EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000006151 (Gene tree)
Gene ID: -
Gene Symbol: zc3h12b
Alias: si:dkey-286f3.6
Full Name: zinc finger CCCH-type containing 12B
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 4348 bases
Position: chrKQ557203.1:14048161-14052508
Accession: ZDB-GENE-060526-290
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000008008	RNase_Zc3h12a	PF11977.8	1.6e-64	1	1
ENSXCOP00000008012	RNase_Zc3h12a	PF11977.8	1.7e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000008110	-	2556	-	ENSXCOP00000008012	851 (aa)	-	-
ENSXCOT00000008106	-	2502	-	ENSXCOP00000008008	833 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000006151's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000006151's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000006151	zc3h12b	58	75.503	ENSXCOG00000007996	-	83	71.121

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000006151	zc3h12b	99	66.982	ENSG00000102053	ZC3H12B	99	66.942	Homo_sapiens
ENSXCOG00000006151	zc3h12b	100	91.187	ENSAPOG00000001738	zc3h12b	100	90.599	Acanthochromis_polyacanthus
ENSXCOG00000006151	zc3h12b	76	71.429	ENSAMEG00000006955	ZC3H12B	99	71.429	Ailuropoda_melanoleuca
ENSXCOG00000006151	zc3h12b	100	91.667	ENSACIG00000009787	zc3h12b	100	91.667	Amphilophus_citrinellus
ENSXCOG00000006151	zc3h12b	100	91.422	ENSAOCG00000010094	zc3h12b	100	90.952	Amphiprion_ocellaris
ENSXCOG00000006151	zc3h12b	100	91.304	ENSAPEG00000007479	zc3h12b	100	90.834	Amphiprion_percula
ENSXCOG00000006151	zc3h12b	100	89.906	ENSATEG00000011175	zc3h12b	100	89.085	Anabas_testudineus
ENSXCOG00000006151	zc3h12b	99	70.401	ENSACAG00000013582	ZC3H12B	99	69.906	Anolis_carolinensis
ENSXCOG00000006151	zc3h12b	99	66.941	ENSANAG00000010296	ZC3H12B	99	66.706	Aotus_nancymaae
ENSXCOG00000006151	zc3h12b	100	90.610	ENSACLG00000007669	zc3h12b	100	89.789	Astatotilapia_calliptera
ENSXCOG00000006151	zc3h12b	81	53.968	ENSAMXG00000005320	-	87	46.814	Astyanax_mexicanus
ENSXCOG00000006151	zc3h12b	79	52.485	ENSAMXG00000038308	-	86	45.573	Astyanax_mexicanus
ENSXCOG00000006151	zc3h12b	93	75.422	ENSAMXG00000011328	zc3h12b	81	75.572	Astyanax_mexicanus
ENSXCOG00000006151	zc3h12b	100	66.864	ENSBTAG00000002206	ZC3H12B	100	66.864	Bos_taurus
ENSXCOG00000006151	zc3h12b	99	66.824	ENSCJAG00000001427	ZC3H12B	99	66.353	Callithrix_jacchus
ENSXCOG00000006151	zc3h12b	99	66.036	ENSCAFG00000031307	ZC3H12B	99	66.036	Canis_familiaris
ENSXCOG00000006151	zc3h12b	99	66.036	ENSCAFG00020017995	ZC3H12B	99	66.036	Canis_lupus_dingo
ENSXCOG00000006151	zc3h12b	71	71.066	ENSCHIG00000011723	ZC3H12B	98	71.066	Capra_hircus
ENSXCOG00000006151	zc3h12b	99	67.337	ENSTSYG00000011302	ZC3H12B	99	67.337	Carlito_syrichta
ENSXCOG00000006151	zc3h12b	73	66.341	ENSCAPG00000000650	ZC3H12B	100	66.341	Cavia_aperea
ENSXCOG00000006151	zc3h12b	99	66.824	ENSCCAG00000030171	ZC3H12B	99	66.588	Cebus_capucinus
