EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000006365 (Gene tree)
Gene ID: -
Gene Symbol: mkrn4
Alias: fi27c05|si:ch73-237c6.4|wu:fi27c05
Full Name: makorin%2C ring finger protein%2C 4
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 3506 bases
Position: chrKQ557201.1:12548398-12551903
Accession: ZDB-GENE-030131-5954
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000008310	zf-CCCH	PF00642.24	3.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000008410	-	1059	-	ENSXCOP00000008310	352 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000006365's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000006365's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000006365	mkrn4	83	30.211	ENSXCOG00000002078	mkrn1	74	31.402

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000006365	mkrn4	98	54.885	ENSAPOG00000006267	mkrn4	99	54.885	Acanthochromis_polyacanthus
ENSXCOG00000006365	mkrn4	83	30.887	ENSAPOG00000024355	mkrn1	73	30.887	Acanthochromis_polyacanthus
ENSXCOG00000006365	mkrn4	85	61.716	ENSACIG00000001902	mkrn4	96	62.046	Amphilophus_citrinellus
ENSXCOG00000006365	mkrn4	83	31.562	ENSACIG00000021136	mkrn1	73	31.464	Amphilophus_citrinellus
ENSXCOG00000006365	mkrn4	98	48.571	ENSAOCG00000013661	mkrn4	95	48.571	Amphiprion_ocellaris
ENSXCOG00000006365	mkrn4	83	30.061	ENSAPEG00000001360	mkrn1	73	30.061	Amphiprion_percula
ENSXCOG00000006365	mkrn4	95	55.848	ENSAPEG00000019319	mkrn4	98	55.848	Amphiprion_percula
ENSXCOG00000006365	mkrn4	83	30.000	ENSATEG00000023166	mkrn1	73	30.000	Anabas_testudineus
ENSXCOG00000006365	mkrn4	100	55.348	ENSATEG00000020555	mkrn4	97	55.348	Anabas_testudineus
ENSXCOG00000006365	mkrn4	82	37.309	ENSACAG00000002322	-	77	37.309	Anolis_carolinensis
ENSXCOG00000006365	mkrn4	95	59.429	ENSACLG00000002368	mkrn4	98	58.708	Astatotilapia_calliptera
ENSXCOG00000006365	mkrn4	83	32.390	ENSACLG00000013799	mkrn1	73	32.288	Astatotilapia_calliptera
ENSXCOG00000006365	mkrn4	83	32.229	ENSAMXG00000032974	mkrn1	73	32.229	Astyanax_mexicanus
ENSXCOG00000006365	mkrn4	83	41.975	ENSAMXG00000007674	mkrn4	94	39.402	Astyanax_mexicanus
ENSXCOG00000006365	mkrn4	83	31.792	ENSBTAG00000004512	MKRN2	81	30.636	Bos_taurus
ENSXCOG00000006365	mkrn4	83	31.232	ENSCHOG00000005438	MKRN2	82	30.086	Choloepus_hoffmanni
ENSXCOG00000006365	mkrn4	70	34.686	ENSCPBG00000017873	-	92	33.929	Chrysemys_picta_bellii
ENSXCOG00000006365	mkrn4	83	32.394	ENSCPBG00000026356	MKRN2	71	31.268	Chrysemys_picta_bellii
ENSXCOG00000006365	mkrn4	78	31.359	ENSCSAVG00000006377	-	93	31.359	Ciona_savignyi
ENSXCOG00000006365	mkrn4	73	32.061	ENSCANG00000027803	-	82	31.939	Colobus_angolensis_palliatus
ENSXCOG00000006365	mkrn4	83	32.110	ENSCSEG00000020415	mkrn2	79	32.827	Cynoglossus_semilaevis
ENSXCOG00000006365	mkrn4	95	51.462	ENSCSEG00000001896	mkrn4	97	50.696	Cynoglossus_semilaevis
ENSXCOG00000006365	mkrn4	83	31.402	ENSCVAG00000007296	mkrn1	74	31.402	Cyprinodon_variegatus
ENSXCOG00000006365	mkrn4	83	40.729	ENSDARG00000028295	mkrn4	82	42.202	Danio_rerio
