EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000006412 (Gene tree)
Gene ID: -
Gene Symbol: tdrd1
Alias: im:7155161
Full Name: tudor domain containing 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 11700 bases
Position: chrKQ557202.1:18780555-18792254
Accession: ZDB-GENE-070803-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000008371	TUDOR	PF00567.24	6.4e-90	1	4
ENSXCOP00000008371	TUDOR	PF00567.24	6.4e-90	2	4
ENSXCOP00000008371	TUDOR	PF00567.24	6.4e-90	3	4
ENSXCOP00000008371	TUDOR	PF00567.24	6.4e-90	4	4
ENSXCOP00000008368	TUDOR	PF00567.24	8.1e-89	1	4
ENSXCOP00000008368	TUDOR	PF00567.24	8.1e-89	2	4
ENSXCOP00000008368	TUDOR	PF00567.24	8.1e-89	3	4
ENSXCOP00000008368	TUDOR	PF00567.24	8.1e-89	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000008474	-	2595	-	ENSXCOP00000008368	864 (aa)	-	-
ENSXCOT00000008477	-	2580	-	ENSXCOP00000008371	859 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000006412's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000006412's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000006412	tdrd1	97	36.100	ENSG00000095627	TDRD1	71	36.100	Homo_sapiens
ENSXCOG00000006412	tdrd1	100	57.877	ENSAPOG00000023199	tdrd1	86	57.989	Acanthochromis_polyacanthus
ENSXCOG00000006412	tdrd1	90	35.232	ENSAMEG00000015182	TDRD1	74	35.232	Ailuropoda_melanoleuca
ENSXCOG00000006412	tdrd1	100	60.476	ENSACIG00000010576	tdrd1	85	60.403	Amphilophus_citrinellus
ENSXCOG00000006412	tdrd1	98	67.584	ENSAOCG00000007059	tdrd1	87	55.258	Amphiprion_ocellaris
ENSXCOG00000006412	tdrd1	99	58.974	ENSAPEG00000017049	tdrd1	85	58.974	Amphiprion_percula
ENSXCOG00000006412	tdrd1	98	59.200	ENSATEG00000021627	tdrd1	83	59.336	Anabas_testudineus
ENSXCOG00000006412	tdrd1	93	33.599	ENSAPLG00000012609	TDRD1	82	33.645	Anas_platyrhynchos
ENSXCOG00000006412	tdrd1	93	32.450	ENSACAG00000009854	TDRD1	71	32.450	Anolis_carolinensis
ENSXCOG00000006412	tdrd1	88	36.048	ENSANAG00000035710	TDRD1	72	36.085	Aotus_nancymaae
ENSXCOG00000006412	tdrd1	98	58.749	ENSACLG00000014107	tdrd1	85	55.074	Astatotilapia_calliptera
ENSXCOG00000006412	tdrd1	92	47.596	ENSAMXG00000015146	tdrd1	75	47.596	Astyanax_mexicanus
ENSXCOG00000006412	tdrd1	88	34.256	ENSBTAG00000006855	TDRD1	72	34.350	Bos_taurus
ENSXCOG00000006412	tdrd1	88	35.609	ENSCJAG00000019270	TDRD1	73	35.648	Callithrix_jacchus
ENSXCOG00000006412	tdrd1	94	34.300	ENSCAFG00000011266	TDRD1	79	34.383	Canis_familiaris
ENSXCOG00000006412	tdrd1	94	34.300	ENSCAFG00020012373	TDRD1	79	34.383	Canis_lupus_dingo
ENSXCOG00000006412	tdrd1	88	35.271	ENSCHIG00000012766	TDRD1	72	35.395	Capra_hircus
ENSXCOG00000006412	tdrd1	93	33.210	ENSTSYG00000004935	TDRD1	77	34.538	Carlito_syrichta
