EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000006303 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
39018 bases
Position
chrKQ557202.1:18121382-18160399
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000008206zf-metPF12874.72.1e-2714
ENSXCOP00000008206zf-metPF12874.72.1e-2724
ENSXCOP00000008206zf-metPF12874.72.1e-2734
ENSXCOP00000008206zf-metPF12874.72.1e-2744
ENSXCOP00000008211zf-metPF12874.72.7e-1913
ENSXCOP00000008211zf-metPF12874.72.7e-1923
ENSXCOP00000008211zf-metPF12874.72.7e-1933
ENSXCOP00000008206zf-C2H2_jazPF12171.86.7e-1511
ENSXCOP00000008211zf-C2H2_jazPF12171.89.1e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000008309-1185-ENSXCOP00000008211394 (aa)--
ENSXCOT00000008304-1365-ENSXCOP00000008206454 (aa)--
Gene Model
Click here to download ENSXCOG00000006303's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000006303's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000006303-8037.117ENSXCOG00000001430znf385a9737.463
ENSXCOG00000006303-9136.641ENSXCOG00000019652-8938.770
ENSXCOG00000006303-7733.439ENSXCOG00000020124ZNF385D9934.756
ENSXCOG00000006303-9639.646ENSXCOG00000007312znf385d9438.000
ENSXCOG00000006303-8037.666ENSXCOG00000018547-8637.135
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000006303-10044.292ENSG00000187595ZNF385C10044.470Homo_sapiens
ENSXCOG00000006303-9869.246ENSAPOG00000020331-9969.710Acanthochromis_polyacanthus
ENSXCOG00000006303-9947.444ENSAPOG00000015797znf385c9948.333Acanthochromis_polyacanthus
ENSXCOG00000006303-9753.176ENSACIG00000010548znf385c9954.412Amphilophus_citrinellus
ENSXCOG00000006303-9973.153ENSACIG00000009214-9875.248Amphilophus_citrinellus
ENSXCOG00000006303-8648.762ENSAOCG00000012241znf385c10049.751Amphiprion_ocellaris
ENSXCOG00000006303-9868.421ENSAOCG00000023140-9969.401Amphiprion_ocellaris
ENSXCOG00000006303-9951.101ENSAPEG00000004794znf385c9948.745Amphiprion_percula
ENSXCOG00000006303-9873.846ENSAPEG00000015578-9873.846Amphiprion_percula
ENSXCOG00000006303-9949.032ENSATEG00000001826znf385c9050.677Anabas_testudineus
ENSXCOG00000006303-10065.865ENSATEG00000022343-10065.865Anabas_testudineus
ENSXCOG00000006303-9748.241ENSAPLG00000002883ZNF385C9848.878Anas_platyrhynchos
ENSXCOG00000006303-9745.253ENSACAG00000016919ZNF385C9444.646Anolis_carolinensis
ENSXCOG00000006303-10043.418ENSANAG00000036481ZNF385C10044.828Aotus_nancymaae
ENSXCOG00000006303-9949.891ENSACLG00000002560znf385c9948.447Astatotilapia_calliptera
ENSXCOG00000006303-9968.039ENSACLG00000008631-9967.550Astatotilapia_calliptera
ENSXCOG00000006303-9748.148ENSAMXG00000000412znf385c9846.725Astyanax_mexicanus
ENSXCOG00000006303-9947.898ENSAMXG00000021355-9947.689Astyanax_mexicanus
ENSXCOG00000006303-9743.705ENSBTAG00000046162ZNF385C9444.196Bos_taurus
ENSXCOG00000006303-10043.119ENSCJAG00000047842ZNF385C10044.368Callithrix_jacchus
ENSXCOG00000006303-9742.824ENSCAFG00000015731ZNF385C9444.242Canis_familiaris
ENSXCOG00000006303-9742.689ENSCAFG00020013967ZNF385C9944.340Canis_lupus_dingo
