EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000006281 (Gene tree)
Gene ID: -
Gene Symbol: gtpbp6
Alias: fc56b07|wu:fc56b07|wu:fl82e09
Full Name: GTP binding protein 6 (putative)
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 2547 bases
Position: chrKQ557224.1:4935309-4937855
Accession: ZDB-GENE-031118-62
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000008182	MMR_HSR1	PF01926.23	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000008280	-	1494	-	ENSXCOP00000008182	497 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000006281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000006281's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000006281	gtpbp6	57	68.198	ENSG00000178605	GTPBP6	55	68.198	Homo_sapiens
ENSXCOG00000006281	gtpbp6	76	76.845	ENSAPOG00000001396	gtpbp6	73	74.684	Acanthochromis_polyacanthus
ENSXCOG00000006281	gtpbp6	68	57.514	ENSAMEG00000001958	GTPBP6	73	57.514	Ailuropoda_melanoleuca
ENSXCOG00000006281	gtpbp6	76	76.982	ENSACIG00000001694	gtpbp6	73	76.982	Amphilophus_citrinellus
ENSXCOG00000006281	gtpbp6	76	76.962	ENSAOCG00000014817	gtpbp6	73	75.696	Amphiprion_ocellaris
ENSXCOG00000006281	gtpbp6	76	76.962	ENSAPEG00000017894	gtpbp6	73	75.696	Amphiprion_percula
ENSXCOG00000006281	gtpbp6	76	78.462	ENSATEG00000012768	gtpbp6	73	77.949	Anabas_testudineus
ENSXCOG00000006281	gtpbp6	53	71.483	ENSAPLG00000005592	GTPBP6	64	71.483	Anas_platyrhynchos
ENSXCOG00000006281	gtpbp6	59	71.918	ENSACAG00000011834	GTPBP6	54	73.929	Anolis_carolinensis
ENSXCOG00000006281	gtpbp6	76	76.982	ENSACLG00000002216	gtpbp6	73	76.982	Astatotilapia_calliptera
ENSXCOG00000006281	gtpbp6	68	77.745	ENSAMXG00000012493	gtpbp6	59	84.014	Astyanax_mexicanus
ENSXCOG00000006281	gtpbp6	57	62.544	ENSBTAG00000054315	GTPBP6	57	62.544	Bos_taurus
ENSXCOG00000006281	gtpbp6	57	64.664	ENSCAFG00000010931	GTPBP6	54	64.664	Canis_familiaris
ENSXCOG00000006281	gtpbp6	57	64.311	ENSCAFG00020010766	-	54	64.311	Canis_lupus_dingo
ENSXCOG00000006281	gtpbp6	57	64.311	ENSCAFG00020001279	-	54	64.311	Canis_lupus_dingo
ENSXCOG00000006281	gtpbp6	57	62.191	ENSCHIG00000000121	GTPBP6	55	62.191	Capra_hircus
ENSXCOG00000006281	gtpbp6	57	67.845	ENSCCAG00000032874	GTPBP6	55	67.845	Cebus_capucinus
ENSXCOG00000006281	gtpbp6	57	68.198	ENSCATG00000024945	GTPBP6	55	68.198	Cercocebus_atys
ENSXCOG00000006281	gtpbp6	52	65.637	ENSCLAG00000000054	-	87	65.637	Chinchilla_lanigera
ENSXCOG00000006281	gtpbp6	57	71.025	ENSCPBG00000007520	GTPBP6	54	71.025	Chrysemys_picta_bellii
ENSXCOG00000006281	gtpbp6	62	38.608	ENSCING00000012867	-	55	40.138	Ciona_intestinalis
ENSXCOG00000006281	gtpbp6	57	58.803	ENSCGRG00001022411	Gtpbp6	55	58.803	Cricetulus_griseus_chok1gshd