ENSXCOG00000006412	tdrd1	87	35.007	ENSCPOG00000004190	TDRD1	73	35.239	Cavia_porcellus
ENSXCOG00000006412	tdrd1	87	36.000	ENSCCAG00000027375	TDRD1	71	35.963	Cebus_capucinus
ENSXCOG00000006412	tdrd1	97	35.847	ENSCATG00000035999	TDRD1	73	34.559	Cercocebus_atys
ENSXCOG00000006412	tdrd1	96	33.822	ENSCLAG00000003935	TDRD1	77	33.662	Chinchilla_lanigera
ENSXCOG00000006412	tdrd1	93	34.592	ENSCSAG00000005071	TDRD1	71	34.681	Chlorocebus_sabaeus
ENSXCOG00000006412	tdrd1	96	45.385	ENSCHOG00000001690	TDRD1	56	45.385	Choloepus_hoffmanni
ENSXCOG00000006412	tdrd1	95	34.809	ENSCPBG00000003780	TDRD1	74	34.809	Chrysemys_picta_bellii
ENSXCOG00000006412	tdrd1	96	36.048	ENSCANG00000035172	TDRD1	71	36.096	Colobus_angolensis_palliatus
ENSXCOG00000006412	tdrd1	88	35.498	ENSCGRG00001004632	Tdrd1	75	35.498	Cricetulus_griseus_chok1gshd
ENSXCOG00000006412	tdrd1	91	34.336	ENSCGRG00000004981	Tdrd1	74	34.336	Cricetulus_griseus_crigri
ENSXCOG00000006412	tdrd1	94	52.083	ENSCSEG00000006983	tdrd1	84	50.946	Cynoglossus_semilaevis
ENSXCOG00000006412	tdrd1	98	63.306	ENSCVAG00000020980	tdrd1	93	63.306	Cyprinodon_variegatus
ENSXCOG00000006412	tdrd1	94	46.231	ENSDARG00000007465	tdrd1	74	46.366	Danio_rerio
ENSXCOG00000006412	tdrd1	96	36.400	ENSDNOG00000012114	TDRD1	67	36.533	Dasypus_novemcinctus
ENSXCOG00000006412	tdrd1	93	32.847	ENSDORG00000009986	Tdrd1	75	33.252	Dipodomys_ordii
ENSXCOG00000006412	tdrd1	90	33.693	ENSETEG00000020143	TDRD1	62	33.693	Echinops_telfairi
ENSXCOG00000006412	tdrd1	54	34.677	ENSEBUG00000003519	-	94	34.677	Eptatretus_burgeri
ENSXCOG00000006412	tdrd1	96	33.601	ENSEASG00005014802	TDRD1	78	34.455	Equus_asinus_asinus
ENSXCOG00000006412	tdrd1	96	34.724	ENSECAG00000009748	TDRD1	69	42.537	Equus_caballus
ENSXCOG00000006412	tdrd1	90	34.610	ENSEEUG00000010076	TDRD1	77	34.707	Erinaceus_europaeus
ENSXCOG00000006412	tdrd1	97	45.940	ENSELUG00000024364	tdrd1	81	45.940	Esox_lucius
ENSXCOG00000006412	tdrd1	94	33.657	ENSFCAG00000000632	TDRD1	73	33.779	Felis_catus
ENSXCOG00000006412	tdrd1	90	32.969	ENSFALG00000002237	TDRD1	87	33.073	Ficedula_albicollis
ENSXCOG00000006412	tdrd1	94	33.252	ENSFDAG00000013225	TDRD1	74	33.415	Fukomys_damarensis
ENSXCOG00000006412	tdrd1	98	47.189	ENSFHEG00000009203	tdrd1	88	46.777	Fundulus_heteroclitus
ENSXCOG00000006412	tdrd1	87	46.368	ENSGMOG00000016797	-	67	46.739	Gadus_morhua
ENSXCOG00000006412	tdrd1	92	30.760	ENSGALG00000046180	TDRD1	77	30.760	Gallus_gallus
ENSXCOG00000006412	tdrd1	98	91.263	ENSGAFG00000002668	tdrd1	89	87.118	Gambusia_affinis
ENSXCOG00000006412	tdrd1	92	57.201	ENSGACG00000006590	tdrd1	98	57.337	Gasterosteus_aculeatus
ENSXCOG00000006412	tdrd1	97	36.100	ENSGGOG00000004250	TDRD1	71	36.100	Gorilla_gorilla