ENSXCOG00000006365	mkrn4	83	30.303	ENSDARG00000041665	mkrn1	65	42.553	Danio_rerio
ENSXCOG00000006365	mkrn4	82	31.003	ENSDORG00000003480	Mkrn1	78	31.003	Dipodomys_ordii
ENSXCOG00000006365	mkrn4	67	41.045	ENSELUG00000011572	mkrn1	75	30.117	Esox_lucius
ENSXCOG00000006365	mkrn4	85	41.888	ENSELUG00000011371	mkrn4	95	40.000	Esox_lucius
ENSXCOG00000006365	mkrn4	83	32.792	ENSFALG00000003685	-	74	34.650	Ficedula_albicollis
ENSXCOG00000006365	mkrn4	85	30.792	ENSFALG00000003717	MKRN1	78	30.814	Ficedula_albicollis
ENSXCOG00000006365	mkrn4	100	68.715	ENSFHEG00000004528	mkrn4	100	70.166	Fundulus_heteroclitus
ENSXCOG00000006365	mkrn4	83	31.056	ENSFHEG00000011140	mkrn1	73	30.745	Fundulus_heteroclitus
ENSXCOG00000006365	mkrn4	94	30.871	ENSFHEG00000006905	mkrn2	97	30.871	Fundulus_heteroclitus
ENSXCOG00000006365	mkrn4	57	48.780	ENSGMOG00000018490	mkrn2	58	48.780	Gadus_morhua
ENSXCOG00000006365	mkrn4	69	45.455	ENSGMOG00000008221	-	97	43.644	Gadus_morhua
ENSXCOG00000006365	mkrn4	100	97.159	ENSGAFG00000004107	mkrn4	100	97.159	Gambusia_affinis
ENSXCOG00000006365	mkrn4	83	30.793	ENSGAFG00000020028	mkrn1	74	30.793	Gambusia_affinis
ENSXCOG00000006365	mkrn4	83	32.209	ENSGACG00000019227	mkrn1	72	32.209	Gasterosteus_aculeatus
ENSXCOG00000006365	mkrn4	69	50.988	ENSGACG00000008285	mkrn4	97	51.613	Gasterosteus_aculeatus
ENSXCOG00000006365	mkrn4	64	40.541	ENSGACG00000003396	mkrn2	64	40.541	Gasterosteus_aculeatus
ENSXCOG00000006365	mkrn4	83	36.050	ENSGAGG00000010951	-	91	33.952	Gopherus_agassizii
ENSXCOG00000006365	mkrn4	83	30.267	ENSGAGG00000013140	MKRN1	71	30.267	Gopherus_agassizii
ENSXCOG00000006365	mkrn4	83	32.113	ENSGAGG00000022563	MKRN2	83	30.857	Gopherus_agassizii
ENSXCOG00000006365	mkrn4	98	60.399	ENSHBUG00000022825	mkrn4	95	60.684	Haplochromis_burtoni
ENSXCOG00000006365	mkrn4	82	30.699	ENSHGLG00000011503	-	78	30.699	Heterocephalus_glaber_female
ENSXCOG00000006365	mkrn4	82	30.909	ENSHGLG00100019127	-	78	30.909	Heterocephalus_glaber_male
ENSXCOG00000006365	mkrn4	95	45.455	ENSHCOG00000008354	mkrn4	93	44.809	Hippocampus_comes
ENSXCOG00000006365	mkrn4	83	30.769	ENSIPUG00000016956	mkrn1	73	30.769	Ictalurus_punctatus
ENSXCOG00000006365	mkrn4	83	45.846	ENSIPUG00000000711	mkrn4	93	42.895	Ictalurus_punctatus
ENSXCOG00000006365	mkrn4	83	31.503	ENSJJAG00000019765	Mkrn2	83	30.117	Jaculus_jaculus
ENSXCOG00000006365	mkrn4	91	59.940	ENSKMAG00000007023	mkrn4	99	60.114	Kryptolebias_marmoratus
ENSXCOG00000006365	mkrn4	83	31.481	ENSLBEG00000024326	mkrn1	73	31.481	Labrus_bergylta
ENSXCOG00000006365	mkrn4	100	51.309	ENSLBEG00000014889	mkrn4	97	51.309	Labrus_bergylta
ENSXCOG00000006365	mkrn4	83	31.503	ENSLOCG00000013970	mkrn2	81	32.258	Lepisosteus_oculatus
ENSXCOG00000006365	mkrn4	83	32.326	ENSLOCG00000016132	mkrn1	74	32.132	Lepisosteus_oculatus
ENSXCOG00000006365	mkrn4	95	40.000	ENSLOCG00000000455	mkrn4	94	40.789	Lepisosteus_oculatus
ENSXCOG00000006365	mkrn4	83	30.769	ENSLAFG00000018408	MKRN1	71	30.631	Loxodonta_africana
