EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000006156 (Gene tree)
Gene ID: -
Gene Symbol: rrp8
Alias: fk33d07|si:ch211-149e23.3|si:ch211-152b13.1|wu:fk33d07
Full Name: ribosomal RNA processing 8
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 3372 bases
Position: chrKQ557210.1:4130332-4133703
Accession: ZDB-GENE-030131-8898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000008015	Methyltransf_8	PF05148.15	1.3e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000008113	-	1143	-	ENSXCOP00000008015	380 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000006156's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000006156's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000006156	rrp8	65	56.627	ENSG00000132275	RRP8	77	62.963	Homo_sapiens
ENSXCOG00000006156	rrp8	100	61.869	ENSAPOG00000010806	rrp8	69	60.859	Acanthochromis_polyacanthus
ENSXCOG00000006156	rrp8	100	61.869	ENSAPOG00000008509	-	71	60.859	Acanthochromis_polyacanthus
ENSXCOG00000006156	rrp8	100	61.869	ENSAPOG00000010798	-	69	60.859	Acanthochromis_polyacanthus
ENSXCOG00000006156	rrp8	63	57.202	ENSAMEG00000016307	RRP8	54	56.225	Ailuropoda_melanoleuca
ENSXCOG00000006156	rrp8	100	61.942	ENSACIG00000019896	rrp8	80	61.942	Amphilophus_citrinellus
ENSXCOG00000006156	rrp8	100	62.217	ENSAOCG00000008785	rrp8	71	62.217	Amphiprion_ocellaris
ENSXCOG00000006156	rrp8	100	63.476	ENSAPEG00000008416	rrp8	71	63.476	Amphiprion_percula
ENSXCOG00000006156	rrp8	90	56.233	ENSATEG00000014110	rrp8	67	56.787	Anabas_testudineus
ENSXCOG00000006156	rrp8	64	57.143	ENSANAG00000028524	RRP8	77	62.037	Aotus_nancymaae
ENSXCOG00000006156	rrp8	100	60.622	ENSACLG00000002746	rrp8	70	60.622	Astatotilapia_calliptera
ENSXCOG00000006156	rrp8	100	50.127	ENSAMXG00000005164	rrp8	71	50.127	Astyanax_mexicanus
ENSXCOG00000006156	rrp8	68	54.198	ENSBTAG00000000697	RRP8	57	54.198	Bos_taurus
ENSXCOG00000006156	rrp8	60	44.783	WBGene00020296	T07A9.8	66	44.783	Caenorhabditis_elegans
ENSXCOG00000006156	rrp8	64	57.143	ENSCJAG00000014012	RRP8	77	62.037	Callithrix_jacchus
ENSXCOG00000006156	rrp8	65	56.225	ENSCAFG00020009685	RRP8	55	56.225	Canis_lupus_dingo
ENSXCOG00000006156	rrp8	61	58.298	ENSCHIG00000019002	RRP8	54	54.167	Capra_hircus
ENSXCOG00000006156	rrp8	68	53.788	ENSTSYG00000003391	RRP8	77	62.037	Carlito_syrichta
ENSXCOG00000006156	rrp8	62	52.966	ENSCAPG00000013284	RRP8	60	52.966	Cavia_aperea
ENSXCOG00000006156	rrp8	60	58.009	ENSCPOG00000012515	RRP8	51	58.009	Cavia_porcellus
ENSXCOG00000006156	rrp8	64	57.551	ENSCCAG00000035197	RRP8	76	61.682	Cebus_capucinus
ENSXCOG00000006156	rrp8	70	53.650	ENSCATG00000029344	RRP8	77	62.037	Cercocebus_atys
ENSXCOG00000006156	rrp8	64	56.735	ENSCLAG00000016099	RRP8	52	56.735	Chinchilla_lanigera
ENSXCOG00000006156	rrp8	64	57.143	ENSCSAG00000004345	RRP8	54	57.143	Chlorocebus_sabaeus