ENSXCOG00000006412	tdrd1	100	57.629	ENSHBUG00000005216	tdrd1	93	57.629	Haplochromis_burtoni
ENSXCOG00000006412	tdrd1	96	31.669	ENSHGLG00000010877	TDRD1	73	31.669	Heterocephalus_glaber_female
ENSXCOG00000006412	tdrd1	96	34.600	ENSHGLG00100013857	TDRD1	75	34.600	Heterocephalus_glaber_male
ENSXCOG00000006412	tdrd1	93	47.217	ENSHCOG00000002840	tdrd1	73	47.302	Hippocampus_comes
ENSXCOG00000006412	tdrd1	100	45.993	ENSIPUG00000017232	tdrd1	85	45.993	Ictalurus_punctatus
ENSXCOG00000006412	tdrd1	88	35.979	ENSSTOG00000003221	TDRD1	76	35.942	Ictidomys_tridecemlineatus
ENSXCOG00000006412	tdrd1	91	34.777	ENSJJAG00000014720	Tdrd1	72	34.901	Jaculus_jaculus
ENSXCOG00000006412	tdrd1	98	61.921	ENSKMAG00000018558	tdrd1	94	61.921	Kryptolebias_marmoratus
ENSXCOG00000006412	tdrd1	98	59.475	ENSLBEG00000004161	tdrd1	85	56.059	Labrus_bergylta
ENSXCOG00000006412	tdrd1	93	33.698	ENSLACG00000011559	TDRD1	76	33.698	Latimeria_chalumnae
ENSXCOG00000006412	tdrd1	93	41.813	ENSLOCG00000012030	tdrd1	93	41.813	Lepisosteus_oculatus
ENSXCOG00000006412	tdrd1	94	35.340	ENSLAFG00000011575	TDRD1	85	35.340	Loxodonta_africana
ENSXCOG00000006412	tdrd1	97	35.847	ENSMFAG00000043487	TDRD1	71	35.952	Macaca_fascicularis
ENSXCOG00000006412	tdrd1	97	35.847	ENSMMUG00000022517	TDRD1	71	35.952	Macaca_mulatta
ENSXCOG00000006412	tdrd1	99	35.847	ENSMNEG00000031108	TDRD1	71	35.952	Macaca_nemestrina
ENSXCOG00000006412	tdrd1	97	35.714	ENSMLEG00000032281	TDRD1	71	35.819	Mandrillus_leucophaeus
ENSXCOG00000006412	tdrd1	99	59.301	ENSMAMG00000015287	tdrd1	85	60.943	Mastacembelus_armatus
ENSXCOG00000006412	tdrd1	98	58.749	ENSMZEG00005025315	tdrd1	85	54.719	Maylandia_zebra
ENSXCOG00000006412	tdrd1	92	30.846	ENSMGAG00000011067	TDRD1	90	30.952	Meleagris_gallopavo
ENSXCOG00000006412	tdrd1	87	36.170	ENSMAUG00000012164	Tdrd1	77	36.170	Mesocricetus_auratus
ENSXCOG00000006412	tdrd1	88	36.280	ENSMICG00000016190	TDRD1	74	36.280	Microcebus_murinus
ENSXCOG00000006412	tdrd1	92	33.499	ENSMOCG00000022360	Tdrd1	75	33.748	Microtus_ochrogaster
ENSXCOG00000006412	tdrd1	99	55.763	ENSMMOG00000014068	tdrd1	86	55.763	Mola_mola
ENSXCOG00000006412	tdrd1	92	32.797	ENSMODG00000009788	TDRD1	77	32.880	Monodelphis_domestica
ENSXCOG00000006412	tdrd1	100	55.131	ENSMALG00000022115	tdrd1	88	55.131	Monopterus_albus
ENSXCOG00000006412	tdrd1	91	34.207	MGP_CAROLIEiJ_G0023095	Tdrd1	72	34.332	Mus_caroli
ENSXCOG00000006412	tdrd1	91	34.539	ENSMUSG00000025081	Tdrd1	74	34.663	Mus_musculus
ENSXCOG00000006412	tdrd1	92	33.625	MGP_PahariEiJ_G0014583	Tdrd1	77	33.750	Mus_pahari
ENSXCOG00000006412	tdrd1	91	34.625	MGP_SPRETEiJ_G0024016	Tdrd1	72	34.750	Mus_spretus
