EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000006581 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 15083 bases
Position: chrKQ557206.1:5226080-5241162
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000008599	PARP	PF00644.20	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000008705	-	1512	-	ENSXCOP00000008599	503 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000006581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000006581's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000006581	-	85	43.017	ENSXCOG00000014707	-	89	34.211
ENSXCOG00000006581	-	90	47.552	ENSXCOG00000012535	-	52	47.552

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000006581	-	87	54.237	ENSAPOG00000021642	-	69	54.237	Acanthochromis_polyacanthus
ENSXCOG00000006581	-	65	43.503	ENSAPOG00000007412	-	98	43.503	Acanthochromis_polyacanthus
ENSXCOG00000006581	-	92	41.530	ENSACIG00000003944	si:ch211-219a4.3	87	31.429	Amphilophus_citrinellus
ENSXCOG00000006581	-	93	62.105	ENSAOCG00000017389	-	97	62.105	Amphiprion_ocellaris
ENSXCOG00000006581	-	50	43.243	ENSAOCG00000002980	-	95	43.243	Amphiprion_ocellaris
ENSXCOG00000006581	-	88	43.169	ENSAPEG00000003700	-	64	43.169	Amphiprion_percula
ENSXCOG00000006581	-	95	72.959	ENSAPEG00000001687	-	97	68.485	Amphiprion_percula
ENSXCOG00000006581	-	83	40.541	ENSAPEG00000003728	-	57	40.541	Amphiprion_percula
ENSXCOG00000006581	-	88	44.385	ENSATEG00000002598	-	61	44.385	Anabas_testudineus
ENSXCOG00000006581	-	87	42.703	ENSATEG00000002587	-	53	42.703	Anabas_testudineus
ENSXCOG00000006581	-	83	42.162	ENSACLG00000013116	-	60	42.162	Astatotilapia_calliptera
ENSXCOG00000006581	-	71	30.504	ENSACLG00000013093	-	96	30.504	Astatotilapia_calliptera
ENSXCOG00000006581	-	92	35.000	ENSACLG00000005418	-	99	35.000	Astatotilapia_calliptera
ENSXCOG00000006581	-	100	66.376	ENSACLG00000001129	-	68	59.375	Astatotilapia_calliptera
ENSXCOG00000006581	-	77	34.426	ENSAMXG00000043329	-	59	34.426	Astyanax_mexicanus
ENSXCOG00000006581	-	99	46.774	ENSBTAG00000016656	PARP14	52	37.853	Bos_taurus
ENSXCOG00000006581	-	84	37.654	ENSCSEG00000017936	si:ch211-219a4.3	82	30.685	Cynoglossus_semilaevis
ENSXCOG00000006581	-	85	55.556	ENSCSEG00000020071	-	90	55.556	Cynoglossus_semilaevis
ENSXCOG00000006581	-	87	43.243	ENSDARG00000099377	si:cabz01030277.1	53	43.243	Danio_rerio
ENSXCOG00000006581	-	99	31.897	ENSEBUG00000002611	-	77	31.897	Eptatretus_burgeri
ENSXCOG00000006581	-	99	84.513	ENSFHEG00000008557	-	57	59.292	Fundulus_heteroclitus
ENSXCOG00000006581	-	99	34.715	ENSGMOG00000011231	-	62	34.715	Gadus_morhua
ENSXCOG00000006581	-	99	42.778	ENSGAFG00000009879	si:ch211-219a4.3	56	42.778	Gambusia_affinis
ENSXCOG00000006581	-	89	37.500	ENSGAFG00000002533	-	97	37.500	Gambusia_affinis
ENSXCOG00000006581	-	94	90.708	ENSGAFG00000001814	-	88	92.857	Gambusia_affinis
ENSXCOG00000006581	-	87	68.595	ENSGAFG00000001802	-	77	68.595	Gambusia_affinis
ENSXCOG00000006581	-	99	62.946	ENSGACG00000018943	-	63	62.946	Gasterosteus_aculeatus
ENSXCOG00000006581	-	85	49.194	ENSGACG00000002353	si:ch211-219a4.3	99	34.211	Gasterosteus_aculeatus
ENSXCOG00000006581	-	90	32.787	ENSHBUG00000005369	-	89	32.787	Haplochromis_burtoni
ENSXCOG00000006581	-	100	65.502	ENSHBUG00000018235	-	69	62.745	Haplochromis_burtoni
ENSXCOG00000006581	-	94	68.803	ENSKMAG00000016827	-	65	67.990	Kryptolebias_marmoratus
ENSXCOG00000006581	-	94	50.829	ENSLOCG00000000239	si:cabz01030277.1	62	50.829	Lepisosteus_oculatus
ENSXCOG00000006581	-	90	46.763	ENSMZEG00005025678	si:ch211-219a4.3	93	33.929	Maylandia_zebra
ENSXCOG00000006581	-	99	34.000	ENSMZEG00005025708	-	85	34.000	Maylandia_zebra
ENSXCOG00000006581	-	89	46.067	ENSMZEG00005026601	-	89	46.067	Maylandia_zebra
