EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000006154 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 6279 bases
Position: chrKQ557202.1:16996134-17002412
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000008011	MMR_HSR1	PF01926.23	9.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000008109	-	450	-	ENSXCOP00000008011	149 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000006154's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000006154's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000006154	-	54	33.333	ENSXCOG00000002882	-	55	30.435
ENSXCOG00000006154	-	63	31.579	ENSXCOG00000016886	arl8a	53	31.579
ENSXCOG00000006154	-	62	33.696	ENSXCOG00000017380	arl5c	51	33.696
ENSXCOG00000006154	-	72	33.945	ENSXCOG00000003337	arl3l2	58	33.945
ENSXCOG00000006154	-	60	33.333	ENSXCOG00000013402	arl8ba	54	33.333
ENSXCOG00000006154	-	66	36.275	ENSXCOG00000015162	-	57	36.275
ENSXCOG00000006154	-	62	34.409	ENSXCOG00000001487	-	61	34.409
ENSXCOG00000006154	-	68	38.318	ENSXCOG00000007236	arl4aa	54	38.318
ENSXCOG00000006154	-	66	35.000	ENSXCOG00000004139	arf2b	55	35.000
ENSXCOG00000006154	-	64	34.737	ENSXCOG00000020384	-	53	34.737
ENSXCOG00000006154	-	66	36.364	ENSXCOG00000016687	-	54	36.364
ENSXCOG00000006154	-	63	31.579	ENSXCOG00000004543	arl8bb	64	31.579
ENSXCOG00000006154	-	72	31.776	ENSXCOG00000006377	arl2	58	31.776
ENSXCOG00000006154	-	62	34.409	ENSXCOG00000019704	arf3b	53	34.409

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000006154	-	81	84.167	ENSAPOG00000007186	sar1b	61	84.167	Acanthochromis_polyacanthus
ENSXCOG00000006154	-	79	91.453	ENSAPOG00000017891	-	88	93.043	Acanthochromis_polyacanthus
ENSXCOG00000006154	-	81	83.333	ENSACIG00000013634	sar1b	61	83.333	Amphilophus_citrinellus
ENSXCOG00000006154	-	79	90.598	ENSACIG00000024513	-	59	90.598	Amphilophus_citrinellus
ENSXCOG00000006154	-	79	91.453	ENSAOCG00000002627	-	88	93.043	Amphiprion_ocellaris
ENSXCOG00000006154	-	81	83.333	ENSAOCG00000005888	sar1b	61	83.333	Amphiprion_ocellaris
ENSXCOG00000006154	-	81	83.333	ENSAPEG00000022771	sar1b	61	83.333	Amphiprion_percula
ENSXCOG00000006154	-	77	93.860	ENSAPEG00000019680	-	86	93.860	Amphiprion_percula
ENSXCOG00000006154	-	79	91.453	ENSATEG00000023368	-	59	91.453	Anabas_testudineus
ENSXCOG00000006154	-	81	84.167	ENSATEG00000012904	sar1b	61	84.167	Anabas_testudineus
ENSXCOG00000006154	-	81	84.167	ENSACAG00000001470	-	61	84.167	Anolis_carolinensis
ENSXCOG00000006154	-	81	82.500	ENSACLG00000014649	sar1b	61	82.500	Astatotilapia_calliptera
ENSXCOG00000006154	-	79	90.598	ENSACLG00000005011	-	59	90.598	Astatotilapia_calliptera
ENSXCOG00000006154	-	77	89.565	ENSAMXG00000018108	sar1b	83	89.565	Astyanax_mexicanus
ENSXCOG00000006154	-	85	86.614	ENSAMXG00000034192	-	80	92.982	Astyanax_mexicanus
