EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000006553 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
7914 bases
Position
chrKQ557225.1:38240636-38248549
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000008563zf-C2H2PF00096.261.4e-3517
ENSXCOP00000008563zf-C2H2PF00096.261.4e-3527
ENSXCOP00000008563zf-C2H2PF00096.261.4e-3537
ENSXCOP00000008563zf-C2H2PF00096.261.4e-3547
ENSXCOP00000008563zf-C2H2PF00096.261.4e-3557
ENSXCOP00000008563zf-C2H2PF00096.261.4e-3567
ENSXCOP00000008563zf-C2H2PF00096.261.4e-3577
ENSXCOP00000008563zf-metPF12874.71.3e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000008669-918-ENSXCOP00000008563305 (aa)--
Gene Model
Click here to download ENSXCOG00000006553's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000006553's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000006553-8445.570ENSXCOG00000009674-7045.570
ENSXCOG00000006553-8855.319ENSXCOG00000006614-8855.319
ENSXCOG00000006553-9543.359ENSXCOG00000012921-9743.359
ENSXCOG00000006553-8654.211ENSXCOG00000012924-9259.429
ENSXCOG00000006553-9650.350ENSXCOG00000010567-9745.217
ENSXCOG00000006553-9251.020ENSXCOG00000019457-9351.613
ENSXCOG00000006553-9543.333ENSXCOG00000003472-9643.333
ENSXCOG00000006553-8540.426ENSXCOG00000009668-6840.426
ENSXCOG00000006553-8649.107ENSXCOG00000010950si:dkey-210j14.37249.107
ENSXCOG00000006553-9641.967ENSXCOG00000010488-8641.967
ENSXCOG00000006553-9550.000ENSXCOG00000007979-8150.000
ENSXCOG00000006553-9150.485ENSXCOG00000009186-8950.485
ENSXCOG00000006553-8166.667ENSXCOG00000016589-9566.667
ENSXCOG00000006553-8641.346ENSXCOG00000020769-8241.346
ENSXCOG00000006553-8952.652ENSXCOG00000013004-7452.652
ENSXCOG00000006553-8147.059ENSXCOG00000014363-6147.059
ENSXCOG00000006553-8450.218ENSXCOG00000014361-6150.218
ENSXCOG00000006553-8548.193ENSXCOG00000003896-6048.193
ENSXCOG00000006553-9249.339ENSXCOG00000016307-9547.598
ENSXCOG00000006553-9645.000ENSXCOG00000003493-8245.000
ENSXCOG00000006553-8550.000ENSXCOG00000003499-5350.000
ENSXCOG00000006553-9140.161ENSXCOG00000013787-6740.161
ENSXCOG00000006553-8647.024ENSXCOG00000010259-5547.024
ENSXCOG00000006553-8650.667ENSXCOG00000011372-6250.667
ENSXCOG00000006553-9549.383ENSXCOG00000007981-9748.810
ENSXCOG00000006553-9554.468ENSXCOG00000001116-9953.462
ENSXCOG00000006553-8854.505ENSXCOG00000017328-9054.505
ENSXCOG00000006553-9338.636ENSXCOG00000009794-6743.373
ENSXCOG00000006553-9547.475ENSXCOG00000002857-9550.000
ENSXCOG00000006553-9048.182ENSXCOG00000007396-8748.182
ENSXCOG00000006553-9448.927ENSXCOG00000007376-9348.927
ENSXCOG00000006553-9349.721ENSXCOG00000007957-9449.275
ENSXCOG00000006553-9246.743ENSXCOG00000008116-9745.486
ENSXCOG00000006553-8739.407ENSXCOG00000013870-7239.407
ENSXCOG00000006553-9244.509ENSXCOG00000009798-7144.509
ENSXCOG00000006553-9546.809ENSXCOG00000009777-8346.809
ENSXCOG00000006553-8441.964ENSXCOG00000009772-8339.181
ENSXCOG00000006553-9960.577ENSXCOG00000019443-9654.245
ENSXCOG00000006553-8539.189ENSXCOG00000003441-5938.494