ENSXCOG00000006156	rrp8	59	59.471	ENSCSAVG00000006435	-	57	59.471	Ciona_savignyi
ENSXCOG00000006156	rrp8	68	54.167	ENSCANG00000040771	RRP8	77	61.111	Colobus_angolensis_palliatus
ENSXCOG00000006156	rrp8	61	58.190	ENSCGRG00001003103	Rrp8	51	58.190	Cricetulus_griseus_chok1gshd
ENSXCOG00000006156	rrp8	61	58.190	ENSCGRG00000014009	Rrp8	51	58.190	Cricetulus_griseus_crigri
ENSXCOG00000006156	rrp8	100	59.635	ENSCSEG00000007330	rrp8	100	59.635	Cynoglossus_semilaevis
ENSXCOG00000006156	rrp8	100	68.734	ENSCVAG00000012032	rrp8	71	68.734	Cyprinodon_variegatus
ENSXCOG00000006156	rrp8	100	49.614	ENSDARG00000071652	rrp8	80	71.171	Danio_rerio
ENSXCOG00000006156	rrp8	72	51.064	ENSDNOG00000000812	RRP8	56	51.064	Dasypus_novemcinctus
ENSXCOG00000006156	rrp8	64	56.735	ENSDORG00000000103	Rrp8	54	56.735	Dipodomys_ordii
ENSXCOG00000006156	rrp8	58	46.818	FBgn0034422	CG7137	82	38.689	Drosophila_melanogaster
ENSXCOG00000006156	rrp8	66	56.126	ENSETEG00000008877	RRP8	56	56.126	Echinops_telfairi
ENSXCOG00000006156	rrp8	61	57.983	ENSEASG00005001761	RRP8	77	62.037	Equus_asinus_asinus
ENSXCOG00000006156	rrp8	60	54.701	ENSFCAG00000015384	RRP8	77	62.037	Felis_catus
ENSXCOG00000006156	rrp8	60	72.687	ENSGMOG00000007188	rrp8	77	62.857	Gadus_morhua
ENSXCOG00000006156	rrp8	83	90.625	ENSGAFG00000012331	rrp8	71	90.625	Gambusia_affinis
ENSXCOG00000006156	rrp8	89	59.831	ENSGACG00000011343	rrp8	90	56.842	Gasterosteus_aculeatus
ENSXCOG00000006156	rrp8	65	56.627	ENSGGOG00000000389	RRP8	77	62.963	Gorilla_gorilla
ENSXCOG00000006156	rrp8	100	61.053	ENSHBUG00000017131	rrp8	70	61.053	Haplochromis_burtoni
ENSXCOG00000006156	rrp8	63	57.676	ENSHGLG00000003980	RRP8	54	57.676	Heterocephalus_glaber_female
ENSXCOG00000006156	rrp8	63	57.676	ENSHGLG00100015659	RRP8	54	57.676	Heterocephalus_glaber_male
ENSXCOG00000006156	rrp8	100	54.177	ENSHCOG00000001293	rrp8	70	53.885	Hippocampus_comes
ENSXCOG00000006156	rrp8	76	49.837	ENSSTOG00000016272	RRP8	67	49.837	Ictidomys_tridecemlineatus
ENSXCOG00000006156	rrp8	65	55.823	ENSJJAG00000020608	-	55	55.823	Jaculus_jaculus
ENSXCOG00000006156	rrp8	100	64.736	ENSKMAG00000009229	rrp8	71	64.736	Kryptolebias_marmoratus
ENSXCOG00000006156	rrp8	97	59.211	ENSLBEG00000019937	rrp8	100	59.126	Labrus_bergylta
ENSXCOG00000006156	rrp8	87	47.839	ENSLACG00000001252	-	70	55.515	Latimeria_chalumnae
ENSXCOG00000006156	rrp8	100	46.982	ENSLOCG00000009591	rrp8	70	46.982	Lepisosteus_oculatus
ENSXCOG00000006156	rrp8	81	42.765	ENSLOCG00000013776	-	90	48.718	Lepisosteus_oculatus
ENSXCOG00000006156	rrp8	60	58.874	ENSLAFG00000000112	RRP8	51	58.874	Loxodonta_africana
ENSXCOG00000006156	rrp8	64	57.551	ENSMFAG00000046084	RRP8	77	62.037	Macaca_fascicularis
ENSXCOG00000006156	rrp8	64	57.551	ENSMMUG00000007738	RRP8	77	62.037	Macaca_mulatta
ENSXCOG00000006156	rrp8	64	57.143	ENSMNEG00000029648	RRP8	77	62.037	Macaca_nemestrina
