EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000006387 (Gene tree)
Gene ID: -
Gene Symbol: larp4aa
Alias: larp4a|si:ch211-156j22.2
Full Name: La ribonucleoprotein domain family%2C member 4Aa
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 15372 bases
Position: chrKQ557201.1:12606930-12622301
Accession: ZDB-GENE-090313-50
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000008337	La	PF05383.17	2.9e-11	1	1
ENSXCOP00000008336	La	PF05383.17	3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000008441	-	2295	-	ENSXCOP00000008336	764 (aa)	-	-
ENSXCOT00000008442	-	2253	-	ENSXCOP00000008337	750 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000006387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000006387's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000006387	larp4aa	82	35.736	ENSXCOG00000019952	LARP4B	74	59.854

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000006387	larp4aa	89	52.941	ENSG00000161813	LARP4	99	56.086	Homo_sapiens
ENSXCOG00000006387	larp4aa	95	49.045	ENSAPOG00000021331	larp4ab	100	49.168	Acanthochromis_polyacanthus
ENSXCOG00000006387	larp4aa	100	81.211	ENSAPOG00000007142	larp4aa	100	81.088	Acanthochromis_polyacanthus
ENSXCOG00000006387	larp4aa	100	76.076	ENSACIG00000001198	larp4aa	100	77.848	Amphilophus_citrinellus
ENSXCOG00000006387	larp4aa	95	49.168	ENSAOCG00000006387	larp4ab	100	48.980	Amphiprion_ocellaris
ENSXCOG00000006387	larp4aa	100	81.404	ENSAOCG00000002408	larp4aa	100	80.542	Amphiprion_ocellaris
ENSXCOG00000006387	larp4aa	100	81.134	ENSAPEG00000019058	larp4aa	100	80.271	Amphiprion_percula
ENSXCOG00000006387	larp4aa	95	46.895	ENSATEG00000001018	larp4ab	100	46.125	Anabas_testudineus
ENSXCOG00000006387	larp4aa	100	78.473	ENSATEG00000020715	larp4aa	100	78.446	Anabas_testudineus
ENSXCOG00000006387	larp4aa	95	49.416	ENSAPLG00000013661	LARP4	99	50.324	Anas_platyrhynchos
ENSXCOG00000006387	larp4aa	95	48.958	ENSACAG00000017133	LARP4	96	48.182	Anolis_carolinensis
ENSXCOG00000006387	larp4aa	88	54.225	ENSANAG00000029342	LARP4	99	56.563	Aotus_nancymaae
ENSXCOG00000006387	larp4aa	100	77.289	ENSACLG00000002575	larp4aa	100	76.923	Astatotilapia_calliptera
ENSXCOG00000006387	larp4aa	100	49.017	ENSAMXG00000001515	larp4ab	100	52.632	Astyanax_mexicanus
ENSXCOG00000006387	larp4aa	100	62.575	ENSAMXG00000036493	larp4aa	100	62.470	Astyanax_mexicanus
ENSXCOG00000006387	larp4aa	95	48.391	ENSBTAG00000017164	LARP4	99	47.882	Bos_taurus
ENSXCOG00000006387	larp4aa	82	59.892	ENSCJAG00000021131	LARP4	99	56.086	Callithrix_jacchus
ENSXCOG00000006387	larp4aa	93	45.431	ENSCAFG00020014554	LARP4	99	55.477	Canis_lupus_dingo
ENSXCOG00000006387	larp4aa	95	47.876	ENSCHIG00000025965	LARP4	99	47.754	Capra_hircus
ENSXCOG00000006387	larp4aa	95	47.736	ENSTSYG00000004342	LARP4	99	56.563	Carlito_syrichta
ENSXCOG00000006387	larp4aa	94	38.679	ENSCAPG00000012942	LARP4	99	38.070	Cavia_aperea
ENSXCOG00000006387	larp4aa	95	44.243	ENSCPOG00000020519	LARP4	99	44.890	Cavia_porcellus