ENSXCOG00000006553-8542.017ENSXCOG00000002714-9242.017
ENSXCOG00000006553-8840.909ENSXCOG00000019675scrt1b5640.909
ENSXCOG00000006553-9638.732ENSXCOG00000013306-8238.732
ENSXCOG00000006553-9451.698ENSXCOG00000015441-9451.698
ENSXCOG00000006553-9148.673ENSXCOG00000007945-9548.673
ENSXCOG00000006553-8644.444ENSXCOG00000007076-9944.444
ENSXCOG00000006553-8547.297ENSXCOG00000010948-8447.297
ENSXCOG00000006553-9554.864ENSXCOG00000011725-9954.864
ENSXCOG00000006553-8552.486ENSXCOG00000008083-9552.486
ENSXCOG00000006553-8547.436ENSXCOG00000003438-7247.436
ENSXCOG00000006553-8649.102ENSXCOG00000003431-8848.810
ENSXCOG00000006553-8641.270ENSXCOG00000003435-8841.270
ENSXCOG00000006553-8753.101ENSXCOG00000002473-8953.101
ENSXCOG00000006553-9548.659ENSXCOG00000007406-9948.659
ENSXCOG00000006553-9539.286ENSXCOG00000009785-8039.286
ENSXCOG00000006553-9651.440ENSXCOG00000010507-6451.440
ENSXCOG00000006553-8537.569ENSXCOG00000003001-9537.569
ENSXCOG00000006553-9352.212ENSXCOG00000019492-9350.213
ENSXCOG00000006553-8841.475ENSXCOG00000009992zbtb47b8241.475
ENSXCOG00000006553-9547.279ENSXCOG00000001200-9747.279
ENSXCOG00000006553-9146.809ENSXCOG00000009781-7646.809
ENSXCOG00000006553-8644.298ENSXCOG00000017871zgc:1133436644.298
ENSXCOG00000006553-8542.986ENSXCOG00000009597ZNF3198642.986
ENSXCOG00000006553-8647.525ENSXCOG00000005697-9347.525
ENSXCOG00000006553-9051.341ENSXCOG00000016860-9951.341
ENSXCOG00000006553-8138.971ENSXCOG00000015084snai25238.971
ENSXCOG00000006553-9742.532ENSXCOG00000007937-8842.532
ENSXCOG00000006553-8441.453ENSXCOG00000015947-9241.453
ENSXCOG00000006553-9544.954ENSXCOG00000009665-8944.954
ENSXCOG00000006553-9349.215ENSXCOG00000010576-8649.215
ENSXCOG00000006553-8747.087ENSXCOG00000019382-7647.087
ENSXCOG00000006553-9434.252ENSXCOG00000019149znf5268334.252
ENSXCOG00000006553-9438.596ENSXCOG00000009768-7438.596
ENSXCOG00000006553-8645.690ENSXCOG00000003468-7945.703
ENSXCOG00000006553-8140.541ENSXCOG00000008003-5340.541
ENSXCOG00000006553-8633.077ENSXCOG00000000036znf3416033.077
ENSXCOG00000006553-8838.806ENSXCOG00000019861-5438.806
ENSXCOG00000006553-9753.077ENSXCOG00000007368-9553.077
ENSXCOG00000006553-8748.792ENSXCOG00000007941-9348.792
ENSXCOG00000006553-7243.056ENSXCOG00000018315-9143.056
ENSXCOG00000006553-8746.479ENSXCOG00000020768-7646.479
ENSXCOG00000006553-8243.820ENSXCOG00000013213-5443.820
ENSXCOG00000006553-8647.876ENSXCOG00000019377-9347.876
ENSXCOG00000006553-8444.800ENSXCOG00000007987-7944.800
ENSXCOG00000006553-9054.936ENSXCOG00000002898-8257.529
ENSXCOG00000006553-8749.438ENSXCOG00000003451-9148.558
ENSXCOG00000006553-8257.895ENSXCOG00000007420-9557.895
ENSXCOG00000006553-9648.364ENSXCOG00000002512-8648.364
ENSXCOG00000006553-9540.127ENSXCOG00000008056-5840.127
ENSXCOG00000006553-8350.000ENSXCOG00000015435-8553.659
ENSXCOG00000006553-9138.889ENSXCOG00000013504znf384l5639.437
ENSXCOG00000006553-8439.048ENSXCOG00000018615-8639.048
ENSXCOG00000006553-8541.634ENSXCOG00000008567prdm57841.634
ENSXCOG00000006553-9251.331ENSXCOG00000001226-9751.331