ENSXCOG00000006365	mkrn4	100	56.389	ENSMAMG00000011051	mkrn4	100	56.389	Mastacembelus_armatus
ENSXCOG00000006365	mkrn4	95	61.243	ENSMZEG00005001958	mkrn4	98	60.465	Maylandia_zebra
ENSXCOG00000006365	mkrn4	83	32.390	ENSMZEG00005019125	mkrn1	73	32.288	Maylandia_zebra
ENSXCOG00000006365	mkrn4	51	45.968	ENSMMOG00000017861	mkrn2	81	32.836	Mola_mola
ENSXCOG00000006365	mkrn4	85	49.164	ENSMMOG00000004759	mkrn4	86	49.164	Mola_mola
ENSXCOG00000006365	mkrn4	83	31.288	ENSMMOG00000008228	mkrn1	75	31.288	Mola_mola
ENSXCOG00000006365	mkrn4	95	49.280	ENSMALG00000018791	mkrn4	96	49.304	Monopterus_albus
ENSXCOG00000006365	mkrn4	83	32.727	ENSMALG00000021168	mkrn2	79	32.523	Monopterus_albus
ENSXCOG00000006365	mkrn4	83	31.231	MGP_PahariEiJ_G0022004	Mkrn1	78	30.793	Mus_pahari
ENSXCOG00000006365	mkrn4	82	30.606	ENSMPUG00000003453	-	78	30.581	Mustela_putorius_furo
ENSXCOG00000006365	mkrn4	82	32.119	ENSMLUG00000023455	-	99	33.993	Myotis_lucifugus
ENSXCOG00000006365	mkrn4	55	45.968	ENSMLUG00000017643	MKRN2	82	31.014	Myotis_lucifugus
ENSXCOG00000006365	mkrn4	83	31.304	ENSNGAG00000012579	Mkrn2	82	30.145	Nannospalax_galili
ENSXCOG00000006365	mkrn4	83	30.931	ENSNGAG00000019077	Mkrn1	69	31.832	Nannospalax_galili
ENSXCOG00000006365	mkrn4	98	60.057	ENSNBRG00000010946	mkrn4	99	60.057	Neolamprologus_brichardi
ENSXCOG00000006365	mkrn4	83	32.075	ENSONIG00000014150	mkrn1	73	31.975	Oreochromis_niloticus
ENSXCOG00000006365	mkrn4	95	60.411	ENSONIG00000011870	mkrn4	100	60.231	Oreochromis_niloticus
ENSXCOG00000006365	mkrn4	83	32.000	ENSOCUG00000014171	MKRN2	82	31.054	Oryctolagus_cuniculus
ENSXCOG00000006365	mkrn4	66	42.466	ENSORLG00000009824	mkrn2	60	42.466	Oryzias_latipes
ENSXCOG00000006365	mkrn4	100	56.022	ENSORLG00000006615	mkrn4	100	56.583	Oryzias_latipes
ENSXCOG00000006365	mkrn4	83	30.938	ENSORLG00000012765	mkrn1	76	30.484	Oryzias_latipes
ENSXCOG00000006365	mkrn4	100	56.338	ENSORLG00020010514	mkrn4	100	56.901	Oryzias_latipes_hni
ENSXCOG00000006365	mkrn4	66	42.466	ENSORLG00020006184	mkrn2	60	42.466	Oryzias_latipes_hni
ENSXCOG00000006365	mkrn4	83	30.484	ENSORLG00020020446	mkrn1	76	30.484	Oryzias_latipes_hni
ENSXCOG00000006365	mkrn4	100	56.338	ENSORLG00015002476	mkrn4	100	56.901	Oryzias_latipes_hsok
ENSXCOG00000006365	mkrn4	66	42.466	ENSORLG00015002368	mkrn2	60	42.466	Oryzias_latipes_hsok
ENSXCOG00000006365	mkrn4	83	30.745	ENSORLG00015018892	mkrn1	74	30.745	Oryzias_latipes_hsok
ENSXCOG00000006365	mkrn4	83	30.503	ENSOMEG00000019338	mkrn1	74	30.503	Oryzias_melastigma
ENSXCOG00000006365	mkrn4	100	53.782	ENSOMEG00000020049	mkrn4	100	53.782	Oryzias_melastigma
ENSXCOG00000006365	mkrn4	81	39.446	ENSOGAG00000024631	-	98	38.889	Otolemur_garnettii
ENSXCOG00000006365	mkrn4	91	40.885	ENSPKIG00000016323	mkrn4	94	40.299	Paramormyrops_kingsleyae
ENSXCOG00000006365	mkrn4	82	32.749	ENSPSIG00000010483	MKRN2	81	31.579	Pelodiscus_sinensis
ENSXCOG00000006365	mkrn4	50	50.000	ENSPMGG00000018266	mkrn1	87	30.026	Periophthalmus_magnuspinnatus
ENSXCOG00000006365	mkrn4	82	32.653	ENSPMGG00000016333	-	79	31.633	Periophthalmus_magnuspinnatus
