EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000006325 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 7289 bases
Position: chrKQ557224.1:23250250-23257538
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000008294	MMR_HSR1	PF01926.23	4.4e-07	1	1
ENSXCOP00000008292	MMR_HSR1	PF01926.23	5.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000008391	-	1371	-	ENSXCOP00000008292	456 (aa)	-	-
ENSXCOT00000008393	-	1326	-	ENSXCOP00000008294	441 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000006325's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000006325's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000006325	-	98	64.896	ENSXCOG00000008734	-	98	65.207
ENSXCOG00000006325	-	98	50.897	ENSXCOG00000014178	zgc:153654	94	50.897

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000006325	-	99	75.399	ENSAPOG00000011126	-	92	74.887	Acanthochromis_polyacanthus
ENSXCOG00000006325	-	98	50.913	ENSAPOG00000000010	zgc:153654	96	50.913	Acanthochromis_polyacanthus
ENSXCOG00000006325	-	65	75.610	ENSACIG00000023205	-	96	75.610	Amphilophus_citrinellus
ENSXCOG00000006325	-	99	75.515	ENSACIG00000009430	-	98	75.172	Amphilophus_citrinellus
ENSXCOG00000006325	-	98	51.030	ENSACIG00000018021	zgc:153654	99	51.030	Amphilophus_citrinellus
ENSXCOG00000006325	-	98	76.606	ENSAOCG00000008818	si:ch211-197g15.10	98	76.027	Amphiprion_ocellaris
ENSXCOG00000006325	-	98	52.392	ENSAOCG00000011919	zgc:153654	95	51.562	Amphiprion_ocellaris
ENSXCOG00000006325	-	98	52.392	ENSAPEG00000012978	zgc:153654	95	51.562	Amphiprion_percula
ENSXCOG00000006325	-	98	76.147	ENSAPEG00000006547	si:ch211-197g15.10	97	76.147	Amphiprion_percula
ENSXCOG00000006325	-	98	71.330	ENSATEG00000016811	-	98	71.429	Anabas_testudineus
ENSXCOG00000006325	-	99	64.155	ENSATEG00000016818	-	96	64.155	Anabas_testudineus
ENSXCOG00000006325	-	98	53.776	ENSATEG00000008195	zgc:153654	96	54.005	Anabas_testudineus
ENSXCOG00000006325	-	98	71.789	ENSATEG00000016836	-	97	71.789	Anabas_testudineus
ENSXCOG00000006325	-	99	65.525	ENSATEG00000016831	-	96	65.525	Anabas_testudineus
ENSXCOG00000006325	-	98	77.030	ENSACLG00000021969	-	98	77.030	Astatotilapia_calliptera
ENSXCOG00000006325	-	98	77.064	ENSACLG00000022167	-	98	77.064	Astatotilapia_calliptera
ENSXCOG00000006325	-	98	74.771	ENSACLG00000013499	-	98	74.771	Astatotilapia_calliptera
ENSXCOG00000006325	-	98	75.917	ENSACLG00000022141	-	95	75.917	Astatotilapia_calliptera
ENSXCOG00000006325	-	99	50.446	ENSACLG00000009420	zgc:153654	94	50.446	Astatotilapia_calliptera
ENSXCOG00000006325	-	99	57.788	ENSAMXG00000031541	-	99	57.788	Astyanax_mexicanus
ENSXCOG00000006325	-	99	53.468	ENSAMXG00000002119	-	100	53.468	Astyanax_mexicanus
ENSXCOG00000006325	-	99	49.661	ENSCPBG00000016962	-	99	50.000	Chrysemys_picta_bellii
ENSXCOG00000006325	-	98	78.372	ENSCVAG00000000409	-	94	78.788	Cyprinodon_variegatus