ENSXCOG00000006151	zc3h12b	99	67.101	ENSCATG00000044845	ZC3H12B	99	67.060	Cercocebus_atys
ENSXCOG00000006151	zc3h12b	99	66.982	ENSCLAG00000003600	ZC3H12B	99	66.667	Chinchilla_lanigera
ENSXCOG00000006151	zc3h12b	99	71.580	ENSCPBG00000006983	ZC3H12B	99	71.563	Chrysemys_picta_bellii
ENSXCOG00000006151	zc3h12b	99	66.982	ENSCANG00000006746	ZC3H12B	99	66.942	Colobus_angolensis_palliatus
ENSXCOG00000006151	zc3h12b	99	66.234	ENSCGRG00001018643	Zc3h12b	99	66.234	Cricetulus_griseus_chok1gshd
ENSXCOG00000006151	zc3h12b	99	66.234	ENSCGRG00000015623	Zc3h12b	99	66.234	Cricetulus_griseus_crigri
ENSXCOG00000006151	zc3h12b	99	86.288	ENSCSEG00000013686	zc3h12b	100	86.288	Cynoglossus_semilaevis
ENSXCOG00000006151	zc3h12b	100	92.849	ENSCVAG00000010473	zc3h12b	100	92.732	Cyprinodon_variegatus
ENSXCOG00000006151	zc3h12b	93	74.878	ENSDARG00000062463	zc3h12b	98	74.517	Danio_rerio
ENSXCOG00000006151	zc3h12b	99	63.059	ENSDNOG00000038439	ZC3H12B	99	63.059	Dasypus_novemcinctus
ENSXCOG00000006151	zc3h12b	99	67.409	ENSDORG00000024832	Zc3h12b	99	67.215	Dipodomys_ordii
ENSXCOG00000006151	zc3h12b	96	57.054	ENSETEG00000012095	ZC3H12B	92	58.870	Echinops_telfairi
ENSXCOG00000006151	zc3h12b	99	63.314	ENSEASG00005006995	ZC3H12B	99	62.840	Equus_asinus_asinus
ENSXCOG00000006151	zc3h12b	99	67.258	ENSECAG00000020993	ZC3H12B	99	66.785	Equus_caballus
ENSXCOG00000006151	zc3h12b	100	82.674	ENSELUG00000010689	zc3h12b	88	81.395	Esox_lucius
ENSXCOG00000006151	zc3h12b	100	65.444	ENSFCAG00000032299	ZC3H12B	100	65.006	Felis_catus
ENSXCOG00000006151	zc3h12b	99	66.864	ENSFDAG00000014258	ZC3H12B	99	66.429	Fukomys_damarensis
ENSXCOG00000006151	zc3h12b	55	76.289	ENSFHEG00000014717	-	74	74.503	Fundulus_heteroclitus
ENSXCOG00000006151	zc3h12b	100	92.398	ENSFHEG00000002391	zc3h12b	100	91.345	Fundulus_heteroclitus
ENSXCOG00000006151	zc3h12b	99	70.755	ENSGALG00000039391	ZC3H12B	99	70.457	Gallus_gallus
ENSXCOG00000006151	zc3h12b	56	74.834	ENSGAFG00000004701	-	57	74.503	Gambusia_affinis
ENSXCOG00000006151	zc3h12b	100	98.122	ENSGAFG00000006871	zc3h12b	99	98.122	Gambusia_affinis
ENSXCOG00000006151	zc3h12b	93	90.387	ENSGACG00000020334	zc3h12b	100	90.818	Gasterosteus_aculeatus
ENSXCOG00000006151	zc3h12b	99	71.580	ENSGAGG00000005569	ZC3H12B	99	71.596	Gopherus_agassizii
ENSXCOG00000006151	zc3h12b	99	66.982	ENSGGOG00000024638	ZC3H12B	99	66.942	Gorilla_gorilla
ENSXCOG00000006151	zc3h12b	100	90.493	ENSHBUG00000000645	zc3h12b	100	89.671	Haplochromis_burtoni
ENSXCOG00000006151	zc3h12b	99	66.746	ENSHGLG00000003107	ZC3H12B	99	66.429	Heterocephalus_glaber_female
ENSXCOG00000006151	zc3h12b	99	66.746	ENSHGLG00100010721	ZC3H12B	99	66.429	Heterocephalus_glaber_male
ENSXCOG00000006151	zc3h12b	99	87.234	ENSHCOG00000008487	zc3h12b	100	87.234	Hippocampus_comes
ENSXCOG00000006151	zc3h12b	93	75.000	ENSIPUG00000016745	zc3h12b	84	74.699	Ictalurus_punctatus
