EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000006382 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 4336 bases
Position: chrKQ557203.1:3241523-3245858
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000008322	AF-4	PF05110.13	5.6e-99	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000008427	-	1065	-	ENSXCOP00000008322	354 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000006382's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000006382's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000006382	-	52	60.294	ENSG00000144218	AFF3	64	60.294	Homo_sapiens
ENSXCOG00000006382	-	99	61.749	ENSG00000072364	AFF4	89	63.830	Homo_sapiens
ENSXCOG00000006382	-	100	85.714	ENSACIG00000010592	-	99	85.714	Amphilophus_citrinellus
ENSXCOG00000006382	-	99	58.556	ENSCPOG00000001814	AFF4	99	59.690	Cavia_porcellus
ENSXCOG00000006382	-	99	35.450	ENSCPOG00000006346	AFF3	62	60.294	Cavia_porcellus
ENSXCOG00000006382	-	99	62.192	ENSCCAG00000030353	AFF4	97	61.370	Cebus_capucinus
ENSXCOG00000006382	-	75	45.000	ENSCLAG00000017100	AFF3	62	63.235	Chinchilla_lanigera
ENSXCOG00000006382	-	99	60.598	ENSCPBG00000016549	-	99	61.433	Chrysemys_picta_bellii
ENSXCOG00000006382	-	52	58.824	ENSCGRG00000003408	Aff3	62	57.353	Cricetulus_griseus_crigri
ENSXCOG00000006382	-	56	61.765	ENSDORG00000007294	Aff3	62	61.765	Dipodomys_ordii
ENSXCOG00000006382	-	85	36.076	ENSFALG00000003872	-	52	61.765	Ficedula_albicollis
ENSXCOG00000006382	-	98	63.056	ENSSTOG00000026695	AFF4	100	62.879	Ictidomys_tridecemlineatus
ENSXCOG00000006382	-	53	61.765	ENSSTOG00000012140	AFF3	58	61.765	Ictidomys_tridecemlineatus
ENSXCOG00000006382	-	97	32.546	ENSJJAG00000013155	Aff3	62	60.294	Jaculus_jaculus
ENSXCOG00000006382	-	87	60.502	ENSMICG00000030374	-	87	58.805	Microcebus_murinus
ENSXCOG00000006382	-	99	61.496	MGP_CAROLIEiJ_G0016331	Aff4	100	62.879	Mus_caroli
ENSXCOG00000006382	-	99	61.496	ENSMUSG00000049470	Aff4	100	62.879	Mus_musculus
ENSXCOG00000006382	-	81	46.094	ENSMUSG00000037138	Aff3	53	58.824	Mus_musculus
ENSXCOG00000006382	-	99	62.050	MGP_PahariEiJ_G0017466	Aff4	100	62.879	Mus_pahari
ENSXCOG00000006382	-	99	61.496	MGP_SPRETEiJ_G0017175	Aff4	100	62.879	Mus_spretus
ENSXCOG00000006382	-	97	34.726	ENSNGAG00000002408	Aff3	53	61.765	Nannospalax_galili
ENSXCOG00000006382	-	99	83.898	ENSNBRG00000006285	-	97	83.051	Neolamprologus_brichardi
ENSXCOG00000006382	-	99	71.703	ENSPMGG00000006483	-	98	71.703	Periophthalmus_magnuspinnatus
ENSXCOG00000006382	-	52	58.824	ENSPEMG00000014802	Aff3	62	57.353	Peromyscus_maniculatus_bairdii
ENSXCOG00000006382	-	99	61.918	ENSSBOG00000021562	AFF4	97	61.096	Saimiri_boliviensis_boliviensis
ENSXCOG00000006382	-	98	61.433	ENSSFOG00015000839	-	89	59.167	Scleropages_formosus
ENSXCOG00000006382	-	100	85.794	ENSSPAG00000012349	-	99	85.794	Stegastes_partitus