ENSXCOG00000006325	-	97	50.812	ENSCVAG00000013437	zgc:153654	91	50.812	Cyprinodon_variegatus
ENSXCOG00000006325	-	99	78.719	ENSCVAG00000000405	-	97	78.767	Cyprinodon_variegatus
ENSXCOG00000006325	-	99	77.574	ENSCVAG00000015674	-	98	77.626	Cyprinodon_variegatus
ENSXCOG00000006325	-	74	73.860	ENSCVAG00000004989	-	100	73.860	Cyprinodon_variegatus
ENSXCOG00000006325	-	99	74.661	ENSCVAG00000010378	-	98	74.718	Cyprinodon_variegatus
ENSXCOG00000006325	-	98	55.023	ENSDARG00000002293	si:ch211-197g15.6	97	55.023	Danio_rerio
ENSXCOG00000006325	-	99	51.454	ENSDARG00000094984	si:ch211-197g15.8	100	51.454	Danio_rerio
ENSXCOG00000006325	-	68	56.908	ENSDARG00000094747	si:ch211-197g15.6	90	56.908	Danio_rerio
ENSXCOG00000006325	-	98	55.128	ENSDARG00000071361	si:ch211-197g15.10	99	55.128	Danio_rerio
ENSXCOG00000006325	-	99	53.587	ENSDARG00000092883	si:dkey-193b15.5	99	53.587	Danio_rerio
ENSXCOG00000006325	-	98	54.195	ENSDARG00000060322	zgc:153654	98	54.195	Danio_rerio
ENSXCOG00000006325	-	99	55.556	ENSDARG00000071355	si:ch211-197g15.7	98	64.231	Danio_rerio
ENSXCOG00000006325	-	98	57.373	ENSDARG00000009673	si:ch211-197g15.6	90	57.373	Danio_rerio
ENSXCOG00000006325	-	99	55.656	ENSELUG00000008265	zgc:153654	97	55.656	Esox_lucius
ENSXCOG00000006325	-	99	62.585	ENSELUG00000013242	si:ch211-197g15.10	99	62.785	Esox_lucius
ENSXCOG00000006325	-	59	78.244	ENSFHEG00000019876	-	95	78.244	Fundulus_heteroclitus
ENSXCOG00000006325	-	99	51.885	ENSFHEG00000009844	zgc:153654	96	51.885	Fundulus_heteroclitus
ENSXCOG00000006325	-	99	79.499	ENSFHEG00000019903	-	98	79.499	Fundulus_heteroclitus
ENSXCOG00000006325	-	99	76.644	ENSFHEG00000013876	-	99	76.364	Fundulus_heteroclitus
ENSXCOG00000006325	-	86	47.273	ENSGMOG00000012872	-	99	47.273	Gadus_morhua
ENSXCOG00000006325	-	99	52.360	ENSGAFG00000019143	zgc:153654	92	52.360	Gambusia_affinis
ENSXCOG00000006325	-	98	64.450	ENSGAFG00000007761	-	98	64.760	Gambusia_affinis
ENSXCOG00000006325	-	98	50.797	ENSGACG00000009755	zgc:153654	96	51.025	Gasterosteus_aculeatus
ENSXCOG00000006325	-	99	64.302	ENSGACG00000007958	si:ch211-197g15.10	98	64.302	Gasterosteus_aculeatus
ENSXCOG00000006325	-	99	48.984	ENSGAGG00000022623	-	99	49.552	Gopherus_agassizii
ENSXCOG00000006325	-	98	75.229	ENSHBUG00000018097	-	98	75.229	Haplochromis_burtoni
ENSXCOG00000006325	-	98	77.294	ENSHBUG00000001391	-	98	77.294	Haplochromis_burtoni
ENSXCOG00000006325	-	99	50.554	ENSHBUG00000008124	zgc:153654	94	50.554	Haplochromis_burtoni
ENSXCOG00000006325	-	99	54.853	ENSIPUG00000014380	zgc:153654	99	54.853	Ictalurus_punctatus
ENSXCOG00000006325	-	98	54.444	ENSIPUG00000025096	si:ch211-197g15.6	95	54.444	Ictalurus_punctatus
ENSXCOG00000006325	-	98	74.769	ENSKMAG00000004691	si:ch211-197g15.10	100	76.010	Kryptolebias_marmoratus
ENSXCOG00000006325	-	98	50.227	ENSKMAG00000013818	zgc:153654	94	50.227	Kryptolebias_marmoratus
ENSXCOG00000006325	-	99	67.647	ENSLBEG00000027620	si:ch211-197g15.10	99	67.647	Labrus_bergylta