ENSXCOG00000006156	rrp8	70	53.650	ENSMLEG00000035110	RRP8	77	62.037	Mandrillus_leucophaeus
ENSXCOG00000006156	rrp8	100	60.050	ENSMAMG00000009679	rrp8	71	59.801	Mastacembelus_armatus
ENSXCOG00000006156	rrp8	100	60.982	ENSMZEG00005008926	rrp8	70	60.982	Maylandia_zebra
ENSXCOG00000006156	rrp8	60	58.009	ENSMAUG00000000324	Rrp8	50	58.009	Mesocricetus_auratus
ENSXCOG00000006156	rrp8	59	58.150	ENSMICG00000038472	RRP8	78	60.550	Microcebus_murinus
ENSXCOG00000006156	rrp8	65	55.422	ENSMOCG00000002486	Rrp8	55	55.422	Microtus_ochrogaster
ENSXCOG00000006156	rrp8	96	60.000	ENSMMOG00000015709	rrp8	74	60.417	Mola_mola
ENSXCOG00000006156	rrp8	100	61.084	ENSMALG00000015984	rrp8	71	60.396	Monopterus_albus
ENSXCOG00000006156	rrp8	65	55.823	MGP_CAROLIEiJ_G0030236	Rrp8	54	55.823	Mus_caroli
ENSXCOG00000006156	rrp8	61	59.052	ENSMUSG00000030888	Rrp8	51	59.052	Mus_musculus
ENSXCOG00000006156	rrp8	65	55.823	MGP_PahariEiJ_G0013451	Rrp8	55	55.823	Mus_pahari
ENSXCOG00000006156	rrp8	65	55.422	MGP_SPRETEiJ_G0031348	Rrp8	54	55.422	Mus_spretus
ENSXCOG00000006156	rrp8	65	56.225	ENSMPUG00000005510	RRP8	55	56.225	Mustela_putorius_furo
ENSXCOG00000006156	rrp8	61	57.983	ENSMLUG00000008938	RRP8	52	57.983	Myotis_lucifugus
ENSXCOG00000006156	rrp8	65	56.000	ENSNGAG00000012450	Rrp8	55	56.000	Nannospalax_galili
ENSXCOG00000006156	rrp8	100	59.008	ENSNBRG00000023416	rrp8	76	79.048	Neolamprologus_brichardi
ENSXCOG00000006156	rrp8	65	56.225	ENSNLEG00000017445	RRP8	55	56.225	Nomascus_leucogenys
ENSXCOG00000006156	rrp8	60	55.947	ENSMEUG00000004945	-	85	55.947	Notamacropus_eugenii
ENSXCOG00000006156	rrp8	61	58.369	ENSOPRG00000008052	RRP8	51	58.369	Ochotona_princeps
ENSXCOG00000006156	rrp8	60	59.307	ENSODEG00000011209	RRP8	51	59.307	Octodon_degus
ENSXCOG00000006156	rrp8	73	53.986	ENSONIG00000016861	rrp8	67	55.957	Oreochromis_niloticus
ENSXCOG00000006156	rrp8	65	57.028	ENSOCUG00000027619	RRP8	55	57.028	Oryctolagus_cuniculus
ENSXCOG00000006156	rrp8	100	57.935	ENSORLG00000004175	rrp8	71	57.935	Oryzias_latipes
ENSXCOG00000006156	rrp8	100	57.935	ENSORLG00020011413	rrp8	71	57.935	Oryzias_latipes_hni
ENSXCOG00000006156	rrp8	100	58.186	ENSORLG00015015410	rrp8	71	58.186	Oryzias_latipes_hsok
ENSXCOG00000006156	rrp8	100	57.000	ENSOMEG00000003161	rrp8	71	57.000	Oryzias_melastigma
ENSXCOG00000006156	rrp8	59	58.150	ENSOGAG00000007184	RRP8	50	58.150	Otolemur_garnettii
ENSXCOG00000006156	rrp8	65	56.627	ENSPPAG00000040792	RRP8	77	62.963	Pan_paniscus
ENSXCOG00000006156	rrp8	60	58.442	ENSPPRG00000022654	RRP8	77	62.037	Panthera_pardus
ENSXCOG00000006156	rrp8	60	58.442	ENSPTIG00000011321	RRP8	77	62.037	Panthera_tigris_altaica
ENSXCOG00000006156	rrp8	65	56.627	ENSPTRG00000003297	RRP8	77	62.963	Pan_troglodytes
ENSXCOG00000006156	rrp8	70	53.285	ENSPANG00000006537	RRP8	77	62.037	Papio_anubis