ENSXCOG00000006387	larp4aa	83	59.621	ENSCCAG00000024439	LARP4	99	55.952	Cebus_capucinus
ENSXCOG00000006387	larp4aa	95	47.686	ENSCATG00000044528	LARP4	99	49.476	Cercocebus_atys
ENSXCOG00000006387	larp4aa	95	46.710	ENSCLAG00000001829	LARP4	99	47.280	Chinchilla_lanigera
ENSXCOG00000006387	larp4aa	96	49.626	ENSCPBG00000019407	LARP4	90	50.127	Chrysemys_picta_bellii
ENSXCOG00000006387	larp4aa	89	53.287	ENSCANG00000029159	-	99	56.563	Colobus_angolensis_palliatus
ENSXCOG00000006387	larp4aa	95	45.419	ENSCANG00000033097	-	91	63.607	Colobus_angolensis_palliatus
ENSXCOG00000006387	larp4aa	95	47.089	ENSCGRG00001010818	Larp4	99	47.254	Cricetulus_griseus_chok1gshd
ENSXCOG00000006387	larp4aa	95	47.089	ENSCGRG00000009382	Larp4	100	47.254	Cricetulus_griseus_crigri
ENSXCOG00000006387	larp4aa	100	77.328	ENSCSEG00000001963	larp4aa	100	77.328	Cynoglossus_semilaevis
ENSXCOG00000006387	larp4aa	55	56.161	ENSCSEG00000003240	larp4ab	87	46.908	Cynoglossus_semilaevis
ENSXCOG00000006387	larp4aa	100	83.580	ENSCVAG00000005488	larp4aa	100	83.951	Cyprinodon_variegatus
ENSXCOG00000006387	larp4aa	95	49.542	ENSDARG00000074979	larp4ab	67	89.076	Danio_rerio
ENSXCOG00000006387	larp4aa	100	61.652	ENSDARG00000078401	larp4aa	100	61.747	Danio_rerio
ENSXCOG00000006387	larp4aa	57	86.667	ENSETEG00000011683	LARP4	56	86.667	Echinops_telfairi
ENSXCOG00000006387	larp4aa	57	41.164	ENSEBUG00000004426	LARP4	79	40.773	Eptatretus_burgeri
ENSXCOG00000006387	larp4aa	75	38.191	ENSEBUG00000010394	LARP4	88	38.966	Eptatretus_burgeri
ENSXCOG00000006387	larp4aa	95	46.194	ENSEASG00005004356	LARP4	100	53.419	Equus_asinus_asinus
ENSXCOG00000006387	larp4aa	95	48.387	ENSECAG00000012479	LARP4	99	49.443	Equus_caballus
ENSXCOG00000006387	larp4aa	55	85.470	ENSEEUG00000000316	LARP4	69	85.470	Erinaceus_europaeus
ENSXCOG00000006387	larp4aa	80	68.153	ENSELUG00000018650	larp4ab	94	67.089	Esox_lucius
ENSXCOG00000006387	larp4aa	100	59.486	ENSELUG00000000395	larp4aa	89	71.429	Esox_lucius
ENSXCOG00000006387	larp4aa	88	55.477	ENSFCAG00000031897	LARP4	98	60.054	Felis_catus
ENSXCOG00000006387	larp4aa	79	50.539	ENSFALG00000002114	LARP4	95	50.758	Ficedula_albicollis
ENSXCOG00000006387	larp4aa	100	83.107	ENSFHEG00000004338	larp4aa	100	82.861	Fundulus_heteroclitus
ENSXCOG00000006387	larp4aa	95	45.419	ENSFHEG00000013854	larp4ab	99	44.863	Fundulus_heteroclitus
ENSXCOG00000006387	larp4aa	100	68.136	ENSGMOG00000008246	larp4aa	100	67.965	Gadus_morhua
ENSXCOG00000006387	larp4aa	90	49.391	ENSGALG00000042122	LARP4	92	50.000	Gallus_gallus
ENSXCOG00000006387	larp4aa	95	46.465	ENSGAFG00000021777	larp4ab	99	45.478	Gambusia_affinis
ENSXCOG00000006387	larp4aa	95	47.733	ENSGACG00000000680	larp4ab	99	48.682	Gasterosteus_aculeatus
ENSXCOG00000006387	larp4aa	100	73.149	ENSGACG00000008381	larp4aa	98	79.778	Gasterosteus_aculeatus
ENSXCOG00000006387	larp4aa	95	50.000	ENSGAGG00000006969	LARP4	99	50.000	Gopherus_agassizii
ENSXCOG00000006387	larp4aa	86	56.226	ENSGGOG00000015230	LARP4	95	56.226	Gorilla_gorilla
ENSXCOG00000006387	larp4aa	100	77.045	ENSHBUG00000023074	larp4aa	100	76.679	Haplochromis_burtoni