ENSXCOG00000006553-8946.078ENSXCOG00000002869-6141.353
ENSXCOG00000006553-7831.731ENSXCOG00000006699hinfp6731.731
ENSXCOG00000006553-8637.339ENSXCOG00000013066-8737.339
ENSXCOG00000006553-9553.282ENSXCOG00000009003-9554.264
ENSXCOG00000006553-8553.763ENSXCOG00000000254-7553.763
ENSXCOG00000006553-9641.739ENSXCOG00000003484-7141.739
ENSXCOG00000006553-8943.103ENSXCOG00000001645si:dkey-89b17.47333.086
ENSXCOG00000006553-8835.798ENSXCOG00000007499zbtb416035.798
ENSXCOG00000006553-9046.416ENSXCOG00000016567-7549.810
ENSXCOG00000006553-8549.213ENSXCOG00000015312-8649.213
ENSXCOG00000006553-9446.429ENSXCOG00000018253-9446.429
ENSXCOG00000006553-9449.231ENSXCOG00000012458-6949.231
ENSXCOG00000006553-8454.902ENSXCOG00000008978-9254.902
ENSXCOG00000006553-9646.552ENSXCOG00000007413-7546.552
ENSXCOG00000006553-8951.667ENSXCOG00000007414-9351.064
ENSXCOG00000006553-9054.864ENSXCOG00000000354-7054.864
ENSXCOG00000006553-9651.751ENSXCOG00000007994-9750.584
ENSXCOG00000006553-8650.439ENSXCOG00000001292-8150.439
ENSXCOG00000006553-8755.367ENSXCOG00000008062-9855.367
ENSXCOG00000006553-9050.000ENSXCOG00000019401-8845.714
ENSXCOG00000006553-8453.876ENSXCOG00000019482-8353.876
ENSXCOG00000006553-8357.143ENSXCOG00000007139-6957.143
ENSXCOG00000006553-8458.442ENSXCOG00000016117-9758.442
ENSXCOG00000006553-9650.435ENSXCOG00000019481-9250.435
ENSXCOG00000006553-9552.229ENSXCOG00000019484-9752.229
ENSXCOG00000006553-8650.206ENSXCOG00000003093-8550.206
ENSXCOG00000006553-8442.593ENSXCOG00000003538-10042.593
ENSXCOG00000006553-8643.774ENSXCOG00000003532-7743.969
ENSXCOG00000006553-9543.077ENSXCOG00000003530-8543.077
ENSXCOG00000006553-9343.350ENSXCOG00000003537-8143.350
ENSXCOG00000006553-9453.696ENSXCOG00000007529-9851.163
ENSXCOG00000006553-9656.028ENSXCOG00000000528-9456.028
ENSXCOG00000006553-8543.439ENSXCOG00000006951-8043.723
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000006553-8646.154ENSACAG00000024898-9846.154Anolis_carolinensis
ENSXCOG00000006553-8551.923ENSACAG00000024956-7751.923Anolis_carolinensis
ENSXCOG00000006553-9452.747ENSACAG00000008664-6752.747Anolis_carolinensis
ENSXCOG00000006553-8548.230ENSAMXG00000010805-9448.230Astyanax_mexicanus
ENSXCOG00000006553-8748.705ENSAMXG00000032841-7748.705Astyanax_mexicanus
ENSXCOG00000006553-9548.276ENSAMXG00000042784-9349.558Astyanax_mexicanus
ENSXCOG00000006553-8546.565ENSAMXG00000038325-9646.565Astyanax_mexicanus
ENSXCOG00000006553-8751.131ENSAMXG00000034847-8251.131Astyanax_mexicanus
ENSXCOG00000006553-8649.020ENSAMXG00000042746-9349.020Astyanax_mexicanus
ENSXCOG00000006553-8850.000ENSAMXG00000036233-8050.000Astyanax_mexicanus
ENSXCOG00000006553-9345.133ENSAMXG00000034344-7945.133Astyanax_mexicanus
ENSXCOG00000006553-8649.020ENSAMXG00000038536-9349.020Astyanax_mexicanus
ENSXCOG00000006553-8552.066ENSAMXG00000038636-9352.066Astyanax_mexicanus
ENSXCOG00000006553-9644.792ENSAMXG00000035246-7244.792Astyanax_mexicanus
ENSXCOG00000006553-8653.846ENSAMXG00000025452-9353.846Astyanax_mexicanus