ENSXCOG00000006325	-	98	73.333	ENSMAMG00000006432	-	98	73.333	Mastacembelus_armatus
ENSXCOG00000006325	-	64	72.028	ENSMAMG00000006527	-	97	72.535	Mastacembelus_armatus
ENSXCOG00000006325	-	99	69.635	ENSMAMG00000006478	-	98	69.635	Mastacembelus_armatus
ENSXCOG00000006325	-	61	68.284	ENSMAMG00000006464	-	95	69.318	Mastacembelus_armatus
ENSXCOG00000006325	-	98	53.425	ENSMAMG00000002775	zgc:153654	93	53.425	Mastacembelus_armatus
ENSXCOG00000006325	-	98	75.459	ENSMZEG00005016298	-	95	75.459	Maylandia_zebra
ENSXCOG00000006325	-	97	78.271	ENSMZEG00005016305	-	96	78.271	Maylandia_zebra
ENSXCOG00000006325	-	98	74.312	ENSMZEG00005009847	-	91	74.312	Maylandia_zebra
ENSXCOG00000006325	-	98	76.566	ENSMZEG00005016191	-	98	76.566	Maylandia_zebra
ENSXCOG00000006325	-	99	50.333	ENSMZEG00005000213	zgc:153654	94	50.333	Maylandia_zebra
ENSXCOG00000006325	-	98	51.826	ENSMMOG00000008706	zgc:153654	95	51.810	Mola_mola
ENSXCOG00000006325	-	98	71.101	ENSMALG00000017812	-	98	71.330	Monopterus_albus
ENSXCOG00000006325	-	98	50.000	ENSMALG00000010184	zgc:153654	96	50.000	Monopterus_albus
ENSXCOG00000006325	-	98	74.424	ENSNBRG00000021454	-	97	75.234	Neolamprologus_brichardi
ENSXCOG00000006325	-	98	74.014	ENSNBRG00000021612	-	98	73.068	Neolamprologus_brichardi
ENSXCOG00000006325	-	99	50.554	ENSNBRG00000021369	zgc:153654	94	50.554	Neolamprologus_brichardi
ENSXCOG00000006325	-	98	73.256	ENSNBRG00000022795	-	97	74.155	Neolamprologus_brichardi
ENSXCOG00000006325	-	98	77.030	ENSNBRG00000021762	-	98	77.030	Neolamprologus_brichardi
ENSXCOG00000006325	-	99	75.973	ENSNBRG00000021865	-	96	75.973	Neolamprologus_brichardi
ENSXCOG00000006325	-	99	73.349	ENSONIG00000014147	-	99	73.349	Oreochromis_niloticus
ENSXCOG00000006325	-	99	51.794	ENSONIG00000001120	zgc:153654	94	51.794	Oreochromis_niloticus
ENSXCOG00000006325	-	99	74.661	ENSONIG00000012749	-	94	74.661	Oreochromis_niloticus
ENSXCOG00000006325	-	98	73.165	ENSORLG00000000696	-	98	73.227	Oryzias_latipes
ENSXCOG00000006325	-	98	64.045	ENSORLG00000030184	-	100	64.045	Oryzias_latipes
ENSXCOG00000006325	-	98	64.189	ENSORLG00000027011	-	99	63.719	Oryzias_latipes
ENSXCOG00000006325	-	98	71.789	ENSORLG00000008608	-	98	71.854	Oryzias_latipes
ENSXCOG00000006325	-	98	73.165	ENSORLG00020014451	-	98	73.227	Oryzias_latipes_hni
ENSXCOG00000006325	-	65	63.000	ENSORLG00020014413	-	97	63.000	Oryzias_latipes_hni
ENSXCOG00000006325	-	98	64.253	ENSORLG00020014470	-	100	63.820	Oryzias_latipes_hni
ENSXCOG00000006325	-	98	64.494	ENSORLG00015009930	-	100	64.494	Oryzias_latipes_hsok
ENSXCOG00000006325	-	98	73.394	ENSORLG00015000293	-	98	73.455	Oryzias_latipes_hsok
ENSXCOG00000006325	-	57	60.870	ENSORLG00015009911	-	100	60.870	Oryzias_latipes_hsok
ENSXCOG00000006325	-	98	73.502	ENSORLG00015009849	-	99	73.502	Oryzias_latipes_hsok
ENSXCOG00000006325	-	99	71.396	ENSORLG00015015397	-	97	70.880	Oryzias_latipes_hsok