ENSXCOG00000006154	-	79	90.598	ENSCSEG00000016976	-	59	90.598	Cynoglossus_semilaevis
ENSXCOG00000006154	-	69	85.437	ENSCSEG00000015238	sar1b	51	85.437	Cynoglossus_semilaevis
ENSXCOG00000006154	-	81	86.667	ENSCVAG00000022959	sar1b	61	86.667	Cyprinodon_variegatus
ENSXCOG00000006154	-	81	86.667	ENSDARG00000103403	sar1b	61	86.667	Danio_rerio
ENSXCOG00000006154	-	79	69.492	FBgn0038947	Sar1	59	69.492	Drosophila_melanogaster
ENSXCOG00000006154	-	77	78.947	ENSEBUG00000011723	sar1b	58	78.947	Eptatretus_burgeri
ENSXCOG00000006154	-	81	87.500	ENSELUG00000020912	sar1b	61	87.500	Esox_lucius
ENSXCOG00000006154	-	81	86.667	ENSFHEG00000019865	sar1b	61	86.667	Fundulus_heteroclitus
ENSXCOG00000006154	-	81	85.833	ENSGMOG00000008023	sar1b	61	85.833	Gadus_morhua
ENSXCOG00000006154	-	81	83.333	ENSGAFG00000007081	sar1b	61	83.333	Gambusia_affinis
ENSXCOG00000006154	-	81	82.500	ENSGACG00000001474	sar1b	61	82.500	Gasterosteus_aculeatus
ENSXCOG00000006154	-	79	90.598	ENSHBUG00000018397	-	63	90.598	Haplochromis_burtoni
ENSXCOG00000006154	-	81	82.500	ENSHBUG00000000915	sar1b	61	82.500	Haplochromis_burtoni
ENSXCOG00000006154	-	81	84.167	ENSHCOG00000010953	sar1b	61	84.167	Hippocampus_comes
ENSXCOG00000006154	-	83	84.677	ENSIPUG00000010046	sar1b	87	84.677	Ictalurus_punctatus
ENSXCOG00000006154	-	81	85.000	ENSIPUG00000020925	sar1b	61	85.000	Ictalurus_punctatus
ENSXCOG00000006154	-	81	85.000	ENSKMAG00000019693	sar1b	61	85.000	Kryptolebias_marmoratus
ENSXCOG00000006154	-	82	88.800	ENSKMAG00000014875	-	96	88.800	Kryptolebias_marmoratus
ENSXCOG00000006154	-	79	89.744	ENSLBEG00000016945	-	59	89.744	Labrus_bergylta
ENSXCOG00000006154	-	81	81.667	ENSLBEG00000027550	sar1b	61	81.667	Labrus_bergylta
ENSXCOG00000006154	-	72	63.717	ENSLACG00000017029	-	57	63.717	Latimeria_chalumnae
ENSXCOG00000006154	-	81	78.333	ENSLACG00000010795	sar1b	61	78.333	Latimeria_chalumnae
ENSXCOG00000006154	-	79	87.179	ENSLOCG00000005214	-	59	87.179	Lepisosteus_oculatus
ENSXCOG00000006154	-	81	85.833	ENSLOCG00000010197	sar1b	61	85.833	Lepisosteus_oculatus
ENSXCOG00000006154	-	81	81.667	ENSMAMG00000021732	sar1b	61	81.667	Mastacembelus_armatus
ENSXCOG00000006154	-	81	82.500	ENSMZEG00005008942	sar1b	61	82.500	Maylandia_zebra
ENSXCOG00000006154	-	79	90.598	ENSMZEG00005001012	-	59	90.598	Maylandia_zebra
ENSXCOG00000006154	-	68	86.139	ENSMGAG00000005387	-	52	86.139	Meleagris_gallopavo
ENSXCOG00000006154	-	79	88.889	ENSMMOG00000013803	-	59	88.889	Mola_mola
ENSXCOG00000006154	-	81	83.333	ENSMALG00000016635	sar1b	56	83.333	Monopterus_albus
ENSXCOG00000006154	-	79	90.598	ENSNBRG00000014004	-	59	90.598	Neolamprologus_brichardi
ENSXCOG00000006154	-	81	82.500	ENSNBRG00000008013	sar1b	61	82.500	Neolamprologus_brichardi