ENSXCOG00000006581	-	81	42.069	ENSMMOG00000005277	-	50	42.069	Mola_mola
ENSXCOG00000006581	-	61	30.671	ENSNBRG00000003877	-	88	30.671	Neolamprologus_brichardi
ENSXCOG00000006581	-	86	60.784	ENSNBRG00000005232	-	69	60.784	Neolamprologus_brichardi
ENSXCOG00000006581	-	94	45.000	ENSONIG00000012986	-	65	45.000	Oreochromis_niloticus
ENSXCOG00000006581	-	89	32.727	ENSONIG00000017776	-	92	32.727	Oreochromis_niloticus
ENSXCOG00000006581	-	99	32.456	ENSONIG00000004517	-	99	32.456	Oreochromis_niloticus
ENSXCOG00000006581	-	93	66.480	ENSONIG00000007870	-	59	66.480	Oreochromis_niloticus
ENSXCOG00000006581	-	91	40.541	ENSORLG00000007845	-	57	40.541	Oryzias_latipes
ENSXCOG00000006581	-	80	44.371	ENSORLG00015021971	si:ch211-219a4.3	88	32.240	Oryzias_latipes_hsok
ENSXCOG00000006581	-	91	30.833	ENSOMEG00000016395	-	97	30.833	Oryzias_melastigma
ENSXCOG00000006581	-	91	33.636	ENSOMEG00000016380	-	89	33.636	Oryzias_melastigma
ENSXCOG00000006581	-	90	37.736	ENSOMEG00000016369	-	90	37.736	Oryzias_melastigma
ENSXCOG00000006581	-	100	63.128	ENSOMEG00000022143	-	65	63.128	Oryzias_melastigma
ENSXCOG00000006581	-	94	43.709	ENSOMEG00000019715	si:ch211-219a4.3	94	32.456	Oryzias_melastigma
ENSXCOG00000006581	-	84	40.331	ENSPKIG00000004027	-	52	40.331	Paramormyrops_kingsleyae
ENSXCOG00000006581	-	93	57.627	ENSPMGG00000004482	-	89	58.929	Periophthalmus_magnuspinnatus
ENSXCOG00000006581	-	96	43.939	ENSPMAG00000002848	-	51	43.939	Petromyzon_marinus
ENSXCOG00000006581	-	89	30.808	ENSPMAG00000008296	-	64	30.808	Petromyzon_marinus
ENSXCOG00000006581	-	94	90.708	ENSPFOG00000000012	-	62	69.863	Poecilia_formosa
ENSXCOG00000006581	-	99	44.693	ENSPFOG00000016743	si:ch211-219a4.3	81	41.706	Poecilia_formosa
ENSXCOG00000006581	-	91	68.644	ENSPFOG00000023812	-	63	68.644	Poecilia_formosa
ENSXCOG00000006581	-	60	30.492	ENSPLAG00000004362	-	89	30.492	Poecilia_latipinna
ENSXCOG00000006581	-	94	90.708	ENSPMEG00000004328	-	54	72.660	Poecilia_mexicana
ENSXCOG00000006581	-	72	54.032	ENSPREG00000019242	-	64	54.472	Poecilia_reticulata
ENSXCOG00000006581	-	89	35.780	ENSPREG00000003560	-	96	35.780	Poecilia_reticulata
ENSXCOG00000006581	-	77	53.191	ENSPREG00000019182	-	55	53.191	Poecilia_reticulata
ENSXCOG00000006581	-	51	78.182	ENSPREG00000007470	-	95	78.182	Poecilia_reticulata
ENSXCOG00000006581	-	99	91.593	ENSPREG00000007508	-	66	86.567	Poecilia_reticulata
ENSXCOG00000006581	-	75	31.026	ENSPNYG00000001714	-	92	39.153	Pundamilia_nyererei
ENSXCOG00000006581	-	92	33.929	ENSPNYG00000013937	-	93	33.929	Pundamilia_nyererei
ENSXCOG00000006581	-	89	46.067	ENSPNYG00000021378	-	89	46.067	Pundamilia_nyererei
ENSXCOG00000006581	-	73	30.189	ENSPNYG00000021303	-	98	30.189	Pundamilia_nyererei
ENSXCOG00000006581	-	82	41.667	ENSSFOG00015001605	-	63	41.667	Scleropages_formosus
ENSXCOG00000006581	-	84	46.296	ENSSFOG00015012828	-	81	46.296	Scleropages_formosus
ENSXCOG00000006581	-	78	43.169	ENSSDUG00000007576	-	54	43.169	Seriola_dumerili
ENSXCOG00000006581	-	99	67.337	ENSSDUG00000001575	-	82	54.902	Seriola_dumerili
ENSXCOG00000006581	-	99	66.834	ENSSLDG00000005702	-	98	70.238	Seriola_lalandi_dorsalis
ENSXCOG00000006581	-	98	32.624	ENSTRUG00000004579	-	94	32.624	Takifugu_rubripes
ENSXCOG00000006581	-	76	30.435	ENSTNIG00000008883	-	93	30.435	Tetraodon_nigroviridis
ENSXCOG00000006581	-	71	32.778	ENSUAMG00000004120	-	78	32.778	Ursus_americanus
ENSXCOG00000006581	-	92	42.424	ENSXETG00000023400	-	69	42.424	Xenopus_tropicalis
ENSXCOG00000006581	-	87	43.716	ENSXETG00000023401	-	50	43.716	Xenopus_tropicalis
ENSXCOG00000006581	-	97	74.576	ENSXMAG00000024189	-	69	74.576	Xiphophorus_maculatus
ENSXCOG00000006581	-	84	41.209	ENSXMAG00000001866	-	58	41.209	Xiphophorus_maculatus