ENSXCOG00000006303-9743.437ENSCHIG00000013858ZNF385C9843.885Capra_hircus
ENSXCOG00000006303-9543.004ENSTSYG00000010579ZNF385C9445.436Carlito_syrichta
ENSXCOG00000006303-9243.829ENSCAPG00000011124ZNF385C9844.019Cavia_aperea
ENSXCOG00000006303-9243.829ENSCPOG00000006417ZNF385C9844.019Cavia_porcellus
ENSXCOG00000006303-10043.953ENSCCAG00000030786ZNF385C10044.907Cebus_capucinus
ENSXCOG00000006303-10044.419ENSCATG00000044775ZNF385C10044.545Cercocebus_atys
ENSXCOG00000006303-9242.680ENSCLAG00000015100ZNF385C9843.155Chinchilla_lanigera
ENSXCOG00000006303-9746.028ENSCSAG00000003074ZNF385C9744.884Chlorocebus_sabaeus
ENSXCOG00000006303-9946.575ENSCPBG00000006782ZNF385C9945.455Chrysemys_picta_bellii
ENSXCOG00000006303-10044.700ENSCANG00000018141ZNF385C10044.700Colobus_angolensis_palliatus
ENSXCOG00000006303-9744.811ENSCGRG00001021185Zfp385c9746.009Cricetulus_griseus_chok1gshd
ENSXCOG00000006303-9744.811ENSCGRG00000008226Zfp385c9746.009Cricetulus_griseus_crigri
ENSXCOG00000006303-9746.473ENSCSEG00000021383znf385c9842.029Cynoglossus_semilaevis
ENSXCOG00000006303-9761.502ENSCSEG00000007490-9962.474Cynoglossus_semilaevis
ENSXCOG00000006303-9975.490ENSCVAG00000003335-9974.777Cyprinodon_variegatus
ENSXCOG00000006303-9969.444ENSCVAG00000009496znf385c7669.444Cyprinodon_variegatus
ENSXCOG00000006303-9746.507ENSDARG00000058154znf385c10045.794Danio_rerio
ENSXCOG00000006303-6459.091ENSDNOG00000008734-5547.368Dasypus_novemcinctus
ENSXCOG00000006303-9744.471ENSDORG00000001917Zfp385c9945.154Dipodomys_ordii
ENSXCOG00000006303-10043.508ENSEASG00005009102ZNF385C10044.186Equus_asinus_asinus
ENSXCOG00000006303-10041.781ENSECAG00000016402ZNF385C10043.981Equus_caballus
ENSXCOG00000006303-9954.926ENSELUG00000018401znf385c9853.253Esox_lucius
ENSXCOG00000006303-9851.526ENSELUG00000010408-7863.694Esox_lucius
ENSXCOG00000006303-9744.125ENSFCAG00000002143ZNF385C9444.764Felis_catus
ENSXCOG00000006303-9947.706ENSFALG00000000647ZNF385C9447.629Ficedula_albicollis
ENSXCOG00000006303-9238.481ENSFDAG00000017941ZNF385C9840.695Fukomys_damarensis
ENSXCOG00000006303-5287.324ENSFHEG00000010106-8657.418Fundulus_heteroclitus
ENSXCOG00000006303-7563.415ENSFHEG00000012220znf385c7057.377Fundulus_heteroclitus
ENSXCOG00000006303-5467.130ENSGMOG00000000733-9669.118Gadus_morhua
ENSXCOG00000006303-9745.060ENSGMOG00000011879znf385c9944.231Gadus_morhua
ENSXCOG00000006303-8645.550ENSGALG00000003403ZNF385C9245.789Gallus_gallus
ENSXCOG00000006303-9949.041ENSGAFG00000001005znf385c7076.984Gambusia_affinis
ENSXCOG00000006303-9883.068ENSGAFG00000003621-9584.118Gambusia_affinis
ENSXCOG00000006303-9751.765ENSGACG00000008756znf385c9852.000Gasterosteus_aculeatus
ENSXCOG00000006303-5474.408ENSGACG00000006211-9775.248Gasterosteus_aculeatus
ENSXCOG00000006303-9948.157ENSGAGG00000023263ZNF385C9944.543Gopherus_agassizii
ENSXCOG00000006303-10045.147ENSGGOG00000013170ZNF385C9944.749Gorilla_gorilla
ENSXCOG00000006303-9967.843ENSHBUG00000003996-9967.329Haplochromis_burtoni
ENSXCOG00000006303-9949.891ENSHBUG00000001935znf385c9948.447Haplochromis_burtoni