ENSXCOG00000006412	tdrd1	90	36.303	ENSMPUG00000001987	TDRD1	74	36.303	Mustela_putorius_furo
ENSXCOG00000006412	tdrd1	88	35.153	ENSNGAG00000015231	Tdrd1	75	35.247	Nannospalax_galili
ENSXCOG00000006412	tdrd1	100	57.680	ENSNBRG00000017920	tdrd1	86	57.680	Neolamprologus_brichardi
ENSXCOG00000006412	tdrd1	96	34.742	ENSNLEG00000016228	TDRD1	72	34.742	Nomascus_leucogenys
ENSXCOG00000006412	tdrd1	96	30.854	ENSMEUG00000007717	TDRD1	74	30.855	Notamacropus_eugenii
ENSXCOG00000006412	tdrd1	94	34.310	ENSOPRG00000009180	TDRD1	67	34.310	Ochotona_princeps
ENSXCOG00000006412	tdrd1	92	33.875	ENSODEG00000011965	TDRD1	74	33.875	Octodon_degus
ENSXCOG00000006412	tdrd1	97	60.191	ENSONIG00000016382	tdrd1	88	57.174	Oreochromis_niloticus
ENSXCOG00000006412	tdrd1	93	33.700	ENSOANG00000001562	TDRD1	78	33.863	Ornithorhynchus_anatinus
ENSXCOG00000006412	tdrd1	93	33.735	ENSOCUG00000025327	TDRD1	80	33.735	Oryctolagus_cuniculus
ENSXCOG00000006412	tdrd1	99	53.599	ENSORLG00000004833	tdrd1	85	53.599	Oryzias_latipes
ENSXCOG00000006412	tdrd1	99	54.743	ENSORLG00020019231	tdrd1	83	56.967	Oryzias_latipes_hni
ENSXCOG00000006412	tdrd1	97	56.877	ENSORLG00015017184	tdrd1	75	56.877	Oryzias_latipes_hsok
ENSXCOG00000006412	tdrd1	99	54.535	ENSOMEG00000023637	tdrd1	79	54.640	Oryzias_melastigma
ENSXCOG00000006412	tdrd1	96	35.564	ENSOGAG00000001370	TDRD1	74	35.667	Otolemur_garnettii
ENSXCOG00000006412	tdrd1	88	34.948	ENSOARG00000014200	-	72	35.132	Ovis_aries
ENSXCOG00000006412	tdrd1	97	36.100	ENSPPAG00000041621	TDRD1	71	36.100	Pan_paniscus
ENSXCOG00000006412	tdrd1	94	33.536	ENSPPRG00000000191	TDRD1	73	33.657	Panthera_pardus
ENSXCOG00000006412	tdrd1	94	33.657	ENSPTIG00000010264	TDRD1	74	33.779	Panthera_tigris_altaica
ENSXCOG00000006412	tdrd1	97	36.100	ENSPTRG00000002958	TDRD1	71	36.100	Pan_troglodytes
ENSXCOG00000006412	tdrd1	97	35.714	ENSPANG00000020752	TDRD1	75	34.303	Papio_anubis
ENSXCOG00000006412	tdrd1	98	42.191	ENSPKIG00000010586	tdrd1	78	42.535	Paramormyrops_kingsleyae
ENSXCOG00000006412	tdrd1	94	35.027	ENSPSIG00000014655	TDRD1	66	35.121	Pelodiscus_sinensis
ENSXCOG00000006412	tdrd1	90	51.293	ENSPMGG00000018890	tdrd1	88	51.565	Periophthalmus_magnuspinnatus
ENSXCOG00000006412	tdrd1	92	35.222	ENSPEMG00000004582	Tdrd1	79	35.018	Peromyscus_maniculatus_bairdii
ENSXCOG00000006412	tdrd1	96	34.048	ENSPCIG00000009739	TDRD1	77	32.718	Phascolarctos_cinereus
ENSXCOG00000006412	tdrd1	98	90.201	ENSPFOG00000002145	tdrd1	91	90.201	Poecilia_formosa
ENSXCOG00000006412	tdrd1	98	89.835	ENSPLAG00000010241	tdrd1	84	89.835	Poecilia_latipinna
ENSXCOG00000006412	tdrd1	98	87.485	ENSPMEG00000021893	tdrd1	84	87.485	Poecilia_mexicana