ENSXCOG00000006151	zc3h12b	90	47.497	ENSIPUG00000014830	-	87	48.399	Ictalurus_punctatus
ENSXCOG00000006151	zc3h12b	99	67.574	ENSSTOG00000020962	ZC3H12B	99	67.062	Ictidomys_tridecemlineatus
ENSXCOG00000006151	zc3h12b	99	65.006	ENSJJAG00000015755	Zc3h12b	99	65.006	Jaculus_jaculus
ENSXCOG00000006151	zc3h12b	100	90.717	ENSKMAG00000004921	zc3h12b	100	89.894	Kryptolebias_marmoratus
ENSXCOG00000006151	zc3h12b	99	90.962	ENSLBEG00000006448	zc3h12b	99	90.962	Labrus_bergylta
ENSXCOG00000006151	zc3h12b	99	71.194	ENSLACG00000014526	ZC3H12B	99	70.994	Latimeria_chalumnae
ENSXCOG00000006151	zc3h12b	95	51.962	ENSLOCG00000010717	-	85	54.477	Lepisosteus_oculatus
ENSXCOG00000006151	zc3h12b	99	77.476	ENSLOCG00000014631	zc3h12b	87	77.385	Lepisosteus_oculatus
ENSXCOG00000006151	zc3h12b	99	66.000	ENSLAFG00000014891	ZC3H12B	93	69.250	Loxodonta_africana
ENSXCOG00000006151	zc3h12b	99	66.864	ENSMFAG00000042237	ZC3H12B	99	66.824	Macaca_fascicularis
ENSXCOG00000006151	zc3h12b	99	66.982	ENSMMUG00000012261	ZC3H12B	99	66.942	Macaca_mulatta
ENSXCOG00000006151	zc3h12b	99	66.982	ENSMNEG00000043003	ZC3H12B	99	66.942	Macaca_nemestrina
ENSXCOG00000006151	zc3h12b	99	67.101	ENSMLEG00000042630	ZC3H12B	99	67.060	Mandrillus_leucophaeus
ENSXCOG00000006151	zc3h12b	100	89.671	ENSMAMG00000011770	zc3h12b	99	89.789	Mastacembelus_armatus
ENSXCOG00000006151	zc3h12b	100	90.610	ENSMZEG00005007548	zc3h12b	100	89.789	Maylandia_zebra
ENSXCOG00000006151	zc3h12b	99	71.986	ENSMGAG00000000759	ZC3H12B	99	70.975	Meleagris_gallopavo
ENSXCOG00000006151	zc3h12b	99	66.667	ENSMAUG00000017800	Zc3h12b	99	66.392	Mesocricetus_auratus
ENSXCOG00000006151	zc3h12b	99	67.456	ENSMICG00000010697	ZC3H12B	99	67.101	Microcebus_murinus
ENSXCOG00000006151	zc3h12b	99	66.237	ENSMOCG00000000094	Zc3h12b	93	69.241	Microtus_ochrogaster
ENSXCOG00000006151	zc3h12b	99	88.319	ENSMMOG00000008734	zc3h12b	99	88.319	Mola_mola
ENSXCOG00000006151	zc3h12b	99	67.376	ENSMODG00000005206	ZC3H12B	93	70.294	Monodelphis_domestica
ENSXCOG00000006151	zc3h12b	58	74.172	ENSMALG00000016807	-	85	57.823	Monopterus_albus
ENSXCOG00000006151	zc3h12b	100	85.024	ENSMALG00000021153	zc3h12b	100	84.434	Monopterus_albus
ENSXCOG00000006151	zc3h12b	99	65.998	ENSMUSG00000035045	Zc3h12b	99	65.362	Mus_musculus
ENSXCOG00000006151	zc3h12b	99	65.998	MGP_PahariEiJ_G0031787	Zc3h12b	91	70.000	Mus_pahari
ENSXCOG00000006151	zc3h12b	99	65.998	MGP_SPRETEiJ_G0034413	Zc3h12b	99	65.362	Mus_spretus
ENSXCOG00000006151	zc3h12b	99	65.680	ENSMPUG00000001162	ZC3H12B	99	65.325	Mustela_putorius_furo
ENSXCOG00000006151	zc3h12b	99	67.023	ENSMLUG00000013635	ZC3H12B	94	70.779	Myotis_lucifugus
ENSXCOG00000006151	zc3h12b	100	90.728	ENSNBRG00000014889	zc3h12b	100	90.023	Neolamprologus_brichardi
ENSXCOG00000006151	zc3h12b	99	67.219	ENSNLEG00000000383	ZC3H12B	99	67.060	Nomascus_leucogenys