ENSXCOG00000006303-9241.206ENSHGLG00000013481ZNF385C9842.623Heterocephalus_glaber_female
ENSXCOG00000006303-8740.470ENSHGLG00100011307ZNF385C9341.772Heterocephalus_glaber_male
ENSXCOG00000006303-9858.765ENSHCOG00000020248-9458.268Hippocampus_comes
ENSXCOG00000006303-9553.457ENSHCOG00000004896znf385c9552.699Hippocampus_comes
ENSXCOG00000006303-6738.217ENSIPUG00000021578-6947.783Ictalurus_punctatus
ENSXCOG00000006303-9948.268ENSIPUG00000017483znf385c9248.235Ictalurus_punctatus
ENSXCOG00000006303-9745.606ENSSTOG00000020287ZNF385C9945.047Ictidomys_tridecemlineatus
ENSXCOG00000006303-9745.411ENSJJAG00000020892Zfp385c9745.952Jaculus_jaculus
ENSXCOG00000006303-9974.793ENSKMAG00000017463-9985.149Kryptolebias_marmoratus
ENSXCOG00000006303-9947.521ENSKMAG00000020120znf385c9948.117Kryptolebias_marmoratus
ENSXCOG00000006303-9277.236ENSLBEG00000004271znf385c6777.869Labrus_bergylta
ENSXCOG00000006303-8978.155ENSLBEG00000021407-9441.865Labrus_bergylta
ENSXCOG00000006303-9947.188ENSLACG00000005345ZNF385C6847.847Latimeria_chalumnae
ENSXCOG00000006303-9946.025ENSLOCG00000012589znf385c9546.415Lepisosteus_oculatus
ENSXCOG00000006303-9845.750ENSLAFG00000013959ZNF385C10044.877Loxodonta_africana
ENSXCOG00000006303-10044.419ENSMFAG00000044338ZNF385C10044.545Macaca_fascicularis
ENSXCOG00000006303-10044.419ENSMMUG00000003894ZNF385C10044.545Macaca_mulatta
ENSXCOG00000006303-10044.419ENSMNEG00000045282ZNF385C10044.545Macaca_nemestrina
ENSXCOG00000006303-10044.419ENSMLEG00000039465ZNF385C10044.545Mandrillus_leucophaeus
ENSXCOG00000006303-9949.351ENSMAMG00000022312znf385c7975.397Mastacembelus_armatus
ENSXCOG00000006303-9967.059ENSMAMG00000016188-9245.810Mastacembelus_armatus
ENSXCOG00000006303-9968.039ENSMZEG00005021094-9967.550Maylandia_zebra
ENSXCOG00000006303-9949.891ENSMZEG00005022745znf385c9948.447Maylandia_zebra
ENSXCOG00000006303-6643.841ENSMGAG00000003221-7943.116Meleagris_gallopavo
ENSXCOG00000006303-10042.922ENSMAUG00000020342Zfp385c9944.394Mesocricetus_auratus
ENSXCOG00000006303-10044.725ENSMICG00000015236ZNF385C10045.183Microcebus_murinus
ENSXCOG00000006303-9745.047ENSMOCG00000006378Zfp385c9844.208Microtus_ochrogaster
ENSXCOG00000006303-9955.072ENSMMOG00000020703znf385c9855.443Mola_mola
ENSXCOG00000006303-9964.303ENSMMOG00000013984-9765.261Mola_mola
ENSXCOG00000006303-9843.418ENSMODG00000014774ZNF385C9946.437Monodelphis_domestica
ENSXCOG00000006303-9772.152ENSMALG00000022342-9873.434Monopterus_albus
ENSXCOG00000006303-9950.658ENSMALG00000006626znf385c9949.689Monopterus_albus
ENSXCOG00000006303-9743.991MGP_CAROLIEiJ_G0017180Zfp385c9744.262Mus_caroli
ENSXCOG00000006303-9843.820ENSMUSG00000014198Zfp385c9943.764Mus_musculus
ENSXCOG00000006303-9744.262MGP_PahariEiJ_G0018310Zfp385c9745.626Mus_pahari
ENSXCOG00000006303-9744.689MGP_SPRETEiJ_G0018023Zfp385c8061.538Mus_spretus
ENSXCOG00000006303-5969.159ENSMPUG00000010573ZNF385C9444.332Mustela_putorius_furo
ENSXCOG00000006303-9744.601ENSMLUG00000011983ZNF385C9444.289Myotis_lucifugus
ENSXCOG00000006303-10045.266ENSNGAG00000009495Zfp385c9946.154Nannospalax_galili