ENSXCOG00000006325	-	98	71.789	ENSORLG00015009699	-	98	71.854	Oryzias_latipes_hsok
ENSXCOG00000006325	-	97	61.731	ENSOMEG00000003965	-	97	61.731	Oryzias_melastigma
ENSXCOG00000006325	-	98	59.417	ENSOMEG00000004075	-	99	59.641	Oryzias_melastigma
ENSXCOG00000006325	-	98	55.305	ENSOMEG00000004053	-	99	55.088	Oryzias_melastigma
ENSXCOG00000006325	-	97	60.592	ENSOMEG00000004005	-	99	60.870	Oryzias_melastigma
ENSXCOG00000006325	-	98	60.181	ENSOMEG00000003940	-	100	60.406	Oryzias_melastigma
ENSXCOG00000006325	-	57	73.810	ENSOMEG00000020481	-	99	74.104	Oryzias_melastigma
ENSXCOG00000006325	-	65	55.944	ENSOMEG00000003821	-	98	55.986	Oryzias_melastigma
ENSXCOG00000006325	-	98	71.034	ENSOMEG00000000087	-	98	70.208	Oryzias_melastigma
ENSXCOG00000006325	-	98	75.917	ENSOMEG00000004183	-	98	75.973	Oryzias_melastigma
ENSXCOG00000006325	-	98	67.597	ENSOMEG00000003837	-	95	68.522	Oryzias_melastigma
ENSXCOG00000006325	-	98	74.253	ENSOMEG00000004201	-	98	74.253	Oryzias_melastigma
ENSXCOG00000006325	-	98	66.067	ENSOMEG00000004019	-	97	65.487	Oryzias_melastigma
ENSXCOG00000006325	-	60	46.970	ENSPKIG00000020102	-	98	46.970	Paramormyrops_kingsleyae
ENSXCOG00000006325	-	61	51.471	ENSPKIG00000018512	-	92	49.275	Paramormyrops_kingsleyae
ENSXCOG00000006325	-	62	55.636	ENSPKIG00000020074	-	93	55.636	Paramormyrops_kingsleyae
ENSXCOG00000006325	-	62	47.500	ENSPKIG00000018649	-	93	47.500	Paramormyrops_kingsleyae
ENSXCOG00000006325	-	65	48.136	ENSPKIG00000018532	-	96	48.276	Paramormyrops_kingsleyae
ENSXCOG00000006325	-	65	53.310	ENSPKIG00000020057	-	96	53.310	Paramormyrops_kingsleyae
ENSXCOG00000006325	-	65	50.859	ENSPKIG00000018587	-	97	50.859	Paramormyrops_kingsleyae
ENSXCOG00000006325	-	61	54.647	ENSPKIG00000018686	-	92	52.381	Paramormyrops_kingsleyae
ENSXCOG00000006325	-	99	46.818	ENSPSIG00000002607	-	99	46.712	Pelodiscus_sinensis
ENSXCOG00000006325	-	67	43.144	ENSPMGG00000000928	zgc:153654	93	45.819	Periophthalmus_magnuspinnatus
ENSXCOG00000006325	-	98	43.681	ENSPMAG00000000471	-	99	43.172	Petromyzon_marinus
ENSXCOG00000006325	-	98	51.242	ENSPFOG00000014250	zgc:153654	99	50.881	Poecilia_formosa
ENSXCOG00000006325	-	98	71.136	ENSPFOG00000022999	-	100	71.136	Poecilia_formosa
ENSXCOG00000006325	-	98	63.719	ENSPFOG00000011182	-	98	64.027	Poecilia_formosa
ENSXCOG00000006325	-	62	74.632	ENSPFOG00000000122	-	97	73.864	Poecilia_formosa
ENSXCOG00000006325	-	99	89.703	ENSPFOG00000000111	-	98	89.703	Poecilia_formosa
ENSXCOG00000006325	-	62	92.674	ENSPFOG00000015594	-	95	92.748	Poecilia_formosa
ENSXCOG00000006325	-	59	90.458	ENSPLAG00000014458	-	95	90.458	Poecilia_latipinna
ENSXCOG00000006325	-	98	64.450	ENSPLAG00000021480	-	99	64.706	Poecilia_latipinna
ENSXCOG00000006325	-	99	90.433	ENSPLAG00000001307	-	98	90.433	Poecilia_latipinna
ENSXCOG00000006325	-	98	71.136	ENSPLAG00000001304	-	98	71.136	Poecilia_latipinna
ENSXCOG00000006325	-	67	71.617	ENSPLAG00000001301	-	63	71.617	Poecilia_latipinna
