCOG00000006122	cpeb3	100	82.839	ENSOMEG00000018265	cpeb3	92	83.151	Oryzias_melastigma
ENSXCOG00000006122	cpeb3	100	70.930	ENSOGAG00000002002	CPEB3	100	70.725	Otolemur_garnettii
ENSXCOG00000006122	cpeb3	100	71.784	ENSOARG00000016671	CPEB3	100	72.555	Ovis_aries
ENSXCOG00000006122	cpeb3	69	79.872	ENSPPAG00000031528	CPEB3	100	63.595	Pan_paniscus
ENSXCOG00000006122	cpeb3	100	71.866	ENSPPRG00000015654	CPEB3	100	72.555	Panthera_pardus
ENSXCOG00000006122	cpeb3	67	82.207	ENSPTIG00000012018	CPEB3	97	94.483	Panthera_tigris_altaica
ENSXCOG00000006122	cpeb3	100	68.011	ENSPTRG00000002753	CPEB3	100	68.340	Pan_troglodytes
ENSXCOG00000006122	cpeb3	100	68.169	ENSPANG00000021561	CPEB3	100	68.175	Papio_anubis
ENSXCOG00000006122	cpeb3	100	81.818	ENSPKIG00000015878	cpeb3	100	79.394	Paramormyrops_kingsleyae
ENSXCOG00000006122	cpeb3	100	75.583	ENSPMGG00000022722	cpeb3	100	74.264	Periophthalmus_magnuspinnatus
ENSXCOG00000006122	cpeb3	100	71.594	ENSPEMG00000008448	Cpeb3	100	71.366	Peromyscus_maniculatus_bairdii
ENSXCOG00000006122	cpeb3	100	68.828	ENSPCIG00000017302	CPEB3	100	67.862	Phascolarctos_cinereus
ENSXCOG00000006122	cpeb3	100	89.720	ENSPFOG00000011231	cpeb3	100	90.654	Poecilia_formosa
ENSXCOG00000006122	cpeb3	100	93.627	ENSPLAG00000002852	cpeb3	100	93.627	Poecilia_latipinna
ENSXCOG00000006122	cpeb3	100	94.064	ENSPMEG00000021572	cpeb3	100	94.064	Poecilia_mexicana
ENSXCOG00000006122	cpeb3	100	93.617	ENSPREG00000003085	cpeb3	100	93.617	Poecilia_reticulata
ENSXCOG00000006122	cpeb3	100	68.513	ENSPPYG00000002481	CPEB3	100	69.197	Pongo_abelii
ENSXCOG00000006122	cpeb3	100	63.827	ENSPCAG00000012417	CPEB3	100	64.146	Procavia_capensis
ENSXCOG00000006122	cpeb3	100	69.871	ENSPCOG00000023690	CPEB3	100	71.076	Propithecus_coquereli
ENSXCOG00000006122	cpeb3	81	81.720	ENSPVAG00000007664	CPEB3	74	81.720	Pteropus_vampyrus
ENSXCOG00000006122	cpeb3	100	84.593	ENSPNYG00000005300	cpeb3	100	83.602	Pundamilia_nyererei
ENSXCOG00000006122	cpeb3	100	77.599	ENSPNAG00000012111	cpeb3	100	75.216	Pygocentrus_nattereri
ENSXCOG00000006122	cpeb3	100	69.144	ENSRNOG00000020689	Cpeb3	94	68.917	Rattus_norvegicus
ENSXCOG00000006122	cpeb3	100	68.289	ENSRBIG00000041079	CPEB3	100	68.802	Rhinopithecus_bieti
ENSXCOG00000006122	cpeb3	100	71.657	ENSRROG00000031558	CPEB3	100	72.198	Rhinopithecus_roxellana
ENSXCOG00000006122	cpeb3	67	87.234	ENSSBOG00000035843	CPEB3	99	87.234	Saimiri_boliviensis_boliviensis
ENSXCOG00000006122	cpeb3	65	77.017	ENSSFOG00015018275	-	99	77.094	Scleropages_formosus
ENSXCOG00000006122	cpeb3	100	76.126	ENSSFOG00015004974	cpeb3	100	73.669	Scleropages_formosus
ENSXCOG00000006122	cpeb3	100	86.850	ENSSMAG00000013924	cpeb3	100	86.391	Scophthalmus_maximus
ENSXCOG00000006122	cpeb3	100	86.976	ENSSDUG00000019766	cpeb3	100	86.377	Seriola_dumerili
ENSXCOG00000006122	cpeb3	100	88.974	ENSSLDG00000021438	cpeb3	100	87.902	Seriola_lalandi_dorsalis
ENSXCOG00000006122	cpeb3	56	82.258	ENSSARG00000001994	CPEB3	100	82.258	Sorex_araneus
ENSXCOG00000006122	cpeb3	100	84.761	ENSSPAG00000004725	cpeb3	100	84.325	Stegastes_partitus
ENSXCOG00000006122	cpeb3	100	71.121	ENSSSCG00000010468	CPEB3	100	72.110	Sus_scrofa
ENSXCOG00000006122	cpeb3	100	72.569	ENSTGUG00000008988	CPEB3	100	72.384	Taeniopygia_guttata
ENSXCOG00000006122	cpeb3	64	74.413	ENSTBEG00000013125	-	60	74.413	Tupaia_belangeri
ENSXCOG00000006122	cpeb3	100	65.634	ENSTTRG00000012334	CPEB3	100	65.537	Tursiops_truncatus
ENSXCOG00000006122	cpeb3	100	67.792	ENSUAMG00000010827	CPEB3	90	88.843	Ursus_americanus
ENSXCOG00000006122	cpeb3	100	71.679	ENSVVUG00000021375	CPEB3	100	72.555	Vulpes_vulpes
ENSXCOG00000006122	cpeb3	100	72.018	ENSXETG00000012190	cpeb3	98	71.775	Xenopus_tropicalis
ENSXCOG00000006122	cpeb3	100	95.426	ENSXMAG00000007652	cpeb3	100	95.426	Xiphophorus_maculatus