ENSXCOG00000006553-8745.000ENSBTAG00000038322-7645.000Bos_taurus
ENSXCOG00000006553-8754.887ENSCPBG00000026433-5554.887Chrysemys_picta_bellii
ENSXCOG00000006553-8442.915ENSCPBG00000008580-7542.915Chrysemys_picta_bellii
ENSXCOG00000006553-8741.085ENSCPBG00000013652-6841.085Chrysemys_picta_bellii
ENSXCOG00000006553-8652.444ENSCPBG00000001526-8152.444Chrysemys_picta_bellii
ENSXCOG00000006553-8846.429ENSCSAVG00000010960-10046.429Ciona_savignyi
ENSXCOG00000006553-8743.842ENSDNOG00000047495-7843.842Dasypus_novemcinctus
ENSXCOG00000006553-9048.913ENSEBUG00000011694-9648.913Eptatretus_burgeri
ENSXCOG00000006553-8652.941ENSEBUG00000008306-7952.941Eptatretus_burgeri
ENSXCOG00000006553-8742.629ENSEBUG00000015837-7042.629Eptatretus_burgeri
ENSXCOG00000006553-8738.367ENSEBUG00000013875-8438.367Eptatretus_burgeri
ENSXCOG00000006553-8750.000ENSEBUG00000011435-8350.000Eptatretus_burgeri
ENSXCOG00000006553-8749.807ENSEBUG00000002075-7749.810Eptatretus_burgeri
ENSXCOG00000006553-8745.560ENSEBUG00000005264-7545.560Eptatretus_burgeri
ENSXCOG00000006553-8752.124ENSEBUG00000012919-7652.124Eptatretus_burgeri
ENSXCOG00000006553-8743.774ENSEBUG00000014717-7143.774Eptatretus_burgeri
ENSXCOG00000006553-8743.500ENSEASG00005004469-6943.500Equus_asinus_asinus
ENSXCOG00000006553-8742.500ENSGMOG00000018506-10042.500Gadus_morhua
ENSXCOG00000006553-8645.669ENSGALG00000049609-5545.669Gallus_gallus
ENSXCOG00000006553-8455.691ENSGALG00000046336-9655.691Gallus_gallus
ENSXCOG00000006553-8847.656ENSGALG00000053507-8247.656Gallus_gallus
ENSXCOG00000006553-8652.308ENSGALG00000055127-6752.308Gallus_gallus
ENSXCOG00000006553-8456.356ENSGALG00000054325-9756.356Gallus_gallus
ENSXCOG00000006553-8554.651ENSGALG00000044069-5554.651Gallus_gallus
ENSXCOG00000006553-8550.376ENSGACG00000006283-7050.376Gasterosteus_aculeatus
ENSXCOG00000006553-8552.308ENSGAGG00000011366-9252.308Gopherus_agassizii
ENSXCOG00000006553-8553.125ENSGAGG00000018885-6553.125Gopherus_agassizii
ENSXCOG00000006553-8652.814ENSGAGG00000011399-8552.814Gopherus_agassizii
ENSXCOG00000006553-8542.570ENSHCOG00000018201-8442.570Hippocampus_comes
ENSXCOG00000006553-8748.936ENSIPUG00000021515-8448.936Ictalurus_punctatus
ENSXCOG00000006553-8753.696ENSIPUG00000015468-7854.023Ictalurus_punctatus
ENSXCOG00000006553-9242.616ENSIPUG00000012109ZN125142.616Ictalurus_punctatus
ENSXCOG00000006553-8449.746ENSJJAG00000023633Zfp6729048.611Jaculus_jaculus
ENSXCOG00000006553-8739.241ENSLACG00000009005-10039.241Latimeria_chalumnae
ENSXCOG00000006553-8649.231ENSLACG00000022211-7749.231Latimeria_chalumnae
ENSXCOG00000006553-8642.169ENSLACG00000005264-9642.169Latimeria_chalumnae
ENSXCOG00000006553-8843.725ENSLOCG00000017864-9843.725Lepisosteus_oculatus
ENSXCOG00000006553-8142.021ENSLOCG00000014210-5041.969Lepisosteus_oculatus
ENSXCOG00000006553-8850.893ENSMGAG00000013362-10050.893Meleagris_gallopavo
ENSXCOG00000006553-8550.254ENSMAUG00000009945Zfp6729148.611Mesocricetus_auratus
ENSXCOG00000006553-8546.512ENSMMOG00000003923-8346.512Mola_mola