ENSXCOG00000006156	rrp8	65	55.020	ENSPEMG00000017257	Rrp8	55	55.020	Peromyscus_maniculatus_bairdii
ENSXCOG00000006156	rrp8	97	90.186	ENSPFOG00000007308	rrp8	70	90.155	Poecilia_formosa
ENSXCOG00000006156	rrp8	97	90.451	ENSPLAG00000011349	rrp8	70	90.415	Poecilia_latipinna
ENSXCOG00000006156	rrp8	100	90.181	ENSPMEG00000009888	rrp8	71	90.181	Poecilia_mexicana
ENSXCOG00000006156	rrp8	82	86.916	ENSPREG00000008450	rrp8	66	86.916	Poecilia_reticulata
ENSXCOG00000006156	rrp8	65	56.627	ENSPPYG00000003538	RRP8	54	56.627	Pongo_abelii
ENSXCOG00000006156	rrp8	62	59.916	ENSPCAG00000016176	RRP8	54	58.776	Procavia_capensis
ENSXCOG00000006156	rrp8	65	55.556	ENSPCOG00000024627	RRP8	77	62.037	Propithecus_coquereli
ENSXCOG00000006156	rrp8	72	51.590	ENSPVAG00000002420	RRP8	62	51.590	Pteropus_vampyrus
ENSXCOG00000006156	rrp8	100	60.733	ENSPNYG00000002878	rrp8	69	60.733	Pundamilia_nyererei
ENSXCOG00000006156	rrp8	65	55.200	ENSRNOG00000018766	Rrp8	100	60.000	Rattus_norvegicus
ENSXCOG00000006156	rrp8	68	54.167	ENSRBIG00000044485	RRP8	77	61.111	Rhinopithecus_bieti
ENSXCOG00000006156	rrp8	68	54.167	ENSRROG00000045322	RRP8	77	61.111	Rhinopithecus_roxellana
ENSXCOG00000006156	rrp8	51	38.865	YDR083W	-	58	38.865	Saccharomyces_cerevisiae
ENSXCOG00000006156	rrp8	64	57.143	ENSSBOG00000035280	RRP8	77	62.037	Saimiri_boliviensis_boliviensis
ENSXCOG00000006156	rrp8	70	52.768	ENSSHAG00000009273	-	55	52.768	Sarcophilus_harrisii
ENSXCOG00000006156	rrp8	100	50.365	ENSSFOG00015003917	rrp8	71	49.760	Scleropages_formosus
ENSXCOG00000006156	rrp8	100	62.371	ENSSMAG00000004859	rrp8	70	61.856	Scophthalmus_maximus
ENSXCOG00000006156	rrp8	100	61.443	ENSSDUG00000010477	rrp8	71	60.349	Seriola_dumerili
ENSXCOG00000006156	rrp8	100	61.347	ENSSLDG00000000521	rrp8	72	60.349	Seriola_lalandi_dorsalis
ENSXCOG00000006156	rrp8	76	51.333	ENSSARG00000007949	RRP8	65	51.333	Sorex_araneus
ENSXCOG00000006156	rrp8	97	64.083	ENSSPAG00000006664	rrp8	100	63.224	Stegastes_partitus
ENSXCOG00000006156	rrp8	61	58.824	ENSSSCG00000023880	RRP8	58	54.924	Sus_scrofa
ENSXCOG00000006156	rrp8	57	55.357	ENSTGUG00000000591	RRP8	100	55.357	Taeniopygia_guttata
ENSXCOG00000006156	rrp8	100	56.599	ENSTRUG00000021812	rrp8	72	56.599	Takifugu_rubripes
ENSXCOG00000006156	rrp8	65	55.422	ENSTBEG00000000237	RRP8	59	55.422	Tupaia_belangeri
ENSXCOG00000006156	rrp8	68	55.303	ENSTTRG00000004867	RRP8	60	54.745	Tursiops_truncatus
ENSXCOG00000006156	rrp8	65	56.225	ENSUAMG00000025756	RRP8	78	61.468	Ursus_americanus
ENSXCOG00000006156	rrp8	65	56.225	ENSUMAG00000000528	RRP8	52	56.225	Ursus_maritimus
ENSXCOG00000006156	rrp8	62	58.824	ENSVPAG00000008019	RRP8	53	58.130	Vicugna_pacos
ENSXCOG00000006156	rrp8	65	55.422	ENSVVUG00000024346	RRP8	56	55.422	Vulpes_vulpes
ENSXCOG00000006156	rrp8	100	98.158	ENSXMAG00000005011	rrp8	79	98.158	Xiphophorus_maculatus