ENSXCOG00000006387	larp4aa	86	49.240	ENSHGLG00000013875	-	97	48.476	Heterocephalus_glaber_female
ENSXCOG00000006387	larp4aa	95	46.615	ENSHGLG00100011678	-	99	45.550	Heterocephalus_glaber_male
ENSXCOG00000006387	larp4aa	100	71.712	ENSHCOG00000015951	larp4aa	100	71.588	Hippocampus_comes
ENSXCOG00000006387	larp4aa	95	45.747	ENSHCOG00000020857	larp4ab	100	45.490	Hippocampus_comes
ENSXCOG00000006387	larp4aa	95	47.587	ENSIPUG00000021659	larp4ab	99	47.154	Ictalurus_punctatus
ENSXCOG00000006387	larp4aa	100	61.145	ENSIPUG00000007514	larp4aa	100	61.632	Ictalurus_punctatus
ENSXCOG00000006387	larp4aa	95	47.954	ENSSTOG00000003553	LARP4	99	48.473	Ictidomys_tridecemlineatus
ENSXCOG00000006387	larp4aa	100	80.397	ENSKMAG00000006800	larp4aa	100	80.149	Kryptolebias_marmoratus
ENSXCOG00000006387	larp4aa	95	46.447	ENSKMAG00000018556	larp4ab	100	46.474	Kryptolebias_marmoratus
ENSXCOG00000006387	larp4aa	97	78.705	ENSLBEG00000014537	larp4aa	100	77.061	Labrus_bergylta
ENSXCOG00000006387	larp4aa	95	47.876	ENSLBEG00000019306	larp4ab	100	48.528	Labrus_bergylta
ENSXCOG00000006387	larp4aa	99	48.547	ENSLACG00000019090	LARP4	99	49.296	Latimeria_chalumnae
ENSXCOG00000006387	larp4aa	100	56.395	ENSLOCG00000007113	larp4ab	100	57.811	Lepisosteus_oculatus
ENSXCOG00000006387	larp4aa	85	48.056	ENSLAFG00000005160	LARP4	100	47.664	Loxodonta_africana
ENSXCOG00000006387	larp4aa	95	47.403	ENSMFAG00000043681	LARP4	99	56.563	Macaca_fascicularis
ENSXCOG00000006387	larp4aa	95	47.403	ENSMMUG00000008172	LARP4	99	56.981	Macaca_mulatta
ENSXCOG00000006387	larp4aa	94	47.114	ENSMNEG00000034602	LARP4	98	48.257	Macaca_nemestrina
ENSXCOG00000006387	larp4aa	82	43.216	ENSMNEG00000037799	-	96	43.216	Macaca_nemestrina
ENSXCOG00000006387	larp4aa	82	60.163	ENSMLEG00000039661	LARP4	99	56.563	Mandrillus_leucophaeus
ENSXCOG00000006387	larp4aa	100	80.713	ENSMAMG00000011206	larp4aa	100	79.607	Mastacembelus_armatus
ENSXCOG00000006387	larp4aa	95	49.161	ENSMAMG00000002616	larp4ab	100	49.032	Mastacembelus_armatus
ENSXCOG00000006387	larp4aa	100	77.534	ENSMZEG00005001813	larp4aa	100	77.167	Maylandia_zebra
ENSXCOG00000006387	larp4aa	90	48.435	ENSMGAG00000010598	LARP4	92	49.524	Meleagris_gallopavo
ENSXCOG00000006387	larp4aa	67	65.899	ENSMICG00000030156	-	89	62.778	Microcebus_murinus
ENSXCOG00000006387	larp4aa	80	70.330	ENSMICG00000012388	-	100	69.945	Microcebus_murinus
ENSXCOG00000006387	larp4aa	95	47.644	ENSMOCG00000020635	Larp4	99	47.974	Microtus_ochrogaster
ENSXCOG00000006387	larp4aa	95	46.184	ENSMMOG00000021861	larp4ab	92	55.952	Mola_mola
ENSXCOG00000006387	larp4aa	100	73.457	ENSMMOG00000004785	larp4aa	100	72.761	Mola_mola
ENSXCOG00000006387	larp4aa	71	61.076	MGP_CAROLIEiJ_G0020281	Larp4	84	60.952	Mus_caroli
ENSXCOG00000006387	larp4aa	95	46.076	ENSMUSG00000023025	Larp4	99	47.724	Mus_musculus
ENSXCOG00000006387	larp4aa	95	47.545	ENSMPUG00000008706	LARP4	96	48.082	Mustela_putorius_furo
ENSXCOG00000006387	larp4aa	100	76.923	ENSNBRG00000011292	larp4aa	100	76.190	Neolamprologus_brichardi