ENSXCOG00000006553-8646.332ENSMODG00000001880-7946.332Monodelphis_domestica
ENSXCOG00000006553-9648.289ENSMODG00000010532-9148.289Monodelphis_domestica
ENSXCOG00000006553-8449.746MGP_CAROLIEiJ_G0016391Zfp6729648.889Mus_caroli
ENSXCOG00000006553-8648.148MGP_CAROLIEiJ_G0030502-6248.148Mus_caroli
ENSXCOG00000006553-8848.971ENSMUSG000000308239130019O22Rik6848.971Mus_musculus
ENSXCOG00000006553-8449.746MGP_SPRETEiJ_G0017233Zfp6729646.667Mus_spretus
ENSXCOG00000006553-8646.502MGP_SPRETEiJ_G0031613-8447.739Mus_spretus
ENSXCOG00000006553-8845.556ENSNGAG00000015777Zim16345.556Nannospalax_galili
ENSXCOG00000006553-8540.496ENSNBRG00000007276-6840.496Neolamprologus_brichardi
ENSXCOG00000006553-8442.723ENSNBRG00000000708-8742.723Neolamprologus_brichardi
ENSXCOG00000006553-8450.000ENSORLG00020001922-8546.457Oryzias_latipes_hni
ENSXCOG00000006553-7950.000ENSOMEG00000001598-6250.000Oryzias_melastigma
ENSXCOG00000006553-8553.125ENSPSIG00000006790-8853.125Pelodiscus_sinensis
ENSXCOG00000006553-8747.783ENSPSIG00000003152-7947.783Pelodiscus_sinensis
ENSXCOG00000006553-9551.584ENSPSIG00000005672-7753.138Pelodiscus_sinensis
ENSXCOG00000006553-8751.528ENSPSIG00000010328-6651.528Pelodiscus_sinensis
ENSXCOG00000006553-9048.649ENSPSIG00000012650-7748.649Pelodiscus_sinensis
ENSXCOG00000006553-9358.846ENSPSIG00000013021-7858.846Pelodiscus_sinensis
ENSXCOG00000006553-8944.395ENSPSIG00000006586-9944.255Pelodiscus_sinensis
ENSXCOG00000006553-8755.797ENSPSIG00000005603-6755.797Pelodiscus_sinensis
ENSXCOG00000006553-8755.385ENSPSIG00000004502-6355.385Pelodiscus_sinensis
ENSXCOG00000006553-8958.462ENSPSIG00000010248-6758.462Pelodiscus_sinensis
ENSXCOG00000006553-8652.752ENSPSIG00000000672-9752.752Pelodiscus_sinensis
ENSXCOG00000006553-8650.763ENSPSIG00000016380-7250.763Pelodiscus_sinensis
ENSXCOG00000006553-8455.769ENSPSIG00000015459-7355.769Pelodiscus_sinensis
ENSXCOG00000006553-9644.061ENSPREG00000002642-9944.061Poecilia_reticulata
ENSXCOG00000006553-8552.020ENSPNAG00000018395-5952.020Pygocentrus_nattereri
ENSXCOG00000006553-8650.538ENSPNAG00000000088-8650.538Pygocentrus_nattereri
ENSXCOG00000006553-8449.746ENSRNOG00000002713Zfp6729348.611Rattus_norvegicus
ENSXCOG00000006553-8646.332ENSSHAG00000018106-7546.332Sarcophilus_harrisii
ENSXCOG00000006553-9745.627ENSSFOG00015019818-7445.349Scleropages_formosus
ENSXCOG00000006553-8443.439ENSSMAG00000004252-9138.811Scophthalmus_maximus
ENSXCOG00000006553-8551.807ENSSPUG00000004366-5849.770Sphenodon_punctatus
ENSXCOG00000006553-8748.344ENSSPUG00000010016-9248.804Sphenodon_punctatus
ENSXCOG00000006553-8454.545ENSSPAG00000021653-7954.545Stegastes_partitus
ENSXCOG00000006553-8457.407ENSTGUG00000018351-9957.407Taeniopygia_guttata
ENSXCOG00000006553-8553.125ENSTGUG00000015210-10053.125Taeniopygia_guttata
ENSXCOG00000006553-8450.794ENSTRUG00000022066-8850.794Takifugu_rubripes
ENSXCOG00000006553-9346.957ENSXETG00000031192-10046.957Xenopus_tropicalis
ENSXCOG00000006553-8445.455ENSXMAG00000026680-8345.455Xiphophorus_maculatus

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