ENSXCOG00000006281	gtpbp6	54	59.191	ENSCGRG00000007715	Gtpbp6	62	59.191	Cricetulus_griseus_crigri
ENSXCOG00000006281	gtpbp6	72	68.975	ENSCSEG00000007271	gtpbp6	58	77.288	Cynoglossus_semilaevis
ENSXCOG00000006281	gtpbp6	76	84.392	ENSCVAG00000015417	gtpbp6	72	83.069	Cyprinodon_variegatus
ENSXCOG00000006281	gtpbp6	69	75.953	ENSDARG00000061091	gtpbp6	54	82.653	Danio_rerio
ENSXCOG00000006281	gtpbp6	57	50.877	ENSDNOG00000039508	GTPBP6	65	50.877	Dasypus_novemcinctus
ENSXCOG00000006281	gtpbp6	56	41.754	FBgn0039339	CG5116	52	41.754	Drosophila_melanogaster
ENSXCOG00000006281	gtpbp6	67	49.112	ENSEBUG00000000404	gtpbp6	53	53.957	Eptatretus_burgeri
ENSXCOG00000006281	gtpbp6	57	66.431	ENSECAG00000032734	GTPBP6	58	66.431	Equus_caballus
ENSXCOG00000006281	gtpbp6	60	83.108	ENSELUG00000016376	gtpbp6	53	83.333	Esox_lucius
ENSXCOG00000006281	gtpbp6	57	58.304	ENSFCAG00000010310	-	54	58.304	Felis_catus
ENSXCOG00000006281	gtpbp6	57	56.491	ENSFCAG00000013263	-	54	55.088	Felis_catus
ENSXCOG00000006281	gtpbp6	58	69.550	ENSFALG00000004133	GTPBP6	61	69.550	Ficedula_albicollis
ENSXCOG00000006281	gtpbp6	99	70.816	ENSFHEG00000012018	gtpbp6	91	69.184	Fundulus_heteroclitus
ENSXCOG00000006281	gtpbp6	52	83.908	ENSGMOG00000004778	gtpbp6	64	83.908	Gadus_morhua
ENSXCOG00000006281	gtpbp6	52	72.266	ENSGALG00000016717	GTPBP6	64	72.266	Gallus_gallus
ENSXCOG00000006281	gtpbp6	76	96.286	ENSGAFG00000018158	gtpbp6	66	96.286	Gambusia_affinis
ENSXCOG00000006281	gtpbp6	71	67.978	ENSGACG00000013857	gtpbp6	83	67.978	Gasterosteus_aculeatus
ENSXCOG00000006281	gtpbp6	57	71.731	ENSGAGG00000021606	GTPBP6	54	71.731	Gopherus_agassizii
ENSXCOG00000006281	gtpbp6	76	76.982	ENSHBUG00000013113	gtpbp6	73	76.982	Haplochromis_burtoni
ENSXCOG00000006281	gtpbp6	57	64.311	ENSHGLG00000000207	GTPBP6	55	64.311	Heterocephalus_glaber_female
ENSXCOG00000006281	gtpbp6	52	62.934	ENSHGLG00100000320	GTPBP6	72	62.934	Heterocephalus_glaber_male
ENSXCOG00000006281	gtpbp6	72	56.846	ENSHCOG00000012544	gtpbp6	71	56.846	Hippocampus_comes
ENSXCOG00000006281	gtpbp6	59	83.729	ENSIPUG00000022531	gtpbp6	54	83.673	Ictalurus_punctatus
ENSXCOG00000006281	gtpbp6	76	78.851	ENSKMAG00000016464	gtpbp6	73	78.851	Kryptolebias_marmoratus
ENSXCOG00000006281	gtpbp6	91	66.667	ENSLBEG00000024203	gtpbp6	84	65.875	Labrus_bergylta
ENSXCOG00000006281	gtpbp6	61	75.748	ENSLACG00000012754	GTPBP6	53	75.850	Latimeria_chalumnae
ENSXCOG00000006281	gtpbp6	68	72.059	ENSLOCG00000008009	gtpbp6	62	77.365	Lepisosteus_oculatus
ENSXCOG00000006281	gtpbp6	57	68.198	ENSMFAG00000041568	GTPBP6	55	68.198	Macaca_fascicularis
ENSXCOG00000006281	gtpbp6	57	53.004	ENSMNEG00000039609	GTPBP6	52	53.004	Macaca_nemestrina