ENSXCOG00000006387	larp4aa	89	53.287	ENSNLEG00000017798	LARP4	99	56.325	Nomascus_leucogenys
ENSXCOG00000006387	larp4aa	95	46.875	ENSODEG00000009770	LARP4	100	45.918	Octodon_degus
ENSXCOG00000006387	larp4aa	100	77.307	ENSONIG00000011895	larp4aa	100	77.556	Oreochromis_niloticus
ENSXCOG00000006387	larp4aa	95	46.503	ENSONIG00000019124	larp4ab	99	45.524	Oreochromis_niloticus
ENSXCOG00000006387	larp4aa	62	54.269	ENSOANG00000004373	LARP4	92	54.269	Ornithorhynchus_anatinus
ENSXCOG00000006387	larp4aa	95	47.943	ENSOCUG00000026872	-	99	47.674	Oryctolagus_cuniculus
ENSXCOG00000006387	larp4aa	95	47.490	ENSOCUG00000021417	-	99	47.158	Oryctolagus_cuniculus
ENSXCOG00000006387	larp4aa	100	72.346	ENSORLG00000006758	larp4aa	100	72.457	Oryzias_latipes
ENSXCOG00000006387	larp4aa	100	72.469	ENSORLG00020010258	larp4aa	100	72.649	Oryzias_latipes_hni
ENSXCOG00000006387	larp4aa	100	71.747	ENSORLG00015002292	larp4aa	100	71.960	Oryzias_latipes_hsok
ENSXCOG00000006387	larp4aa	100	71.627	ENSOMEG00000019749	larp4aa	96	79.592	Oryzias_melastigma
ENSXCOG00000006387	larp4aa	63	50.000	ENSOGAG00000001415	LARP4	99	50.755	Otolemur_garnettii
ENSXCOG00000006387	larp4aa	95	48.454	ENSOARG00000017702	LARP4	99	47.882	Ovis_aries
ENSXCOG00000006387	larp4aa	86	53.289	ENSPPAG00000035100	LARP4	99	55.189	Pan_paniscus
ENSXCOG00000006387	larp4aa	82	60.326	ENSPPRG00000004522	LARP4	98	60.054	Panthera_pardus
ENSXCOG00000006387	larp4aa	82	60.326	ENSPTIG00000015617	LARP4	98	60.054	Panthera_tigris_altaica
ENSXCOG00000006387	larp4aa	89	52.941	ENSPTRG00000004935	LARP4	99	56.086	Pan_troglodytes
ENSXCOG00000006387	larp4aa	89	53.633	ENSPANG00000022964	LARP4	99	56.802	Papio_anubis
ENSXCOG00000006387	larp4aa	100	57.108	ENSPKIG00000005950	larp4ab	100	57.246	Paramormyrops_kingsleyae
ENSXCOG00000006387	larp4aa	96	49.052	ENSPSIG00000015867	LARP4	100	48.799	Pelodiscus_sinensis
ENSXCOG00000006387	larp4aa	72	37.852	ENSPMAG00000002788	LARP4	97	40.108	Petromyzon_marinus
ENSXCOG00000006387	larp4aa	96	47.959	ENSPCIG00000000384	LARP4	99	48.187	Phascolarctos_cinereus
ENSXCOG00000006387	larp4aa	100	92.020	ENSPFOG00000013148	larp4aa	100	92.020	Poecilia_formosa
ENSXCOG00000006387	larp4aa	95	47.266	ENSPFOG00000009764	larp4ab	99	43.884	Poecilia_formosa
ENSXCOG00000006387	larp4aa	95	47.451	ENSPLAG00000008502	larp4ab	99	44.010	Poecilia_latipinna
ENSXCOG00000006387	larp4aa	100	92.005	ENSPLAG00000013626	larp4aa	100	92.005	Poecilia_latipinna
ENSXCOG00000006387	larp4aa	100	91.771	ENSPMEG00000014271	larp4aa	100	91.771	Poecilia_mexicana
ENSXCOG00000006387	larp4aa	95	45.823	ENSPMEG00000002720	larp4ab	99	44.066	Poecilia_mexicana
ENSXCOG00000006387	larp4aa	100	92.005	ENSPREG00000022597	larp4aa	100	92.005	Poecilia_reticulata
ENSXCOG00000006387	larp4aa	62	52.190	ENSPPYG00000004512	-	98	53.333	Pongo_abelii
ENSXCOG00000006387	larp4aa	76	64.727	ENSPCAG00000003671	LARP4	80	64.727	Procavia_capensis
ENSXCOG00000006387	larp4aa	82	59.838	ENSPCOG00000026291	LARP4	99	58.427	Propithecus_coquereli