ENSXCOG00000006154	-	81	83.333	ENSONIG00000017278	sar1b	61	83.333	Oreochromis_niloticus
ENSXCOG00000006154	-	81	85.833	ENSORLG00000000932	sar1b	61	85.833	Oryzias_latipes
ENSXCOG00000006154	-	81	85.833	ENSORLG00020021985	sar1b	61	85.833	Oryzias_latipes_hni
ENSXCOG00000006154	-	81	85.833	ENSORLG00015007044	sar1b	61	85.833	Oryzias_latipes_hsok
ENSXCOG00000006154	-	81	85.000	ENSOMEG00000001052	sar1b	72	91.262	Oryzias_melastigma
ENSXCOG00000006154	-	79	89.744	ENSPKIG00000017353	-	91	89.744	Paramormyrops_kingsleyae
ENSXCOG00000006154	-	81	85.000	ENSPKIG00000010688	sar1b	61	85.000	Paramormyrops_kingsleyae
ENSXCOG00000006154	-	81	83.471	ENSPMGG00000001234	sar1b	95	83.471	Periophthalmus_magnuspinnatus
ENSXCOG00000006154	-	79	76.667	ENSPMAG00000003593	sar1b	60	76.667	Petromyzon_marinus
ENSXCOG00000006154	-	81	82.500	ENSPFOG00000005666	sar1b	61	82.500	Poecilia_formosa
ENSXCOG00000006154	-	91	75.714	ENSPLAG00000012223	sar1b	100	75.714	Poecilia_latipinna
ENSXCOG00000006154	-	77	99.130	ENSPLAG00000001016	-	74	99.130	Poecilia_latipinna
ENSXCOG00000006154	-	84	80.000	ENSPMEG00000016831	sar1b	97	80.000	Poecilia_mexicana
ENSXCOG00000006154	-	93	85.507	ENSPREG00000002020	-	93	85.507	Poecilia_reticulata
ENSXCOG00000006154	-	81	82.500	ENSPREG00000005312	sar1b	55	82.500	Poecilia_reticulata
ENSXCOG00000006154	-	79	89.744	ENSPNYG00000021357	-	59	89.744	Pundamilia_nyererei
ENSXCOG00000006154	-	81	82.500	ENSPNYG00000012440	sar1b	61	82.500	Pundamilia_nyererei
ENSXCOG00000006154	-	81	86.667	ENSPNAG00000014683	sar1b	61	86.667	Pygocentrus_nattereri
ENSXCOG00000006154	-	85	85.827	ENSPNAG00000001123	-	64	85.827	Pygocentrus_nattereri
ENSXCOG00000006154	-	81	86.885	ENSSFOG00015020051	sar1b	84	86.885	Scleropages_formosus
ENSXCOG00000006154	-	81	87.500	ENSSFOG00015018128	-	61	87.500	Scleropages_formosus
ENSXCOG00000006154	-	79	90.598	ENSSMAG00000002165	-	59	90.598	Scophthalmus_maximus
ENSXCOG00000006154	-	92	81.752	ENSSDUG00000019629	-	96	81.752	Seriola_dumerili
ENSXCOG00000006154	-	81	85.000	ENSSDUG00000020926	sar1b	93	87.826	Seriola_dumerili
ENSXCOG00000006154	-	81	85.000	ENSSLDG00000017052	sar1b	94	89.815	Seriola_lalandi_dorsalis
ENSXCOG00000006154	-	79	91.453	ENSSLDG00000024197	-	59	91.453	Seriola_lalandi_dorsalis
ENSXCOG00000006154	-	81	83.333	ENSSPUG00000010247	-	61	83.333	Sphenodon_punctatus
ENSXCOG00000006154	-	81	85.833	ENSSPAG00000017634	sar1b	61	85.833	Stegastes_partitus
ENSXCOG00000006154	-	79	91.453	ENSSPAG00000015626	-	59	91.453	Stegastes_partitus
ENSXCOG00000006154	-	81	81.667	ENSTRUG00000023908	sar1b	61	81.667	Takifugu_rubripes
ENSXCOG00000006154	-	81	80.000	ENSTNIG00000016097	sar1b	61	80.000	Tetraodon_nigroviridis
ENSXCOG00000006154	-	89	77.444	ENSXMAG00000008294	sar1b	98	77.444	Xiphophorus_maculatus