ENSXCOG00000006281	gtpbp6	76	77.261	ENSMAMG00000012631	gtpbp6	73	77.261	Mastacembelus_armatus
ENSXCOG00000006281	gtpbp6	76	76.726	ENSMZEG00005002869	gtpbp6	73	76.726	Maylandia_zebra
ENSXCOG00000006281	gtpbp6	53	71.483	ENSMGAG00000014752	GTPBP6	65	71.483	Meleagris_gallopavo
ENSXCOG00000006281	gtpbp6	97	62.397	ENSMMOG00000005950	gtpbp6	72	68.262	Mola_mola
ENSXCOG00000006281	gtpbp6	57	68.310	ENSMODG00000000326	GTPBP6	60	68.310	Monodelphis_domestica
ENSXCOG00000006281	gtpbp6	76	73.282	ENSMALG00000014993	gtpbp6	55	87.075	Monopterus_albus
ENSXCOG00000006281	gtpbp6	57	56.940	MGP_CAROLIEiJ_G0027536	Gtpbp6	55	56.940	Mus_caroli
ENSXCOG00000006281	gtpbp6	57	58.363	ENSMUSG00000033434	Gtpbp6	55	58.363	Mus_musculus
ENSXCOG00000006281	gtpbp6	57	58.363	MGP_SPRETEiJ_G0028534	Gtpbp6	55	58.363	Mus_spretus
ENSXCOG00000006281	gtpbp6	57	62.057	ENSMPUG00000001536	GTPBP6	58	62.057	Mustela_putorius_furo
ENSXCOG00000006281	gtpbp6	57	61.268	ENSNGAG00000011609	Gtpbp6	55	61.268	Nannospalax_galili
ENSXCOG00000006281	gtpbp6	76	78.261	ENSNBRG00000017629	gtpbp6	73	78.261	Neolamprologus_brichardi
ENSXCOG00000006281	gtpbp6	57	67.958	ENSMEUG00000001355	-	76	67.958	Notamacropus_eugenii
ENSXCOG00000006281	gtpbp6	56	60.145	ENSODEG00000001052	GTPBP6	54	60.145	Octodon_degus
ENSXCOG00000006281	gtpbp6	74	79.003	ENSONIG00000007330	gtpbp6	72	79.003	Oreochromis_niloticus
ENSXCOG00000006281	gtpbp6	64	58.438	ENSOANG00000007007	-	63	61.301	Ornithorhynchus_anatinus
ENSXCOG00000006281	gtpbp6	74	54.787	ENSOCUG00000008245	GTPBP6	55	62.191	Oryctolagus_cuniculus
ENSXCOG00000006281	gtpbp6	76	78.158	ENSORLG00000016077	gtpbp6	72	78.158	Oryzias_latipes
ENSXCOG00000006281	gtpbp6	76	78.534	ENSORLG00020018687	gtpbp6	72	78.534	Oryzias_latipes_hni
ENSXCOG00000006281	gtpbp6	76	78.534	ENSORLG00015014255	gtpbp6	72	78.534	Oryzias_latipes_hsok
ENSXCOG00000006281	gtpbp6	76	78.571	ENSOMEG00000004496	gtpbp6	71	78.571	Oryzias_melastigma
ENSXCOG00000006281	gtpbp6	57	67.138	ENSOGAG00000011327	GTPBP6	63	67.138	Otolemur_garnettii
ENSXCOG00000006281	gtpbp6	52	59.023	ENSOARG00000000946	GTPBP6	64	59.023	Ovis_aries
ENSXCOG00000006281	gtpbp6	52	69.498	ENSPPAG00000028400	-	57	69.498	Pan_paniscus
ENSXCOG00000006281	gtpbp6	57	57.143	ENSPPRG00000006710	-	56	57.143	Panthera_pardus
ENSXCOG00000006281	gtpbp6	57	56.794	ENSPPRG00000004932	-	55	56.794	Panthera_pardus
ENSXCOG00000006281	gtpbp6	57	68.551	ENSPTRG00000050696	GTPBP6	55	68.551	Pan_troglodytes
ENSXCOG00000006281	gtpbp6	57	63.604	ENSPANG00000011580	GTPBP6	55	63.604	Papio_anubis
ENSXCOG00000006281	gtpbp6	79	66.420	ENSPKIG00000022514	gtpbp6	64	69.697	Paramormyrops_kingsleyae