ENSXCOG00000006303-8665.659ENSNBRG00000016947-10066.298Neolamprologus_brichardi
ENSXCOG00000006303-8752.893ENSNBRG00000018835znf385c10053.168Neolamprologus_brichardi
ENSXCOG00000006303-9742.657ENSNLEG00000011345-9942.657Nomascus_leucogenys
ENSXCOG00000006303-8642.162ENSMEUG00000016616ZNF385C10044.236Notamacropus_eugenii
ENSXCOG00000006303-8639.221ENSOPRG00000008120ZNF385C8840.674Ochotona_princeps
ENSXCOG00000006303-9241.176ENSODEG00000018049ZNF385C7268.224Octodon_degus
ENSXCOG00000006303-9970.672ENSONIG00000016281-9770.423Oreochromis_niloticus
ENSXCOG00000006303-9951.835ENSONIG00000001083znf385c9952.315Oreochromis_niloticus
ENSXCOG00000006303-6142.045ENSOANG00000004705-8841.697Ornithorhynchus_anatinus
ENSXCOG00000006303-9744.787ENSOCUG00000013271ZNF385C9444.466Oryctolagus_cuniculus
ENSXCOG00000006303-9950.435ENSORLG00000003810znf385c9164.024Oryzias_latipes
ENSXCOG00000006303-9963.762ENSORLG00000029969-9262.868Oryzias_latipes
ENSXCOG00000006303-9749.565ENSORLG00020008564znf385c9948.913Oryzias_latipes_hni
ENSXCOG00000006303-9963.189ENSORLG00020020411-9261.765Oryzias_latipes_hni
ENSXCOG00000006303-9947.639ENSORLG00015022036znf385c7563.415Oryzias_latipes_hsok
ENSXCOG00000006303-9962.795ENSORLG00015000506-9961.573Oryzias_latipes_hsok
ENSXCOG00000006303-9963.800ENSOMEG00000004855ZNF385C9963.279Oryzias_melastigma
ENSXCOG00000006303-9950.370ENSOMEG00000022981znf385c9949.136Oryzias_melastigma
ENSXCOG00000006303-9744.289ENSOGAG00000017196ZNF385C9444.848Otolemur_garnettii
ENSXCOG00000006303-5345.370ENSOARG00000018292ZNF385C9443.725Ovis_aries
ENSXCOG00000006303-9540.564ENSPPAG00000042977ZNF385C10042.932Pan_paniscus
ENSXCOG00000006303-9744.125ENSPPRG00000004788ZNF385C9444.969Panthera_pardus
ENSXCOG00000006303-10043.578ENSPTIG00000007806ZNF385C10044.191Panthera_tigris_altaica
ENSXCOG00000006303-10044.495ENSPTRG00000009190ZNF385C10045.183Pan_troglodytes
ENSXCOG00000006303-10044.875ENSPANG00000021483ZNF385C10044.545Papio_anubis
ENSXCOG00000006303-9849.159ENSPKIG00000001346ZNF385C9850.318Paramormyrops_kingsleyae
ENSXCOG00000006303-9747.776ENSPKIG00000020227znf385c9848.578Paramormyrops_kingsleyae
ENSXCOG00000006303-9648.411ENSPSIG00000007592ZNF385C9647.922Pelodiscus_sinensis
ENSXCOG00000006303-9772.280ENSPMGG00000019158ZNF385C9871.429Periophthalmus_magnuspinnatus
ENSXCOG00000006303-9742.056ENSPEMG00000018609Zfp385c9845.221Peromyscus_maniculatus_bairdii
ENSXCOG00000006303-8638.421ENSPMAG00000000983znf385c10038.684Petromyzon_marinus
ENSXCOG00000006303-9843.914ENSPCIG00000020238ZNF385C9846.905Phascolarctos_cinereus
ENSXCOG00000006303-9979.007ENSPFOG00000005958-9980.272Poecilia_formosa
ENSXCOG00000006303-9952.392ENSPFOG00000011713znf385c9952.518Poecilia_formosa
ENSXCOG00000006303-9946.951ENSPLAG00000021677znf385c9946.926Poecilia_latipinna
ENSXCOG00000006303-9780.230ENSPLAG00000016301-9580.915Poecilia_latipinna
ENSXCOG00000006303-9879.141ENSPMEG00000012593-9580.716Poecilia_mexicana
ENSXCOG00000006303-9946.748ENSPMEG00000011416znf385c7568.707Poecilia_mexicana