ENSXCOG00000006387	larp4aa	100	77.289	ENSPNYG00000022265	larp4aa	100	76.923	Pundamilia_nyererei
ENSXCOG00000006387	larp4aa	96	60.224	ENSPNAG00000024770	larp4aa	99	59.926	Pygocentrus_nattereri
ENSXCOG00000006387	larp4aa	95	54.211	ENSPNAG00000014478	larp4ab	99	53.038	Pygocentrus_nattereri
ENSXCOG00000006387	larp4aa	81	52.731	ENSRBIG00000038857	-	94	56.716	Rhinopithecus_bieti
ENSXCOG00000006387	larp4aa	86	57.265	ENSRBIG00000036890	-	99	57.265	Rhinopithecus_bieti
ENSXCOG00000006387	larp4aa	95	46.174	ENSRROG00000025487	-	99	57.265	Rhinopithecus_roxellana
ENSXCOG00000006387	larp4aa	89	53.287	ENSRROG00000042764	-	99	56.563	Rhinopithecus_roxellana
ENSXCOG00000006387	larp4aa	95	46.809	ENSSBOG00000026650	LARP4	99	55.847	Saimiri_boliviensis_boliviensis
ENSXCOG00000006387	larp4aa	99	59.484	ENSSFOG00015003868	larp4aa	100	57.875	Scleropages_formosus
ENSXCOG00000006387	larp4aa	100	56.740	ENSSFOG00015014096	larp4ab	100	56.985	Scleropages_formosus
ENSXCOG00000006387	larp4aa	100	78.256	ENSSMAG00000019473	larp4aa	100	78.941	Scophthalmus_maximus
ENSXCOG00000006387	larp4aa	95	48.404	ENSSMAG00000002838	larp4ab	100	48.285	Scophthalmus_maximus
ENSXCOG00000006387	larp4aa	95	48.608	ENSSDUG00000006655	larp4ab	100	48.250	Seriola_dumerili
ENSXCOG00000006387	larp4aa	100	80.123	ENSSDUG00000010621	larp4aa	100	79.877	Seriola_dumerili
ENSXCOG00000006387	larp4aa	100	80.491	ENSSLDG00000004942	larp4aa	100	79.509	Seriola_lalandi_dorsalis
ENSXCOG00000006387	larp4aa	95	48.116	ENSSLDG00000001791	larp4ab	100	48.070	Seriola_lalandi_dorsalis
ENSXCOG00000006387	larp4aa	67	62.745	ENSSARG00000012469	LARP4	89	51.268	Sorex_araneus
ENSXCOG00000006387	larp4aa	90	46.438	ENSSPUG00000016552	LARP4	92	46.970	Sphenodon_punctatus
ENSXCOG00000006387	larp4aa	95	49.356	ENSSPAG00000002172	larp4ab	100	48.840	Stegastes_partitus
ENSXCOG00000006387	larp4aa	90	90.909	ENSSPAG00000007222	larp4aa	97	87.879	Stegastes_partitus
ENSXCOG00000006387	larp4aa	95	46.076	ENSSSCG00000028516	LARP4	99	48.889	Sus_scrofa
ENSXCOG00000006387	larp4aa	95	48.307	ENSTGUG00000003479	LARP4	99	49.418	Taeniopygia_guttata
ENSXCOG00000006387	larp4aa	95	44.968	ENSTRUG00000007206	larp4ab	100	44.061	Takifugu_rubripes
ENSXCOG00000006387	larp4aa	95	70.487	ENSTNIG00000015109	larp4aa	99	70.039	Tetraodon_nigroviridis
ENSXCOG00000006387	larp4aa	95	43.646	ENSTNIG00000014571	larp4ab	100	42.375	Tetraodon_nigroviridis
ENSXCOG00000006387	larp4aa	79	50.585	ENSTBEG00000005167	LARP4	84	50.292	Tupaia_belangeri
ENSXCOG00000006387	larp4aa	95	47.798	ENSTTRG00000003764	LARP4	99	47.150	Tursiops_truncatus
ENSXCOG00000006387	larp4aa	95	48.057	ENSUMAG00000008473	LARP4	99	48.196	Ursus_maritimus
ENSXCOG00000006387	larp4aa	88	55.477	ENSVVUG00000024717	LARP4	99	55.477	Vulpes_vulpes
ENSXCOG00000006387	larp4aa	89	51.387	ENSXETG00000007283	larp4	93	50.801	Xenopus_tropicalis
ENSXCOG00000006387	larp4aa	100	93.125	ENSXMAG00000010519	larp4aa	100	93.125	Xiphophorus_maculatus
ENSXCOG00000006387	larp4aa	95	47.135	ENSXMAG00000002156	larp4ab	99	45.796	Xiphophorus_maculatus