ENSXCOG00000006365	mkrn4	57	41.791	ENSPFOG00000006693	mkrn1	74	30.581	Poecilia_formosa
ENSXCOG00000006365	mkrn4	100	94.901	ENSPFOG00000024691	mkrn4	100	94.901	Poecilia_formosa
ENSXCOG00000006365	mkrn4	100	95.455	ENSPLAG00000013447	mkrn4	100	95.455	Poecilia_latipinna
ENSXCOG00000006365	mkrn4	57	41.791	ENSPLAG00000013918	mkrn1	74	30.488	Poecilia_latipinna
ENSXCOG00000006365	mkrn4	85	31.548	ENSPMEG00000002644	mkrn2	89	31.548	Poecilia_mexicana
ENSXCOG00000006365	mkrn4	57	41.791	ENSPMEG00000007265	mkrn1	76	30.581	Poecilia_mexicana
ENSXCOG00000006365	mkrn4	100	94.901	ENSPMEG00000014195	mkrn4	100	94.901	Poecilia_mexicana
ENSXCOG00000006365	mkrn4	100	94.901	ENSPREG00000022638	mkrn4	100	94.901	Poecilia_reticulata
ENSXCOG00000006365	mkrn4	60	48.000	ENSPREG00000021199	mkrn2	61	48.000	Poecilia_reticulata
ENSXCOG00000006365	mkrn4	83	32.390	ENSPNYG00000014904	mkrn1	73	32.288	Pundamilia_nyererei
ENSXCOG00000006365	mkrn4	98	60.345	ENSPNYG00000022367	mkrn4	99	60.345	Pundamilia_nyererei
ENSXCOG00000006365	mkrn4	95	42.049	ENSPNAG00000017925	mkrn4	93	42.318	Pygocentrus_nattereri
ENSXCOG00000006365	mkrn4	83	31.928	ENSPNAG00000008708	mkrn1	73	32.229	Pygocentrus_nattereri
ENSXCOG00000006365	mkrn4	93	39.881	ENSSFOG00015022480	mkrn4	97	39.216	Scleropages_formosus
ENSXCOG00000006365	mkrn4	83	30.226	ENSSFOG00015001191	mkrn2	81	30.226	Scleropages_formosus
ENSXCOG00000006365	mkrn4	57	44.898	ENSSMAG00000006350	mkrn2	79	31.902	Scophthalmus_maximus
ENSXCOG00000006365	mkrn4	83	30.462	ENSSMAG00000011223	mkrn1	73	30.462	Scophthalmus_maximus
ENSXCOG00000006365	mkrn4	100	54.372	ENSSMAG00000019369	mkrn4	97	56.011	Scophthalmus_maximus
ENSXCOG00000006365	mkrn4	83	30.721	ENSSDUG00000018541	mkrn1	73	30.721	Seriola_dumerili
ENSXCOG00000006365	mkrn4	100	58.356	ENSSDUG00000010454	mkrn4	100	58.630	Seriola_dumerili
ENSXCOG00000006365	mkrn4	83	30.721	ENSSLDG00000014411	mkrn1	73	30.721	Seriola_lalandi_dorsalis
ENSXCOG00000006365	mkrn4	100	59.331	ENSSLDG00000004587	mkrn4	96	59.610	Seriola_lalandi_dorsalis
ENSXCOG00000006365	mkrn4	84	34.971	ENSSPUG00000013809	-	93	33.171	Sphenodon_punctatus
ENSXCOG00000006365	mkrn4	83	31.098	ENSSPAG00000009068	mkrn1	73	31.098	Stegastes_partitus
ENSXCOG00000006365	mkrn4	83	31.143	ENSSSCG00000029877	MKRN2	70	30.000	Sus_scrofa
ENSXCOG00000006365	mkrn4	82	30.422	ENSTGUG00000011669	MKRN1	78	30.422	Taeniopygia_guttata
ENSXCOG00000006365	mkrn4	89	47.452	ENSTRUG00000025139	mkrn4	99	47.452	Takifugu_rubripes
ENSXCOG00000006365	mkrn4	83	31.962	ENSTRUG00000012057	mkrn1	73	31.962	Takifugu_rubripes
ENSXCOG00000006365	mkrn4	50	53.061	ENSTNIG00000007231	mkrn1	79	31.481	Tetraodon_nigroviridis
ENSXCOG00000006365	mkrn4	83	31.515	ENSTNIG00000004883	mkrn2	80	31.212	Tetraodon_nigroviridis
ENSXCOG00000006365	mkrn4	82	32.248	ENSVVUG00000001720	-	75	32.248	Vulpes_vulpes
ENSXCOG00000006365	mkrn4	82	30.435	ENSXMAG00000005086	mkrn1	77	30.960	Xiphophorus_maculatus
ENSXCOG00000006365	mkrn4	100	99.716	ENSXMAG00000010448	mkrn4	100	99.716	Xiphophorus_maculatus