ENSXCOG00000006303-9177.419ENSPREG00000010489znf385c6669.061Poecilia_reticulata
ENSXCOG00000006303-9872.281ENSPREG00000022214-9672.025Poecilia_reticulata
ENSXCOG00000006303-9744.681ENSPPYG00000008400ZNF385C9745.390Pongo_abelii
ENSXCOG00000006303-6783.333ENSPCAG00000015851ZNF385C6683.333Procavia_capensis
ENSXCOG00000006303-9744.125ENSPCOG00000023229ZNF385C9444.490Propithecus_coquereli
ENSXCOG00000006303-9471.028ENSPVAG00000003852ZNF385C9745.585Pteropus_vampyrus
ENSXCOG00000006303-9967.880ENSPNYG00000015868-9667.797Pundamilia_nyererei
ENSXCOG00000006303-9751.259ENSPNYG00000011104znf385c9951.247Pundamilia_nyererei
ENSXCOG00000006303-9250.617ENSPNAG00000028718znf385c9951.750Pygocentrus_nattereri
ENSXCOG00000006303-9751.779ENSPNAG00000012405-9946.973Pygocentrus_nattereri
ENSXCOG00000006303-8642.636ENSRNOG00000025370Zfp385c10044.474Rattus_norvegicus
ENSXCOG00000006303-10045.000ENSRBIG00000030240ZNF385C10045.000Rhinopithecus_bieti
ENSXCOG00000006303-10045.000ENSRROG00000034452ZNF385C10045.000Rhinopithecus_roxellana
ENSXCOG00000006303-10044.111ENSSBOG00000030723ZNF385C10044.368Saimiri_boliviensis_boliviensis
ENSXCOG00000006303-9846.778ENSSHAG00000006918ZNF385C9346.737Sarcophilus_harrisii
ENSXCOG00000006303-6849.338ENSSFOG00015023128znf385c7449.338Scleropages_formosus
ENSXCOG00000006303-6653.571ENSSFOG00015010100ZNF385C8649.662Scleropages_formosus
ENSXCOG00000006303-9965.680ENSSMAG00000020018-9966.000Scophthalmus_maximus
ENSXCOG00000006303-9747.479ENSSMAG00000007453znf385c9949.787Scophthalmus_maximus
ENSXCOG00000006303-9748.182ENSSDUG00000022960znf385c9948.065Seriola_dumerili
ENSXCOG00000006303-9967.641ENSSDUG00000021332-9267.823Seriola_dumerili
ENSXCOG00000006303-9968.031ENSSLDG00000019275-9966.814Seriola_lalandi_dorsalis
ENSXCOG00000006303-9750.478ENSSLDG00000017600znf385c9947.571Seriola_lalandi_dorsalis
ENSXCOG00000006303-9750.627ENSSPUG00000013129ZNF385C9850.251Sphenodon_punctatus
ENSXCOG00000006303-9748.093ENSSPAG00000006535znf385c9948.101Stegastes_partitus
ENSXCOG00000006303-8867.826ENSSPAG00000014005-9967.826Stegastes_partitus
ENSXCOG00000006303-9750.900ENSTGUG00000002501ZNF385C9948.298Taeniopygia_guttata
ENSXCOG00000006303-9754.545ENSTRUG00000015771znf385c10051.648Takifugu_rubripes
ENSXCOG00000006303-9962.025ENSTRUG00000011082-9860.628Takifugu_rubripes
ENSXCOG00000006303-9755.330ENSTNIG00000011714znf385c9953.846Tetraodon_nigroviridis
ENSXCOG00000006303-9948.139ENSTNIG00000005317-9167.164Tetraodon_nigroviridis
ENSXCOG00000006303-9744.000ENSTTRG00000006632ZNF385C9745.775Tursiops_truncatus
ENSXCOG00000006303-9843.256ENSUAMG00000024598ZNF385C9844.444Ursus_americanus
ENSXCOG00000006303-9843.488ENSUMAG00000022993ZNF385C9944.208Ursus_maritimus
ENSXCOG00000006303-9742.453ENSVVUG00000020910ZNF385C9941.523Vulpes_vulpes
ENSXCOG00000006303-9745.798ENSXETG00000002298znf385c9749.495Xenopus_tropicalis
ENSXCOG00000006303-8380.172ENSXMAG00000008886znf385c6475.194Xiphophorus_maculatus
ENSXCOG00000006303-9983.705ENSXMAG00000010258-9985.650Xiphophorus_maculatus

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