ENSXCOG00000006151	zc3h12b	98	63.658	ENSMEUG00000014075	ZC3H12B	88	71.935	Notamacropus_eugenii
ENSXCOG00000006151	zc3h12b	100	90.035	ENSONIG00000012867	zc3h12b	100	89.412	Oreochromis_niloticus
ENSXCOG00000006151	zc3h12b	72	56.158	ENSOANG00000008267	-	75	81.455	Ornithorhynchus_anatinus
ENSXCOG00000006151	zc3h12b	99	66.824	ENSOCUG00000006130	ZC3H12B	99	66.509	Oryctolagus_cuniculus
ENSXCOG00000006151	zc3h12b	100	89.631	ENSORLG00000009556	zc3h12b	100	89.392	Oryzias_latipes
ENSXCOG00000006151	zc3h12b	57	69.527	ENSORLG00000009188	-	60	71.692	Oryzias_latipes
ENSXCOG00000006151	zc3h12b	63	69.527	ENSORLG00020019033	-	87	66.667	Oryzias_latipes_hni
ENSXCOG00000006151	zc3h12b	100	88.484	ENSORLG00020021793	zc3h12b	100	88.249	Oryzias_latipes_hni
ENSXCOG00000006151	zc3h12b	100	88.719	ENSORLG00015004818	zc3h12b	100	88.484	Oryzias_latipes_hsok
ENSXCOG00000006151	zc3h12b	60	72.436	ENSORLG00015020619	-	92	66.275	Oryzias_latipes_hsok
ENSXCOG00000006151	zc3h12b	65	68.555	ENSOMEG00000018642	-	72	72.274	Oryzias_melastigma
ENSXCOG00000006151	zc3h12b	100	89.189	ENSOMEG00000005768	zc3h12b	100	88.602	Oryzias_melastigma
ENSXCOG00000006151	zc3h12b	99	66.982	ENSOGAG00000029439	ZC3H12B	99	66.982	Otolemur_garnettii
ENSXCOG00000006151	zc3h12b	99	66.825	ENSOARG00000004959	ZC3H12B	99	66.825	Ovis_aries
ENSXCOG00000006151	zc3h12b	99	66.982	ENSPPAG00000039530	ZC3H12B	99	66.942	Pan_paniscus
ENSXCOG00000006151	zc3h12b	77	70.827	ENSPPRG00000004966	-	95	70.827	Panthera_pardus
ENSXCOG00000006151	zc3h12b	76	71.339	ENSPTIG00000005571	ZC3H12B	99	71.226	Panthera_tigris_altaica
ENSXCOG00000006151	zc3h12b	99	66.982	ENSPTRG00000021969	ZC3H12B	99	66.942	Pan_troglodytes
ENSXCOG00000006151	zc3h12b	99	67.101	ENSPANG00000007944	ZC3H12B	99	67.060	Papio_anubis
ENSXCOG00000006151	zc3h12b	93	75.220	ENSPKIG00000012946	zc3h12b	94	75.220	Paramormyrops_kingsleyae
ENSXCOG00000006151	zc3h12b	88	45.692	ENSPKIG00000012595	-	81	46.405	Paramormyrops_kingsleyae
ENSXCOG00000006151	zc3h12b	99	75.204	ENSPKIG00000019893	ZC3H12B	99	75.437	Paramormyrops_kingsleyae
ENSXCOG00000006151	zc3h12b	99	71.780	ENSPSIG00000016853	ZC3H12B	99	71.111	Pelodiscus_sinensis
ENSXCOG00000006151	zc3h12b	100	86.374	ENSPMGG00000006009	zc3h12b	100	86.374	Periophthalmus_magnuspinnatus
ENSXCOG00000006151	zc3h12b	99	65.614	ENSPCIG00000020264	ZC3H12B	99	65.340	Phascolarctos_cinereus
ENSXCOG00000006151	zc3h12b	100	97.415	ENSPFOG00000019365	zc3h12b	99	97.415	Poecilia_formosa
ENSXCOG00000006151	zc3h12b	99	96.934	ENSPLAG00000011981	zc3h12b	99	94.484	Poecilia_latipinna
ENSXCOG00000006151	zc3h12b	100	93.772	ENSPMEG00000002552	zc3h12b	99	93.772	Poecilia_mexicana
ENSXCOG00000006151	zc3h12b	100	96.945	ENSPREG00000020794	zc3h12b	99	96.945	Poecilia_reticulata
ENSXCOG00000006151	zc3h12b	99	62.954	ENSPPYG00000020416	ZC3H12B	92	66.273	Pongo_abelii
ENSXCOG00000006151	zc3h12b	98	60.434	ENSPCAG00000016422	ZC3H12B	94	62.788	Procavia_capensis