ENSXCOG00000006412	tdrd1	98	91.027	ENSPREG00000022663	tdrd1	86	85.900	Poecilia_reticulata
ENSXCOG00000006412	tdrd1	93	33.738	ENSPPYG00000002671	TDRD1	77	33.738	Pongo_abelii
ENSXCOG00000006412	tdrd1	94	32.899	ENSPCAG00000006692	TDRD1	62	32.899	Procavia_capensis
ENSXCOG00000006412	tdrd1	88	35.217	ENSPCOG00000026619	TDRD1	71	35.217	Propithecus_coquereli
ENSXCOG00000006412	tdrd1	96	35.600	ENSPVAG00000003055	TDRD1	72	35.600	Pteropus_vampyrus
ENSXCOG00000006412	tdrd1	98	59.096	ENSPNYG00000001706	tdrd1	85	56.757	Pundamilia_nyererei
ENSXCOG00000006412	tdrd1	92	48.306	ENSPNAG00000005831	tdrd1	78	48.500	Pygocentrus_nattereri
ENSXCOG00000006412	tdrd1	91	34.496	ENSRNOG00000017064	Tdrd1	75	34.496	Rattus_norvegicus
ENSXCOG00000006412	tdrd1	96	35.952	ENSRBIG00000029668	TDRD1	73	35.952	Rhinopithecus_bieti
ENSXCOG00000006412	tdrd1	92	35.915	ENSRROG00000043379	TDRD1	71	35.915	Rhinopithecus_roxellana
ENSXCOG00000006412	tdrd1	87	36.000	ENSSBOG00000023561	TDRD1	73	36.000	Saimiri_boliviensis_boliviensis
ENSXCOG00000006412	tdrd1	99	33.498	ENSSHAG00000014311	TDRD1	79	33.498	Sarcophilus_harrisii
ENSXCOG00000006412	tdrd1	98	40.930	ENSSFOG00015022020	tdrd1	82	41.472	Scleropages_formosus
ENSXCOG00000006412	tdrd1	99	58.352	ENSSMAG00000019271	tdrd1	85	58.239	Scophthalmus_maximus
ENSXCOG00000006412	tdrd1	94	60.890	ENSSDUG00000022012	tdrd1	83	61.158	Seriola_dumerili
ENSXCOG00000006412	tdrd1	94	60.943	ENSSLDG00000006423	tdrd1	83	60.943	Seriola_lalandi_dorsalis
ENSXCOG00000006412	tdrd1	90	37.413	ENSSARG00000008828	TDRD1	51	37.696	Sorex_araneus
ENSXCOG00000006412	tdrd1	90	33.778	ENSSPUG00000005015	TDRD1	80	33.778	Sphenodon_punctatus
ENSXCOG00000006412	tdrd1	100	58.150	ENSSPAG00000018805	tdrd1	87	58.150	Stegastes_partitus
ENSXCOG00000006412	tdrd1	94	33.861	ENSSSCG00000021075	TDRD1	74	33.861	Sus_scrofa
ENSXCOG00000006412	tdrd1	90	34.169	ENSTGUG00000010905	TDRD1	87	34.434	Taeniopygia_guttata
ENSXCOG00000006412	tdrd1	98	54.094	ENSTRUG00000012142	tdrd1	82	54.545	Takifugu_rubripes
ENSXCOG00000006412	tdrd1	99	44.262	ENSTNIG00000018898	tdrd1	88	44.459	Tetraodon_nigroviridis
ENSXCOG00000006412	tdrd1	94	37.538	ENSTBEG00000014417	-	73	33.778	Tupaia_belangeri
ENSXCOG00000006412	tdrd1	94	31.380	ENSTTRG00000010147	TDRD1	72	31.547	Tursiops_truncatus
ENSXCOG00000006412	tdrd1	90	34.927	ENSUAMG00000009025	TDRD1	75	33.457	Ursus_americanus
ENSXCOG00000006412	tdrd1	90	35.060	ENSUMAG00000000705	TDRD1	74	33.581	Ursus_maritimus
ENSXCOG00000006412	tdrd1	88	35.867	ENSVPAG00000004000	TDRD1	72	35.867	Vicugna_pacos
ENSXCOG00000006412	tdrd1	94	34.383	ENSVVUG00000009750	TDRD1	79	32.688	Vulpes_vulpes
ENSXCOG00000006412	tdrd1	100	99.769	ENSXMAG00000008104	tdrd1	86	99.769	Xiphophorus_maculatus