ENSXCOG00000006325	-	98	51.835	ENSPLAG00000007998	zgc:153654	93	51.835	Poecilia_latipinna
ENSXCOG00000006325	-	65	73.356	ENSPMEG00000013339	-	98	73.356	Poecilia_mexicana
ENSXCOG00000006325	-	59	90.458	ENSPMEG00000016192	-	90	90.458	Poecilia_mexicana
ENSXCOG00000006325	-	67	71.947	ENSPMEG00000013347	-	63	71.947	Poecilia_mexicana
ENSXCOG00000006325	-	99	89.977	ENSPMEG00000013357	-	98	89.977	Poecilia_mexicana
ENSXCOG00000006325	-	98	64.908	ENSPMEG00000006889	-	98	65.217	Poecilia_mexicana
ENSXCOG00000006325	-	98	51.708	ENSPMEG00000003409	zgc:153654	93	51.708	Poecilia_mexicana
ENSXCOG00000006325	-	67	72.607	ENSPREG00000011808	-	63	72.607	Poecilia_reticulata
ENSXCOG00000006325	-	62	81.319	ENSPREG00000011848	-	90	82.528	Poecilia_reticulata
ENSXCOG00000006325	-	98	63.532	ENSPREG00000009457	-	98	63.844	Poecilia_reticulata
ENSXCOG00000006325	-	99	87.872	ENSPREG00000011892	-	98	86.067	Poecilia_reticulata
ENSXCOG00000006325	-	98	51.708	ENSPREG00000010723	zgc:153654	93	51.708	Poecilia_reticulata
ENSXCOG00000006325	-	98	74.541	ENSPNYG00000014740	-	98	74.541	Pundamilia_nyererei
ENSXCOG00000006325	-	99	50.446	ENSPNYG00000013106	zgc:153654	94	50.446	Pundamilia_nyererei
ENSXCOG00000006325	-	98	76.322	ENSPNYG00000016375	-	98	74.827	Pundamilia_nyererei
ENSXCOG00000006325	-	99	55.556	ENSPNAG00000013999	zgc:153654	100	55.556	Pygocentrus_nattereri
ENSXCOG00000006325	-	61	49.451	ENSSFOG00015018249	-	98	49.462	Scleropages_formosus
ENSXCOG00000006325	-	59	44.106	ENSSFOG00015022102	-	92	44.106	Scleropages_formosus
ENSXCOG00000006325	-	63	75.000	ENSSDUG00000009870	-	93	75.000	Seriola_dumerili
ENSXCOG00000006325	-	98	52.055	ENSSDUG00000012708	zgc:153654	94	51.584	Seriola_dumerili
ENSXCOG00000006325	-	98	74.541	ENSSDUG00000009840	-	98	74.771	Seriola_dumerili
ENSXCOG00000006325	-	98	52.055	ENSSLDG00000022597	zgc:153654	94	51.584	Seriola_lalandi_dorsalis
ENSXCOG00000006325	-	99	69.336	ENSSLDG00000001629	-	99	69.336	Seriola_lalandi_dorsalis
ENSXCOG00000006325	-	65	74.306	ENSSLDG00000001591	-	83	74.306	Seriola_lalandi_dorsalis
ENSXCOG00000006325	-	98	49.773	ENSSPUG00000010680	-	100	50.461	Sphenodon_punctatus
ENSXCOG00000006325	-	64	62.544	ENSSPAG00000007037	-	94	62.544	Stegastes_partitus
ENSXCOG00000006325	-	98	51.136	ENSSPAG00000018073	zgc:153654	95	51.136	Stegastes_partitus
ENSXCOG00000006325	-	61	75.373	ENSSPAG00000005921	-	90	75.564	Stegastes_partitus
ENSXCOG00000006325	-	91	50.495	ENSTRUG00000016083	-	82	50.495	Takifugu_rubripes
ENSXCOG00000006325	-	64	51.579	ENSTNIG00000017187	zgc:153654	100	51.579	Tetraodon_nigroviridis
ENSXCOG00000006325	-	67	72.607	ENSXMAG00000028256	-	64	72.607	Xiphophorus_maculatus
ENSXCOG00000006325	-	98	63.532	ENSXMAG00000002325	-	98	63.844	Xiphophorus_maculatus
ENSXCOG00000006325	-	98	51.936	ENSXMAG00000010193	zgc:153654	93	51.936	Xiphophorus_maculatus
ENSXCOG00000006325	-	99	96.128	ENSXMAG00000002467	-	98	96.128	Xiphophorus_maculatus