ENSXCOG00000006281	gtpbp6	53	72.901	ENSPSIG00000013117	GTPBP6	65	72.901	Pelodiscus_sinensis
ENSXCOG00000006281	gtpbp6	52	56.538	ENSPMAG00000006496	gtpbp6	65	56.538	Petromyzon_marinus
ENSXCOG00000006281	gtpbp6	57	69.014	ENSPCIG00000016456	GTPBP6	55	69.014	Phascolarctos_cinereus
ENSXCOG00000006281	gtpbp6	78	94.845	ENSPFOG00000015695	gtpbp6	97	92.784	Poecilia_formosa
ENSXCOG00000006281	gtpbp6	76	94.695	ENSPLAG00000015495	gtpbp6	73	92.573	Poecilia_latipinna
ENSXCOG00000006281	gtpbp6	76	93.122	ENSPMEG00000000859	gtpbp6	73	95.238	Poecilia_mexicana
ENSXCOG00000006281	gtpbp6	76	96.552	ENSPREG00000017643	gtpbp6	73	96.552	Poecilia_reticulata
ENSXCOG00000006281	gtpbp6	76	77.238	ENSPNYG00000000521	gtpbp6	72	77.238	Pundamilia_nyererei
ENSXCOG00000006281	gtpbp6	68	75.444	ENSPNAG00000002094	gtpbp6	53	81.633	Pygocentrus_nattereri
ENSXCOG00000006281	gtpbp6	57	59.075	ENSRNOG00000048168	Gtpbp6	57	57.931	Rattus_norvegicus
ENSXCOG00000006281	gtpbp6	57	59.075	ENSRNOG00000037426	Gtpbp6	57	57.931	Rattus_norvegicus
ENSXCOG00000006281	gtpbp6	57	68.551	ENSRBIG00000027538	GTPBP6	55	68.551	Rhinopithecus_bieti
ENSXCOG00000006281	gtpbp6	57	67.845	ENSRROG00000033503	GTPBP6	55	67.845	Rhinopithecus_roxellana
ENSXCOG00000006281	gtpbp6	57	70.423	ENSSHAG00000015570	GTPBP6	55	70.423	Sarcophilus_harrisii
ENSXCOG00000006281	gtpbp6	62	79.935	ENSSFOG00015004098	gtpbp6	52	80.546	Scleropages_formosus
ENSXCOG00000006281	gtpbp6	76	75.190	ENSSMAG00000019520	gtpbp6	84	65.096	Scophthalmus_maximus
ENSXCOG00000006281	gtpbp6	76	73.250	ENSSDUG00000002202	gtpbp6	74	72.250	Seriola_dumerili
ENSXCOG00000006281	gtpbp6	67	79.941	ENSSLDG00000023633	gtpbp6	61	85.714	Seriola_lalandi_dorsalis
ENSXCOG00000006281	gtpbp6	57	69.611	ENSSPUG00000005537	GTPBP6	55	69.611	Sphenodon_punctatus
ENSXCOG00000006281	gtpbp6	76	77.136	ENSSPAG00000017406	gtpbp6	74	77.136	Stegastes_partitus
ENSXCOG00000006281	gtpbp6	57	66.431	ENSSSCG00000037491	-	55	66.431	Sus_scrofa
ENSXCOG00000006281	gtpbp6	57	66.431	ENSSSCG00000033858	-	66	66.431	Sus_scrofa
ENSXCOG00000006281	gtpbp6	58	69.204	ENSTGUG00000010642	-	64	69.204	Taeniopygia_guttata
ENSXCOG00000006281	gtpbp6	76	74.142	ENSTRUG00000011175	gtpbp6	89	61.491	Takifugu_rubripes
ENSXCOG00000006281	gtpbp6	61	83.775	ENSTNIG00000010659	gtpbp6	66	84.068	Tetraodon_nigroviridis
ENSXCOG00000006281	gtpbp6	65	58.631	ENSUMAG00000018848	GTPBP6	81	58.631	Ursus_maritimus
ENSXCOG00000006281	gtpbp6	63	59.062	ENSVVUG00000008199	GTPBP6	50	59.062	Vulpes_vulpes
ENSXCOG00000006281	gtpbp6	58	70.833	ENSXETG00000004125	gtpbp6	54	70.833	Xenopus_tropicalis
ENSXCOG00000006281	gtpbp6	76	98.939	ENSXMAG00000015980	gtpbp6	73	98.939	Xiphophorus_maculatus