ENSXCOG00000006151	zc3h12b	99	67.730	ENSPCOG00000020467	ZC3H12B	99	67.376	Propithecus_coquereli
ENSXCOG00000006151	zc3h12b	91	65.723	ENSPVAG00000017352	ZC3H12B	93	65.723	Pteropus_vampyrus
ENSXCOG00000006151	zc3h12b	100	90.493	ENSPNYG00000018012	zc3h12b	100	89.789	Pundamilia_nyererei
ENSXCOG00000006151	zc3h12b	90	48.477	ENSPNAG00000017483	-	87	49.298	Pygocentrus_nattereri
ENSXCOG00000006151	zc3h12b	92	78.283	ENSPNAG00000002567	zc3h12b	92	78.436	Pygocentrus_nattereri
ENSXCOG00000006151	zc3h12b	99	65.998	ENSRNOG00000011508	Zc3h12b	99	65.416	Rattus_norvegicus
ENSXCOG00000006151	zc3h12b	99	67.101	ENSRBIG00000036402	ZC3H12B	99	67.060	Rhinopithecus_bieti
ENSXCOG00000006151	zc3h12b	99	66.982	ENSRROG00000036004	ZC3H12B	99	66.942	Rhinopithecus_roxellana
ENSXCOG00000006151	zc3h12b	99	66.941	ENSSBOG00000004095	ZC3H12B	99	66.706	Saimiri_boliviensis_boliviensis
ENSXCOG00000006151	zc3h12b	99	66.161	ENSSHAG00000006530	ZC3H12B	99	65.052	Sarcophilus_harrisii
ENSXCOG00000006151	zc3h12b	99	76.325	ENSSFOG00015008769	zc3h12b	99	77.294	Scleropages_formosus
ENSXCOG00000006151	zc3h12b	99	74.421	ENSSFOG00015012866	ZC3H12B	98	74.913	Scleropages_formosus
ENSXCOG00000006151	zc3h12b	100	90.164	ENSSMAG00000018309	zc3h12b	100	89.578	Scophthalmus_maximus
ENSXCOG00000006151	zc3h12b	100	92.115	ENSSDUG00000014078	zc3h12b	100	92.115	Seriola_dumerili
ENSXCOG00000006151	zc3h12b	100	91.549	ENSSLDG00000018895	zc3h12b	100	90.610	Seriola_lalandi_dorsalis
ENSXCOG00000006151	zc3h12b	91	53.614	ENSSARG00000002292	ZC3H12B	92	53.614	Sorex_araneus
ENSXCOG00000006151	zc3h12b	92	69.987	ENSSPUG00000014175	ZC3H12B	95	70.466	Sphenodon_punctatus
ENSXCOG00000006151	zc3h12b	100	91.422	ENSSPAG00000022460	zc3h12b	100	90.717	Stegastes_partitus
ENSXCOG00000006151	zc3h12b	99	67.101	ENSSSCG00000012367	ZC3H12B	99	67.101	Sus_scrofa
ENSXCOG00000006151	zc3h12b	99	71.226	ENSTGUG00000002846	ZC3H12B	99	70.588	Taeniopygia_guttata
ENSXCOG00000006151	zc3h12b	96	84.737	ENSTRUG00000012186	zc3h12b	99	85.714	Takifugu_rubripes
ENSXCOG00000006151	zc3h12b	91	90.393	ENSTNIG00000011828	zc3h12b	100	90.393	Tetraodon_nigroviridis
ENSXCOG00000006151	zc3h12b	93	60.614	ENSTBEG00000011540	ZC3H12B	93	63.165	Tupaia_belangeri
ENSXCOG00000006151	zc3h12b	80	80.000	ENSTTRG00000007468	ZC3H12B	76	80.000	Tursiops_truncatus
ENSXCOG00000006151	zc3h12b	99	65.917	ENSUAMG00000005098	ZC3H12B	99	65.917	Ursus_americanus
ENSXCOG00000006151	zc3h12b	99	65.917	ENSUMAG00000017054	ZC3H12B	99	65.917	Ursus_maritimus
ENSXCOG00000006151	zc3h12b	99	61.017	ENSVPAG00000009070	ZC3H12B	92	69.254	Vicugna_pacos
ENSXCOG00000006151	zc3h12b	99	66.154	ENSVVUG00000022686	ZC3H12B	99	66.154	Vulpes_vulpes
ENSXCOG00000006151	zc3h12b	100	65.698	ENSXETG00000017794	zc3h12b	99	65.222	Xenopus_tropicalis
ENSXCOG00000006151	zc3h12b	100	99.412	ENSXMAG00000018548	zc3h12b	99	99.412	Xiphophorus_maculatus